Version 1.9.0.dev59+ged933b8d9 (development) (2024-10-03)#

Dependencies#

- Minimum supported dependencies were updated in accordance with SPEC0, most notably Python 3.10+ is now required. (#12798)
Importing from mne.decoding now explicitly requires scikit-learn to be installed, by Eric Larson. (#12834)

Fix handling of MRI file-path in mne.SourceSpaces and safeguard saving of pathlib.Path with h5io by casting to str, by Mathieu Scheltienne. (#12803)
Cast fwd["info"] to Info and fwd["src"] to SourceSpaces when loading a forward solution from an HDF5 file, by Mathieu Scheltienne. (#12804)
Fix bug where mne.Epochs.compute_tfr() could not be used with the multitaper method and complex or phase outputs, by Thomas Binns. (#12842)
Fixed a bug where split FIF files that were read and then appended to other mne.io.Raw instances had their BAD boundary annotations incorrectly offset in samples by the number of split files, by Eric Larson. (#12843)
Enforce SI units for Eyetracking data (eyegaze data should be radians of visual angle, not pixels. Pupil size data should be meters). Updated tutorials so demonstrate how to convert data to SI units before analyses, by Scott Huberty. (#12846)
Prevent the colorbar parameter being ignored in topomap plots such as mne.time_frequency.Spectrum.plot_topomap(), by Thomas Binns. (#12853)
Fix bug where invalid data types (e.g., np.ndarray``s) could be used in some :class:`mne.io.Info` fields like ``info["subject_info"]["weight"], by Eric Larson. (#12875)
When creating a SpectrumArray, the array shape check now compares against the total of both ‘good’ and ‘bad’ channels in the provided Info (previously only good channels were checked), by Mathieu Scheltienne. (#12877)

Deprecate average parameter in plot_filters and plot_patterns methods of the mne.decoding.CSP and mne.decoding.SPoC classes, by Thomas Binns. (#12829)

Add support for dict type argument ref_channels to mne.set_eeg_reference(), to allow flexible re-referencing (e.g. raw.set_eeg_reference(ref_channels={'A1': ['A2', 'A3']}) will set the new A1 data to be A1 - mean(A2, A3)), by Alex Lepauvre and Qian Chu and Daniel McCloy. (#12366)
Add reader for ANT Neuro files in the *.cnt format with read_raw_ant(), by Mathieu Scheltienne, Eric Larson and Proloy Das. (#12792)
- Add support for a mne.transforms.Transform in the argument trans of the coregistration GUI called with mne.gui.coregistration(), by Mathieu Scheltienne. (#12801)
Added support for sensor_scales to mne.viz.Brain.add_sensors() and mne.viz.plot_alignment(), by new contributor Alex Lepauvre. (#12805)
Raw() and save() now return the path to the saved file(s), by Victor Ferat. (#12811)
mne.channels.read_custom_montage() may now read a newer version of the .elc ASA Electrode file format, by Stefan Appelhoff. (#12830)
Added the title argument to mne.viz.create_3d_figure(), and color and position arguments to mne.viz.set_3d_title(), by Eric Larson. (#12871)

Use custom code in mne.sys_info() to get the amount of physical memory and a more informative CPU name instead of using the psutil package, by Clemens Brunner. (#12787)
Improve documentation clarity of fit_transform methods for mne.decoding.SSD, mne.decoding.CSP, and mne.decoding.SPoC classes, by Thomas Binns. (#12827)
Improve handling of filenames in raw.filenames by using Path instead of str, by Mathieu Scheltienne. (#12843)
Improve automatic figure scaling of mne.viz.plot_events(), and event_id and count overview legend when a high amount of unique events is supplied, by Stefan Appelhoff. (#12844)
mne.preprocessing.ICA.find_bads_muscle() can now be run when passing an inst without sensor positions. However, it will just use the first of three criteria (slope) to find muscle-related ICA components, by Stefan Appelhoff. (#12862)