ChemicalDrift - Transport and fate of organic compounds

from opendrift.readers import reader_netCDF_CF_generic
from opendrift.models.chemicaldrift import ChemicalDrift
from opendrift.readers.reader_constant import Reader as ConstantReader
from datetime import timedelta, datetime
import matplotlib.pyplot as plt
import numpy as np


o = ChemicalDrift(loglevel=0, seed=0)

# Norkyst
reader_norkyst = reader_netCDF_CF_generic.Reader('https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be')
mixed_layer = ConstantReader({'ocean_mixed_layer_thickness': 40})
o.add_reader([reader_norkyst,mixed_layer])

o.set_config('drift:vertical_mixing', True)
o.set_config('vertical_mixing:diffusivitymodel', 'windspeed_Large1994')
o.set_config('chemical:particle_diameter',30.e-6)  # m
o.set_config('chemical:particle_diameter_uncertainty',5.e-6) # m
o.set_config('chemical:sediment:resuspension_critvel',0.15) # m/s
o.set_config('chemical:transformations:volatilization', True)
o.set_config('chemical:transformations:degradation', True)
o.set_config('chemical:transformations:degradation_mode', 'OverallRateConstants')
o.set_config('seed:LMM_fraction',.9)
o.set_config('seed:particle_fraction',.1)
o.set_config('general:coastline_action', 'previous')

o.init_chemical_compound("Phenanthrene")

# Modify half-life times with unrealistic values for this demo
o.set_config('chemical:transformations:t12_W_tot', 6.) # hours
o.set_config('chemical:transformations:t12_S_tot', 12.) # hours

o.list_configspec()

14:56:39 DEBUG   opendrift.config:168: Adding 18 config items from __init__
14:56:39 DEBUG   opendrift.config:178:   Overwriting config item readers:max_number_of_fails
14:56:39 DEBUG   opendrift.config:168: Adding 13 config items from __init__
14:56:39 INFO    opendrift.models.basemodel:519: OpenDriftSimulation initialised (version 1.11.10 / v1.11.10-15-g65004d9)
14:56:39 DEBUG   opendrift.config:168: Adding 15 config items from oceandrift
14:56:39 DEBUG   opendrift.config:178:   Overwriting config item seed:z
14:56:39 DEBUG   opendrift.config:168: Adding 71 config items from chemicaldrift
14:56:39 INFO    opendrift.readers.reader_netCDF_CF_generic:102: Opening dataset: https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
14:56:45 DEBUG   opendrift.readers.reader_netCDF_CF_generic:119: Finding coordinate variables.
14:56:45 DEBUG   opendrift.readers.reader_netCDF_CF_generic:134: Parsing CF grid mapping dictionary: {'grid_mapping_name': 'polar_stereographic', 'straight_vertical_longitude_from_pole': 70.0, 'latitude_of_projection_origin': 90.0, 'standard_parallel': 60.0, 'false_easting': 3192800.0, 'false_northing': 1784000.0, 'semi_major_axis': 6378137.0, 'semi_minor_axis': 6356752.3142, 'proj4': '+proj=stere +lat_0=90 +lat_ts=60 +lon_0=70 +x_0=3192800 +y_0=1784000 +a=6378137 +b=6356752.3142 +units=m +no_defs +type=crs'}
14:56:45 INFO    opendrift.readers.reader_netCDF_CF_generic:314: Detected dimensions: {'x': 'X', 'y': 'Y', 'z': 'depth', 'time': 'time'}
14:56:45 DEBUG   opendrift.readers.reader_netCDF_CF_generic:350: Skipped variables without standard_name: ['angle', 'tke', 'ubar', 'vbar']
14:56:45 DEBUG   opendrift.readers.basereader.variables:608: Setting buffer size 25 for reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be, assuming a maximum average speed of 5 m/s and time span of 1:00:00
14:56:45 DEBUG   opendrift.readers.basereader:176: Variable mapping: ['sea_floor_depth_below_sea_level'] -> ['land_binary_mask'] is not activated
14:56:45 DEBUG   opendrift.readers.basereader.variables:563: Adding variable mapping: ['x_wind', 'y_wind'] -> wind_speed
14:56:45 DEBUG   opendrift.readers.basereader.variables:563: Adding variable mapping: ['x_sea_water_velocity', 'y_sea_water_velocity'] -> sea_water_speed
14:56:45 DEBUG   opendrift.readers.basereader:176: Variable mapping: ['sea_floor_depth_below_sea_level'] -> ['land_binary_mask'] is not activated
14:56:45 DEBUG   opendrift.models.basemodel.environment:328: Added reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
14:56:45 DEBUG   opendrift.models.basemodel.environment:328: Added reader constant_reader
environment:constant:x_sea_water_velocity [None] float min: -15, max: 15 [m/s] Component of ocean c...
environment:fallback:x_sea_water_velocity [None] float min: -15, max: 15 [m/s] Component of ocean c...
environment:constant:y_sea_water_velocity [None] float min: -15, max: 15 [m/s] Component of ocean c...
environment:fallback:y_sea_water_velocity [None] float min: -15, max: 15 [m/s] Component of ocean c...
environment:constant:sea_surface_height [None] float min: None, max: None [None] Use constant value f...
environment:fallback:sea_surface_height [0] float min: None, max: None [None] Fallback value for s...
environment:constant:x_wind         [None] float min: -50, max: 50 [m/s] Component of wind al...
environment:fallback:x_wind         [0] float min: -50, max: 50 [m/s] Component of wind al...
environment:constant:y_wind         [None] float min: -50, max: 50 [m/s] Component of wind al...
environment:fallback:y_wind         [0] float min: -50, max: 50 [m/s] Component of wind al...
environment:constant:land_binary_mask [None] float min: 0, max: 1 [None] 1 is land, 0 is sea...
environment:fallback:land_binary_mask [None] float min: 0, max: 1 [None] 1 is land, 0 is sea...
environment:constant:sea_floor_depth_below_sea_level [None] float min: -20, max: 12000 [None] Depth of seafloor...
environment:fallback:sea_floor_depth_below_sea_level [10000] float min: -20, max: 12000 [None] Depth of seafloor...
environment:constant:ocean_vertical_diffusivity [None] float min: 0, max: 1 [None] Use constant value f...
environment:fallback:ocean_vertical_diffusivity [0.0001] float min: 0, max: 1 [None] Fallback value for o...
environment:constant:sea_water_temperature [None] float min: None, max: None [None] Use constant value f...
environment:fallback:sea_water_temperature [10] float min: None, max: None [None] Fallback value for s...
environment:constant:sea_water_salinity [None] float min: None, max: None [None] Use constant value f...
environment:fallback:sea_water_salinity [34] float min: None, max: None [None] Fallback value for s...
environment:constant:upward_sea_water_velocity [None] float min: None, max: None [None] Use constant value f...
environment:fallback:upward_sea_water_velocity [0] float min: None, max: None [None] Fallback value for u...
environment:constant:spm            [None] float min: None, max: None [None] Use constant value f...
environment:fallback:spm            [1] float min: None, max: None [None] Fallback value for s...
environment:constant:ocean_mixed_layer_thickness [None] float min: None, max: None [None] Use constant value f...
environment:fallback:ocean_mixed_layer_thickness [50] float min: None, max: None [None] Fallback value for o...
environment:constant:active_sediment_layer_thickness [None] float min: None, max: None [None] Use constant value f...
environment:fallback:active_sediment_layer_thickness [0.03] float min: None, max: None [None] Fallback value for a...
environment:constant:doc            [None] float min: None, max: None [None] Use constant value f...
environment:fallback:doc            [0.0] float min: None, max: None [None] Fallback value for d...
environment:constant:sea_water_ph_reported_on_total_scale [None] float min: None, max: None [None] Use constant value f...
environment:fallback:sea_water_ph_reported_on_total_scale [8.1] float min: None, max: None [None] Fallback value for s...
environment:constant:pH_sediment    [None] float min: None, max: None [None] Use constant value f...
environment:fallback:pH_sediment    [6.9] float min: None, max: None [None] Fallback value for p...
general:use_auto_landmask           [True] bool   A built-in GSHHG glo...
drift:current_uncertainty           [0] float min: 0, max: 5 [m/s] Add gaussian perturb...
drift:current_uncertainty_uniform   [0] float min: 0, max: 5 [m/s] Add gaussian perturb...
drift:max_speed                     [2.0] float min: 0, max: inf [seconds] Typical maximum spee...
readers:max_number_of_fails         [1] int   min: 0, max: 1000000.0 [number] Readers are discarde...
general:simulation_name             [] str   min length 0, max length 64 Name of simulation...
general:coastline_action            [previous] enum  ['none', 'stranding', 'previous'] None means that obje...
general:coastline_approximation_precision [None] float min: 0.0001, max: 0.005 [degrees] The precision of the...
general:time_step_minutes           [60] float min: 0.01, max: 1440 [minutes] Calculation time ste...
general:time_step_output_minutes    [None] float min: 1, max: 1440 [minutes] Output time step, i....
seed:ocean_only                     [True] bool   If True, elements se...
seed:number                         [1] int   min: 1, max: 100000000 [1] The number of elemen...
drift:max_age_seconds               [None] float min: 0, max: inf [seconds] Elements will be dea...
drift:advection_scheme              [euler] enum  ['euler', 'runge-kutta', 'runge-kutta4'] Numerical advection ...
drift:horizontal_diffusivity        [0] float min: 0, max: 100000 [m2/s] Add horizontal diffu...
drift:profiles_depth                [50] float min: 0, max: None [meters] Environment profiles...
drift:wind_uncertainty              [0] float min: 0, max: 5 [m/s] Add gaussian perturb...
drift:relative_wind                 [False] bool   If True, wind drift ...
drift:deactivate_north_of           [None] float min: -90, max: 90 [degrees] Elements are deactiv...
drift:deactivate_south_of           [None] float min: -90, max: 90 [degrees] Elements are deactiv...
drift:deactivate_east_of            [None] float min: -360, max: 360 [degrees] Elements are deactiv...
drift:deactivate_west_of            [None] float min: -360, max: 360 [degrees] Elements are deactiv...
seed:origin_marker                  [0] float min: None, max: None [None] An integer kept cons...
seed:z                              [0] float min: -10000, max: 0 [m] Depth below sea leve...
seed:wind_drift_factor              [0.02] float min: None, max: None [1] Elements at surface ...
seed:current_drift_factor           [1] float min: None, max: None [1] Elements are moved w...
seed:terminal_velocity              [0.0] float min: None, max: None [m/s] Terminal rise/sinkin...
seed:diameter                       [0.0] float min: None, max: None [m] Seeding value of dia...
seed:density                        [2650.0] float min: None, max: None [kg/m^3] Seeding value of den...
seed:specie                         [0] float min: None, max: None [] Seeding value of spe...
seed:mass                           [1000.0] float min: None, max: None [ug] Seeding value of mas...
seed:mass_degraded                  [0] float min: None, max: None [ug] Seeding value of mas...
seed:mass_degraded_water            [0] float min: None, max: None [ug] Seeding value of mas...
seed:mass_degraded_sediment         [0] float min: None, max: None [ug] Seeding value of mas...
seed:mass_volatilized               [0] float min: None, max: None [ug] Seeding value of mas...
drift:vertical_advection            [True] bool   Advect elements with...
drift:vertical_mixing               [True] bool   Activate vertical mi...
vertical_mixing:timestep            [60] float min: 0.1, max: 3600 [seconds] Time step used for i...
vertical_mixing:diffusivitymodel    [windspeed_Large1994] enum  ['environment', 'stepfunction', 'windspeed_Sundby1983', 'windspeed_Large1994', 'gls_tke', 'constant'] Algorithm/source use...
vertical_mixing:background_diffusivity [1.2e-05] float min: 0, max: 1 [m2s-1] Background diffusivi...
vertical_mixing:TSprofiles          [False] bool   Update T and S profi...
drift:wind_drift_depth              [0.1] float min: 0, max: 10 [meters] The direct wind drif...
drift:stokes_drift                  [True] bool   Advection elements w...
drift:stokes_drift_profile          [Phillips] enum  ['monochromatic', 'exponential', 'Phillips', 'windsea_swell'] Algorithm to calcula...
drift:use_tabularised_stokes_drift  [False] bool   If True, Stokes drif...
drift:tabularised_stokes_drift_fetch [25000] enum  ['5000', '25000', '50000'] The fetch length whe...
general:seafloor_action             [lift_to_seafloor] enum  ['none', 'lift_to_seafloor', 'deactivate', 'previous'] "deactivate": elemen...
drift:truncate_ocean_model_below_m  [None] float min: 0, max: 10000 [m] Ocean model data are...
seed:seafloor                       [False] bool   Elements are seeded ...
chemical:transfer_setup             [organics] enum  ['Sandnesfj_Al', 'metals', '137Cs_rev', 'custom', 'organics'] ...
chemical:dynamic_partitioning       [True] bool   Toggle dynamic parti...
chemical:slowly_fraction            [False] bool   ...
chemical:irreversible_fraction      [False] bool   ...
chemical:dissolved_diameter         [0] float min: 0, max: 0.0001 [m] ...
chemical:particle_diameter          [3e-05] float min: 0, max: 0.0001 [m] ...
chemical:particle_concentration_half_depth [20] float min: 0, max: 100 [m] ...
chemical:doc_concentration_half_depth [1000] float min: 0, max: 1000 [m] ...
chemical:particle_diameter_uncertainty [5e-06] float min: 0, max: 0.0001 [m] ...
seed:LMM_fraction                   [0.9] float min: 0, max: 1 [] ...
seed:particle_fraction              [0.1] float min: 0, max: 1 [] ...
chemical:species:LMM                [True] bool   Toggle LMM species...
chemical:species:LMMcation          [False] bool   ...
chemical:species:LMManion           [False] bool   ...
chemical:species:Colloid            [False] bool   ...
chemical:species:Humic_colloid      [False] bool   ...
chemical:species:Polymer            [False] bool   ...
chemical:species:Particle_reversible [True] bool   ...
chemical:species:Particle_slowly_reversible [False] bool   ...
chemical:species:Particle_irreversible [False] bool   ...
chemical:species:Sediment_reversible [True] bool   ...
chemical:species:Sediment_slowly_reversible [False] bool   ...
chemical:species:Sediment_irreversible [False] bool   ...
chemical:transformations:Kd         [2.0] float min: 0, max: 1000000000.0 [m3/kg] ...
chemical:transformations:S0         [0.0] float min: 0, max: 100 [PSU] parameter controllin...
chemical:transformations:Dc         [1.16e-05] float min: 0, max: 1000000.0 [] ...
chemical:transformations:slow_coeff [0] float min: 0, max: 1000000.0 [] ...
chemical:transformations:volatilization [True] bool   Chemical is evaporat...
chemical:transformations:degradation [True] bool   Chemical mass is deg...
chemical:transformations:degradation_mode [OverallRateConstants] enum  ['OverallRateConstants'] ...
chemical:transformations:dissociation [nondiss] enum  ['nondiss', 'acid', 'base', 'amphoter'] ...
chemical:transformations:LogKOW     [4.505] float min: -3, max: 10 [Log L/Kg] ...
chemical:transformations:TrefKOW    [25.0] float min: -3, max: 30 [C] ...
chemical:transformations:DeltaH_KOC_Sed [-24900.0] float min: -100000.0, max: 100000.0 [J/mol] ...
chemical:transformations:DeltaH_KOC_DOM [-25900.0] float min: -100000.0, max: 100000.0 [J/mol] ...
chemical:transformations:Setchenow  [0.3026] float min: 0, max: 1 [L/mol] ...
chemical:transformations:pKa_acid   [-1] float min: -1, max: 14 [] ...
chemical:transformations:pKa_base   [-1] float min: -1, max: 14 [] ...
chemical:transformations:KOC_DOM    [-1] float min: -1, max: 10000000000 [L/KgOC] ...
chemical:transformations:KOC_sed    [-1] float min: -1, max: 10000000000 [L/KgOC] ...
chemical:transformations:fOC_SPM    [0.05] float min: 0.01, max: 0.1 [gOC/g] ...
chemical:transformations:fOC_sed    [0.05] float min: 0.01, max: 0.1 [gOC/g] ...
chemical:transformations:aggregation_rate [0] float min: 0, max: 1 [s-1] ...
chemical:transformations:t12_W_tot  [6.0] float min: 1, max: None [hours] half life in water, ...
chemical:transformations:Tref_kWt   [25.0] float min: -3, max: 30 [C] ...
chemical:transformations:DeltaH_kWt [50000.0] float min: -100000.0, max: 100000.0 [J/mol] ...
chemical:transformations:t12_S_tot  [12.0] float min: 1, max: None [hours] half life in sedimen...
chemical:transformations:Tref_kSt   [25.0] float min: -3, max: 30 [C] ...
chemical:transformations:DeltaH_kSt [50000.0] float min: -100000.0, max: 100000.0 [J/mol] ...
chemical:transformations:MolWt      [178.226] float min: 50, max: 1000 [amu] molecular weight...
chemical:transformations:Henry      [4.294e-05] float min: None, max: None [atm m3 mol-1] Henry constant...
chemical:transformations:Vpress     [0.0222] float min: None, max: None [Pa] Vapour pressure...
chemical:transformations:Tref_Vpress [25.0] float min: None, max: None [C] Vapour pressure ref ...
chemical:transformations:DeltaH_Vpress [71733.0] float min: -100000.0, max: 115000.0 [J/mol] Enthalpy of volatili...
chemical:transformations:Solub      [1.09] float min: None, max: None [g/m3] Solubility...
chemical:transformations:Tref_Solub [25.0] float min: None, max: None [C] Solubility ref temp...
chemical:transformations:DeltaH_Solub [34800.0] float min: -100000.0, max: 100000.0 [J/mol] Enthalpy of solubili...
chemical:sediment:mixing_depth      [0.03] float min: 0, max: 100 [m] ...
chemical:sediment:density           [2600] float min: 0, max: 10000 [kg/m3] ...
chemical:sediment:effective_fraction [0.9] float min: 0, max: 1 [] ...
chemical:sediment:corr_factor       [0.1] float min: 0, max: 10 [] ...
chemical:sediment:porosity          [0.6] float min: 0, max: 1 [] ...
chemical:sediment:layer_thickness   [1] float min: 0, max: 100 [m] ...
chemical:sediment:desorption_depth  [1] float min: 0, max: 100 [m] ...
chemical:sediment:desorption_depth_uncert [0.5] float min: 0, max: 100 [m] ...
chemical:sediment:resuspension_depth [1] float min: 0, max: 100 [m] ...
chemical:sediment:resuspension_depth_uncert [0.5] float min: 0, max: 100 [m] ...
chemical:sediment:resuspension_critvel [0.15] float min: 0, max: 1 [m/s] ...
chemical:sediment:burial_rate       [3e-05] float min: 0, max: 10 [m/year] ...
chemical:sediment:buried_leaking_rate [0] float min: 0, max: 10 [s-1] ...
chemical:compound                   [Phenanthrene] enum  ['Naphthalene', 'Phenanthrene', 'Fluoranthene', 'Benzo-a-anthracene', 'Benzo-a-pyrene', 'Dibenzo-ah-anthracene', 'C1-Naphthalene', 'Acenaphthene', 'Acenaphthylene', 'Fluorene', 'Dibenzothiophene', 'C2-Naphthalene', 'Anthracene', 'C3-Naphthalene', 'C1-Dibenzothiophene', 'Pyrene', 'C1-Phenanthrene', 'C2-Dibenzothiophene', 'C2-Phenanthrene', 'Benzo-b-fluoranthene', 'Chrysene', 'C3-Dibenzothiophene', 'C3-Phenanthrene', 'Benzo-k-fluoranthene', 'Benzo-ghi-perylene', 'Indeno-123cd-pyrene', 'Copper', 'Cadmium', 'Chromium', 'Lead', 'Vanadium', 'Zinc', 'Nickel', None] ...

Seeding 500 lagrangian elements each representign 2mg og target chemical

td=datetime.today()
time = td - timedelta(days=10)

latseed= 57.6;   lonseed= 10.6 # Skagen

ntraj=500
iniz=np.random.rand(ntraj) * -10. # seeding the chemicals in the upper 10m

o.seed_elements(lonseed, latseed, z=iniz, radius=2000,number=ntraj,time=time, mass=2e3)

56:45 DEBUG   opendrift.models.chemicaldrift:870: Partitioning coefficients (Tref,freshwater)
56:45 DEBUG   opendrift.models.chemicaldrift:871: KOC_sed: 12953.922406542462 L/KgOC
56:45 DEBUG   opendrift.models.chemicaldrift:872: KOC_SPM: 12953.922406542462 L/KgOC
56:45 DEBUG   opendrift.models.chemicaldrift:873: KOC_DOM: 3004.29439651874 L/KgOC
56:45 DEBUG   opendrift.models.chemicaldrift:885: Kd_sed: 647.6961203271231 L/Kg
56:45 DEBUG   opendrift.models.chemicaldrift:886: Kd_SPM: 647.6961203271231 L/Kg
56:45 DEBUG   opendrift.models.chemicaldrift:887: Kd_DOM: 1580.2588525688573 L/Kg
56:45 DEBUG   opendrift.models.chemicaldrift:1104: nspecies: 5
56:45 DEBUG   opendrift.models.chemicaldrift:1105: Transfer rates:
 [[0.00000000e+00 1.75855513e-08 4.62500000e-07 2.88600000e-02
00000000e+00]
 [4.06297347e-06 0.00000000e+00 0.00000000e+00 0.00000000e+00
00000000e+00]
 [9.91290450e-06 0.00000000e+00 0.00000000e+00 0.00000000e+00
00000000e+00]
 [9.91290450e-07 0.00000000e+00 0.00000000e+00 0.00000000e+00
16887646e-11]
 [0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00
00000000e+00]]
56:45 DEBUG   opendrift.models.chemicaldrift:509: Initial partitioning:
56:45 DEBUG   opendrift.models.chemicaldrift:511:       449   0 LMM
56:45 DEBUG   opendrift.models.chemicaldrift:511:         0   1 Humic colloid
56:45 DEBUG   opendrift.models.chemicaldrift:511:        51   2 Particle reversible
56:45 DEBUG   opendrift.models.chemicaldrift:511:         0   3 Sediment reversible
56:45 DEBUG   opendrift.models.chemicaldrift:511:         0   4 Sediment slowly reversible
56:45 INFO    opendrift.models.basemodel.environment:218: Adding a dynamical landmask with max. priority based on assumed maximum speed of 2.0 m/s. Adding a customised landmask may be faster...
56:45 DEBUG   opendrift.readers.basereader:176: Variable mapping: ['sea_floor_depth_below_sea_level'] -> ['land_binary_mask'] is not activated
56:52 DEBUG   opendrift.models.basemodel.environment:328: Added reader global_landmask
56:52 INFO    opendrift.models.basemodel.environment:245: Fallback values will be used for the following variables which have no readers:
56:52 INFO    opendrift.models.basemodel.environment:248:    sea_surface_height: 0.000000
56:52 INFO    opendrift.models.basemodel.environment:248:    ocean_vertical_diffusivity: 0.000100
56:52 INFO    opendrift.models.basemodel.environment:248:    spm: 1.000000
56:52 INFO    opendrift.models.basemodel.environment:248:    active_sediment_layer_thickness: 0.030000
56:52 INFO    opendrift.models.basemodel.environment:248:    doc: 0.000000
56:52 INFO    opendrift.models.basemodel.environment:248:    sea_water_ph_reported_on_total_scale: 8.100000
56:52 INFO    opendrift.models.basemodel.environment:248:    pH_sediment: 6.900000
56:52 DEBUG   opendrift.models.basemodel:95: Changed mode from Mode.Config to Mode.Ready

Running model

o.run(steps=48*2, time_step=1800, time_step_output=1800)

56:52 DEBUG   opendrift.models.basemodel:95: Changed mode from Mode.Ready to Mode.Run
56:52 DEBUG   opendrift.models.basemodel:1782:
------------------------------------------------------
Software and hardware:
  OpenDrift version 1.11.10
  Platform: Linux, 5.15.0-1057-aws
0599250793457 GB memory
processors (x86_64)
  NumPy version 1.26.4
  SciPy version 1.13.1
  Matplotlib version 3.8.4
  NetCDF4 version 1.6.1
  Xarray version 2024.6.0
  ADIOS (adios_db) version 1.1.1
  Copernicusmarine version 1.2.4
  Python version 3.11.6 | packaged by conda-forge | (main, Oct  3 2023, 10:40:35) [GCC 12.3.0]
------------------------------------------------------

56:52 DEBUG   opendrift.models.basemodel:1796: No output file is specified, neglecting export_buffer_length
56:52 DEBUG   opendrift.models.basemodel:1914: Finalizing environment and preparing readers for simulation coverage ([4.69639997080836, 54.43270917325407, 16.516793922624256, 60.761642023034995]) and time (2024-06-21 14:56:45.968543 to 2024-06-23 14:56:45.968543)
56:52 DEBUG   opendrift.models.basemodel.environment:180:    Preparing https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be for extent [4.69639997080836, 54.43270917325407, 16.516793922624256, 60.761642023034995]
56:52 DEBUG   opendrift.readers.basereader.structured:153: Clearing cache for reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be before starting new simulation
56:52 DEBUG   opendrift.readers.basereader.variables:608: Setting buffer size 11 for reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be, assuming a maximum average speed of 2 m/s and time span of 1:00:00
56:52 DEBUG   opendrift.readers.basereader.variables:549: Nothing more to prepare for https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
56:52 DEBUG   opendrift.models.basemodel.environment:180:    Preparing constant_reader for extent [4.69639997080836, 54.43270917325407, 16.516793922624256, 60.761642023034995]
56:52 DEBUG   opendrift.readers.basereader.variables:549: Nothing more to prepare for constant_reader
56:52 DEBUG   opendrift.models.basemodel.environment:180:    Preparing global_landmask for extent [4.69639997080836, 54.43270917325407, 16.516793922624256, 60.761642023034995]
56:52 DEBUG   opendrift.readers.basereader.variables:549: Nothing more to prepare for global_landmask
56:52 INFO    opendrift.models.basemodel:940: Using existing reader for land_binary_mask
56:52 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
56:52 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
56:52 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
56:52 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
56:52 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
56:52 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
56:52 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
56:52 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
56:52 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
56:52 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
56:52 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
56:52 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
56:52 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
56:52 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
56:52 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
56:52 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
56:52 INFO    opendrift.models.basemodel:951: All points are in ocean
56:52 INFO    opendrift.models.chemicaldrift:352: Number of species: 5
56:52 INFO    opendrift.models.chemicaldrift:354:   0 LMM
56:52 INFO    opendrift.models.chemicaldrift:354:   1 Humic colloid
56:52 INFO    opendrift.models.chemicaldrift:354:   2 Particle reversible
56:52 INFO    opendrift.models.chemicaldrift:354:   3 Sediment reversible
56:52 INFO    opendrift.models.chemicaldrift:354:   4 Sediment slowly reversible
56:52 INFO    opendrift.models.chemicaldrift:357: transfer setup: organics
56:52 INFO    opendrift.models.chemicaldrift:359: nspecies: 5
56:52 INFO    opendrift.models.chemicaldrift:360: Transfer rates:
 [[0.00000000e+00 1.75855513e-08 4.62500000e-07 2.88600000e-02
00000000e+00]
 [4.06297347e-06 0.00000000e+00 0.00000000e+00 0.00000000e+00
00000000e+00]
 [9.91290450e-06 0.00000000e+00 0.00000000e+00 0.00000000e+00
00000000e+00]
 [9.91290450e-07 0.00000000e+00 0.00000000e+00 0.00000000e+00
16887646e-11]
 [0.00000000e+00 0.00000000e+00 0.00000000e+00 0.00000000e+00
00000000e+00]]
56:52 DEBUG   opendrift.models.basemodel:895: to be seeded: 500, already seeded 0
56:52 DEBUG   opendrift.models.basemodel:913: Released 500 new elements.
56:52 WARNING opendrift.models.basemodel:734: Seafloor check not being run because environment is missing. This will happen the first time the function is run but if it happens subsequently there is probably a problem.
56:52 DEBUG   opendrift.models.basemodel:2041: ======================================================================
56:52 INFO    opendrift.models.basemodel:2042: 2024-06-21 14:56:45.968543 - step 1 of 96 - 500 active elements (0 deactivated)
56:52 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
56:52 DEBUG   opendrift.models.basemodel:2050: ======================================================================
56:52 DEBUG   opendrift.models.basemodel:2061:               57.546223 <- latitude  -> 57.64813
56:52 DEBUG   opendrift.models.basemodel:2066:               10.507113 <- longitude -> 10.70608
56:52 DEBUG   opendrift.models.basemodel:2071:               -9.98847   <- z ->   -0.046954762
56:52 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
56:52 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
56:52 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
56:52 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
56:52 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
56:52 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
56:52 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
56:52 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
56:52 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-21 14:00:00 (before)
                2024-06-21 15:00:00 (after)
56:56 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
56:56 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
56:56 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
56:56 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
56:56 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
56:56 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_salinity']
56:56 DEBUG   opendrift.readers.basereader.structured:291: Fetched env-block (size 36x35x7) for time before (2024-06-21 14:00:00)
56:58 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
56:58 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
56:58 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
56:58 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
56:58 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
56:58 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_salinity']
56:58 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 36x35x7) for time after (2024-06-21 15:00:00)
56:58 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-21 14:00:00) in space  (linearNDFast)
56:58 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
56:58 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-21 15:00:00) in space  (linearNDFast)
56:58 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
56:58 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-21 14:00:00, weight 0.05) and
                      after (2024-06-21 15:00:00, weight 0.95) in time
56:58 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
56:58 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.4929004930107 and -59.29392585710053 degrees.
56:58 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.4929004930107 and -59.29392585710053 degrees.
56:58 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
56:58 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
56:58 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
56:58 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
56:58 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
56:58 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
56:58 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
56:58 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
56:58 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
56:58 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
56:58 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
56:58 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
56:58 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
56:58 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
56:58 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
56:58 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
56:58 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
56:58 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
56:58 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
56:58 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
56:58 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
56:58 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
56:58 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
56:58 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
56:58 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
56:58 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
56:58 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
56:58 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
56:58 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
56:58 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.0448851 (min) 0.0945516 (max)
56:58 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: 0.00560505 (min) 0.131855 (max)
56:58 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
56:58 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -3.46643 (min) -2.8492 (max)
56:58 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -3.01129 (min) -2.08285 (max)
56:58 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
56:58 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.53077 (min) 23.882 (max)
56:58 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
56:58 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.8458 (min) 15.3899 (max)
56:58 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 27.5756 (min) 30.7846 (max)
56:58 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -1.34496e-05 (min) 6.95253e-05 (max)
56:58 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
56:58 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
56:58 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
56:58 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
56:58 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
56:58 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
56:58 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
56:58 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
56:58 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
56:58 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
56:58 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
56:58 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
/opt/conda/envs/opendrift/lib/python3.11/site-packages/numpy/core/fromnumeric.py:3504: RuntimeWarning: Mean of empty slice.
  return _methods._mean(a, axis=axis, dtype=dtype,
/opt/conda/envs/opendrift/lib/python3.11/site-packages/numpy/core/_methods.py:129: RuntimeWarning: invalid value encountered in divide
  ret = ret.dtype.type(ret / rcount)
56:58 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
56:58 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 1
56:58 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2]
56:58 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0]
56:58 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[0. 0. 0. 0. 0.]
 [0. 0. 0. 0. 0.]
 [1. 0. 0. 0. 0.]
 [0. 0. 0. 0. 0.]
 [0. 0. 0. 0. 0.]]
56:58 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
56:58 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
56:58 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
56:58 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
56:58 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.014989879032121282
56:58 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
56:58 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
56:58 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
56:58 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
56:58 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
56:58 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
56:58 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
56:58 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
56:58 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
56:58 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
56:58 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
56:58 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
56:58 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
56:58 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
56:58 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
56:58 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
56:58 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
56:58 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
56:58 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
56:58 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
56:58 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
56:58 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
56:58 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
56:58 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
56:58 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
56:58 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
56:58 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
56:58 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
56:58 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
56:58 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
56:58 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
56:58 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
56:58 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
56:58 INFO    opendrift.models.chemicaldrift:1861: partitioning: [450, 0, 50, 0, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
56:58 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
56:58 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
56:58 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
56:58 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
56:58 DEBUG   opendrift.models.basemodel:2041: ======================================================================
56:58 INFO    opendrift.models.basemodel:2042: 2024-06-21 15:26:45.968543 - step 2 of 96 - 500 active elements (0 deactivated)
56:58 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
56:58 DEBUG   opendrift.models.basemodel:2050: ======================================================================
56:58 DEBUG   opendrift.models.basemodel:2061:               57.54744417206018 <- latitude  -> 57.64948458010968
56:58 DEBUG   opendrift.models.basemodel:2066:               10.508090315519878 <- longitude -> 10.708002271430793
56:58 DEBUG   opendrift.models.basemodel:2071:               -20.172744655041747   <- z ->   0.0
56:58 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
56:58 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
56:58 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
56:58 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
56:58 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
56:58 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
56:58 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
56:58 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
56:58 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-21 15:00:00 (before)
                2024-06-21 16:00:00 (after)
56:59 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
56:59 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
56:59 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
56:59 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
56:59 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
56:59 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_salinity']
56:59 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 36x35x7) for time after (2024-06-21 16:00:00)
56:59 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-21 15:00:00) in space  (linearNDFast)
56:59 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
56:59 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-21 16:00:00) in space  (linearNDFast)
56:59 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
56:59 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-21 15:00:00, weight 0.55) and
                      after (2024-06-21 16:00:00, weight 0.45) in time
56:59 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
56:59 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.49192075617508 and -59.29200879074411 degrees.
56:59 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.49192075617508 and -59.29200879074411 degrees.
56:59 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
56:59 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
56:59 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
56:59 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
56:59 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
56:59 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
56:59 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
56:59 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
56:59 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
56:59 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
56:59 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
56:59 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
56:59 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
56:59 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
56:59 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
56:59 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
56:59 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
56:59 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
56:59 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
56:59 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
56:59 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
56:59 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
56:59 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
56:59 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
56:59 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
56:59 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
56:59 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
56:59 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
56:59 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
56:59 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.0715282 (min) 0.0974 (max)
56:59 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: 0.00279072 (min) 0.131672 (max)
56:59 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
56:59 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -3.7242 (min) -3.29105 (max)
56:59 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -2.66417 (min) -1.08287 (max)
56:59 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
56:59 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.55483 (min) 23.8972 (max)
56:59 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
56:59 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.6742 (min) 15.4017 (max)
56:59 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 27.5648 (min) 31.4338 (max)
56:59 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -1.70155e-05 (min) 0.000102694 (max)
56:59 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
56:59 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
56:59 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
56:59 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
56:59 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
56:59 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
56:59 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
56:59 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
56:59 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
56:59 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
56:59 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
56:59 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
56:59 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
56:59 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 13
56:59 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 0 0 0 0 2]
56:59 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 3 3 3 3 0]
56:59 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[ 0.  0.  0. 12.  0.]
 [ 0.  0.  0.  0.  0.]
 [ 2.  0.  0.  0.  0.]
 [ 0.  0.  0.  0.  0.]
 [ 0.  0.  0.  0.  0.]]
56:59 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
56:59 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
56:59 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
56:59 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
56:59 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.014908228372393967
56:59 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
56:59 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
56:59 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
56:59 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
56:59 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
56:59 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
56:59 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
56:59 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
56:59 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
56:59 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
56:59 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
56:59 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
56:59 INFO    opendrift.models.chemicaldrift:1861: partitioning: [439, 0, 47, 14, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
56:59 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
56:59 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
56:59 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
56:59 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
56:59 DEBUG   opendrift.models.basemodel:2041: ======================================================================
56:59 INFO    opendrift.models.basemodel:2042: 2024-06-21 15:56:45.968543 - step 3 of 96 - 500 active elements (0 deactivated)
56:59 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
56:59 DEBUG   opendrift.models.basemodel:2050: ======================================================================
56:59 DEBUG   opendrift.models.basemodel:2061:               57.54775248131556 <- latitude  -> 57.651288098784576
56:59 DEBUG   opendrift.models.basemodel:2066:               10.50863552484977 <- longitude -> 10.710076458068723
56:59 DEBUG   opendrift.models.basemodel:2071:               -20.80535194239791   <- z ->   0.0
56:59 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
56:59 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
56:59 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
56:59 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
56:59 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
56:59 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
56:59 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
56:59 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
56:59 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-21 15:00:00 (before)
                2024-06-21 16:00:00 (after)
56:59 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-21 15:00:00) in space  (linearNDFast)
56:59 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
56:59 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-21 16:00:00) in space  (linearNDFast)
56:59 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
56:59 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-21 15:00:00, weight 0.05) and
                      after (2024-06-21 16:00:00, weight 0.95) in time
56:59 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
56:59 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.4913755650223 and -59.289934599329065 degrees.
56:59 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.4913755650223 and -59.289934599329065 degrees.
56:59 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
56:59 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
56:59 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
56:59 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
56:59 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
56:59 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
56:59 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
56:59 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
56:59 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
56:59 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
56:59 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
56:59 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
56:59 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
56:59 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
56:59 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
56:59 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
56:59 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
56:59 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
56:59 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
56:59 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
56:59 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
56:59 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
56:59 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
56:59 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
56:59 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
56:59 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
56:59 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
56:59 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
56:59 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
56:59 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.0669941 (min) 0.0884507 (max)
56:59 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: 0.0251296 (min) 0.138398 (max)
56:59 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
56:59 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -4.20997 (min) -3.63045 (max)
56:59 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -2.17116 (min) 0.0703751 (max)
56:59 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
56:59 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.54887 (min) 23.9074 (max)
56:59 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
56:59 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.675 (min) 15.4125 (max)
56:59 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 27.5335 (min) 31.4429 (max)
56:59 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -2.73103e-05 (min) 6.73282e-05 (max)
56:59 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
56:59 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
56:59 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
56:59 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
56:59 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
56:59 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
56:59 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
56:59 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
56:59 DEBUG   opendrift.models.basemodel:759: Lifting 3 elements to seafloor.
56:59 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
56:59 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
56:59 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
56:59 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
56:59 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 22
56:59 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
56:59 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3]
56:59 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[ 0.  0.  0. 34.  0.]
 [ 0.  0.  0.  0.  0.]
 [ 2.  0.  0.  2.  0.]
 [ 0.  0.  0.  0.  0.]
 [ 0.  0.  0.  0.  0.]]
56:59 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
56:59 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
56:59 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
56:59 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
56:59 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.014421868110914794
56:59 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
56:59 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
56:59 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
56:59 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
56:59 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
56:59 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
56:59 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
56:59 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:618: 20 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
56:59 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
56:59 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
56:59 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
56:59 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
56:59 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
56:59 INFO    opendrift.models.chemicaldrift:1861: partitioning: [417, 0, 44, 39, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
56:59 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
56:59 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
56:59 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
56:59 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
56:59 DEBUG   opendrift.models.basemodel:2041: ======================================================================
56:59 INFO    opendrift.models.basemodel:2042: 2024-06-21 16:26:45.968543 - step 4 of 96 - 500 active elements (0 deactivated)
56:59 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
56:59 DEBUG   opendrift.models.basemodel:2050: ======================================================================
56:59 DEBUG   opendrift.models.basemodel:2061:               57.548971256890844 <- latitude  -> 57.65346378850618
56:59 DEBUG   opendrift.models.basemodel:2066:               10.509492395172362 <- longitude -> 10.711548152140736
56:59 DEBUG   opendrift.models.basemodel:2071:               -21.24913439797838   <- z ->   -0.05354596043148935
56:59 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
56:59 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
56:59 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
56:59 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
56:59 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
56:59 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
56:59 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
56:59 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
56:59 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-21 16:00:00 (before)
                2024-06-21 17:00:00 (after)
57:01 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
57:01 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
57:01 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
57:01 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
57:01 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
57:01 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_salinity']
57:01 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 37x35x7) for time after (2024-06-21 17:00:00)
57:01 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-21 16:00:00) in space  (linearNDFast)
57:01 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:01 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-21 17:00:00) in space  (linearNDFast)
57:01 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:01 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-21 16:00:00, weight 0.55) and
                      after (2024-06-21 17:00:00, weight 0.45) in time
57:01 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:01 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.49051869002987 and -59.288462917984134 degrees.
57:01 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.49051869002987 and -59.288462917984134 degrees.
57:01 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:01 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:01 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:01 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:01 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:01 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:01 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:01 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:01 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:01 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:01 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:01 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:01 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:01 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:01 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:01 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:01 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:01 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:01 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:01 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:01 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:01 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:01 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:01 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:01 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:01 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:01 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:01 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:01 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:01 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.0583609 (min) 0.0896272 (max)
57:01 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: 0.0560762 (min) 0.168318 (max)
57:01 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:01 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -4.12269 (min) -3.65292 (max)
57:01 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -1.73588 (min) -0.128658 (max)
57:01 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:01 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.55711 (min) 23.8751 (max)
57:01 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:01 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.679 (min) 15.4151 (max)
57:01 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 27.537 (min) 31.4259 (max)
57:01 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -4.66732e-05 (min) 4.40407e-05 (max)
57:01 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:01 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:01 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:01 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:01 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:01 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:01 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:01 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:01 DEBUG   opendrift.models.basemodel:759: Lifting 6 elements to seafloor.
57:01 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:01 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:01 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:01 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:01 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 17
57:01 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0]
57:01 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 0 3 3 3 3 3 3 3 3 3 3 3]
57:01 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[ 0.  0.  0. 50.  0.]
 [ 0.  0.  0.  0.  0.]
 [ 3.  0.  0.  5.  0.]
 [ 0.  0.  0.  0.  0.]
 [ 0.  0.  0.  0.  0.]]
57:01 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:01 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:01 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:01 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:01 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.01294972816356164
57:01 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:01 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:01 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:01 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:01 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:01 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:618: 18 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:01 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
57:01 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:01 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:01 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:01 INFO    opendrift.models.chemicaldrift:1861: partitioning: [402, 0, 42, 56, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:01 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:01 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:01 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:01 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:01 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:01 INFO    opendrift.models.basemodel:2042: 2024-06-21 16:56:45.968543 - step 5 of 96 - 500 active elements (0 deactivated)
57:01 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:01 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:01 DEBUG   opendrift.models.basemodel:2061:               57.55045129487754 <- latitude  -> 57.65618414338939
57:01 DEBUG   opendrift.models.basemodel:2066:               10.510274941591543 <- longitude -> 10.712726894911983
57:01 DEBUG   opendrift.models.basemodel:2071:               -21.19578742980957   <- z ->   -0.14540666115945772
57:01 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:01 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:01 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:01 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:01 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:01 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:01 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:01 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:01 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-21 16:00:00 (before)
                2024-06-21 17:00:00 (after)
57:01 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-21 16:00:00) in space  (linearNDFast)
57:01 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:01 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-21 17:00:00) in space  (linearNDFast)
57:01 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:01 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-21 16:00:00, weight 0.05) and
                      after (2024-06-21 17:00:00, weight 0.95) in time
57:01 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:01 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.4897361444976 and -59.28728417007773 degrees.
57:01 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.4897361444976 and -59.28728417007773 degrees.
57:01 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:01 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:01 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:01 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:01 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:01 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:01 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:01 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:01 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:01 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:01 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:01 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:01 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:01 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:01 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:01 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:01 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:01 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:01 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:01 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:01 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:01 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:01 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:01 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:01 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:01 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:01 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:01 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:01 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:01 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.0686586 (min) 0.0831421 (max)
57:01 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: 0.0675189 (min) 0.205934 (max)
57:01 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:01 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -3.98336 (min) -3.51357 (max)
57:01 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -1.31114 (min) -0.172163 (max)
57:01 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:01 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.54762 (min) 23.8052 (max)
57:01 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:01 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.683 (min) 15.4359 (max)
57:01 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 27.55 (min) 31.4337 (max)
57:01 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -4.73269e-05 (min) 6.96258e-05 (max)
57:01 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:01 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:01 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:01 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:01 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:01 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:01 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:01 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:01 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:01 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:01 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:01 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:01 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:01 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 28
57:01 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
57:01 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 0 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3]
57:01 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[ 0.  0.  0. 77.  0.]
 [ 0.  0.  0.  0.  0.]
 [ 4.  0.  0.  6.  0.]
 [ 0.  0.  0.  0.  0.]
 [ 0.  0.  0.  0.  0.]]
57:01 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:01 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:01 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:01 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:01 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.012020644979999882
57:01 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:01 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:01 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:01 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:01 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:01 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:01 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:01 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:01 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:01 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:01 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 9
57:01 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:01 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 9 elements
57:01 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:01 INFO    opendrift.models.chemicaldrift:1861: partitioning: [376, 0, 47, 77, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:01 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:01 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:01 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:01 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:01 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:01 INFO    opendrift.models.basemodel:2042: 2024-06-21 17:26:45.968543 - step 6 of 96 - 500 active elements (0 deactivated)
57:01 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:01 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:01 DEBUG   opendrift.models.basemodel:2061:               57.55222825714672 <- latitude  -> 57.65951243852957
57:01 DEBUG   opendrift.models.basemodel:2066:               10.510783128099996 <- longitude -> 10.71342999559403
57:01 DEBUG   opendrift.models.basemodel:2071:               -21.680480540101687   <- z ->   -0.14666020504116384
57:01 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:01 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:01 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:01 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:01 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:01 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:01 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:01 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:01 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-21 17:00:00 (before)
                2024-06-21 18:00:00 (after)
57:02 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
57:02 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
57:02 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
57:02 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
57:02 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
57:02 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_salinity']
57:02 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 38x34x7) for time after (2024-06-21 18:00:00)
57:02 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-21 17:00:00) in space  (linearNDFast)
57:02 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:02 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-21 18:00:00) in space  (linearNDFast)
57:02 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:02 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-21 17:00:00, weight 0.55) and
                      after (2024-06-21 18:00:00, weight 0.45) in time
57:02 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:02 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48922795029883 and -59.28658106596209 degrees.
57:02 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48922795029883 and -59.28658106596209 degrees.
57:02 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:02 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:02 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:02 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:02 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:02 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:02 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:02 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:02 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:02 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:02 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:02 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:02 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:02 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:02 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:02 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:02 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:02 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:02 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:02 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:02 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:02 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:02 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:02 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:02 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:02 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:02 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:02 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:02 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:02 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.0883896 (min) 0.099624 (max)
57:02 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: 0.0767089 (min) 0.238169 (max)
57:02 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:02 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -3.84809 (min) -3.38542 (max)
57:02 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -1.2421 (min) -0.580971 (max)
57:02 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:02 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.51019 (min) 23.6909 (max)
57:02 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:02 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.6844 (min) 15.4341 (max)
57:02 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 27.5381 (min) 31.4216 (max)
57:02 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -6.27075e-05 (min) 4.5906e-05 (max)
57:02 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:02 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:02 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:02 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:02 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:02 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:02 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:02 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:02 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:02 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:02 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:02 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:02 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:02 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 18
57:02 DEBUG   opendrift.models.chemicaldrift:1452: old species: [3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
57:02 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3]
57:02 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[ 0.  0.  0. 94.  0.]
 [ 0.  0.  0.  0.  0.]
 [ 4.  0.  0.  9.  0.]
 [ 1.  0.  9.  0.  0.]
 [ 0.  0.  0.  0.  0.]]
57:02 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:02 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:02 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:02 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:02 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.011667901949898925
57:02 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:02 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:02 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:02 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:02 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:02 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:02 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 36
57:02 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:02 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 36 elements
57:02 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:02 INFO    opendrift.models.chemicaldrift:1861: partitioning: [360, 0, 82, 58, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:02 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:02 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:02 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:02 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:02 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:02 INFO    opendrift.models.basemodel:2042: 2024-06-21 17:56:45.968543 - step 7 of 96 - 500 active elements (0 deactivated)
57:02 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:02 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:02 DEBUG   opendrift.models.basemodel:2061:               57.55442923418218 <- latitude  -> 57.663361718230554
57:02 DEBUG   opendrift.models.basemodel:2066:               10.510783128099995 <- longitude -> 10.713253733798936
57:02 DEBUG   opendrift.models.basemodel:2071:               -22.40188767192282   <- z ->   -0.23836875326527615
57:02 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:02 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:02 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:02 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:02 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:02 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:02 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:02 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:02 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-21 17:00:00 (before)
                2024-06-21 18:00:00 (after)
57:02 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-21 17:00:00) in space  (linearNDFast)
57:02 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:02 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-21 18:00:00) in space  (linearNDFast)
57:02 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:02 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-21 17:00:00, weight 0.05) and
                      after (2024-06-21 18:00:00, weight 0.95) in time
57:02 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:02 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48922795778641 and -59.28675731793736 degrees.
57:02 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48922795778641 and -59.28675731793736 degrees.
57:02 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:02 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:02 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:02 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:02 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:02 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:02 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:02 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:02 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:02 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:02 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:02 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:02 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:02 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:02 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:02 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:02 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:02 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:02 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:02 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:02 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:02 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:02 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:02 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:02 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:02 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:02 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:02 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:02 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:02 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.0748931 (min) 0.113296 (max)
57:02 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: 0.0852048 (min) 0.265232 (max)
57:02 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:02 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -3.76938 (min) -3.26821 (max)
57:02 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -1.30312 (min) -1.11129 (max)
57:02 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:02 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.51019 (min) 23.5445 (max)
57:02 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:02 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.6854 (min) 15.44 (max)
57:02 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 27.6246 (min) 31.4189 (max)
57:02 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -7.49872e-05 (min) 5.55976e-05 (max)
57:02 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:02 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:02 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:02 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:02 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:02 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:02 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:02 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:02 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:02 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:02 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:02 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:02 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:02 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 16
57:02 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 2 0 0 0 0 0 0 0 0 2 0 0]
57:02 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 0 3 3 3 3 3 3 3 3 0 3 3]
57:02 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 108.   0.]
 [  0.   0.   0.   0.   0.]
 [  6.   0.   0.  10.   0.]
 [  1.   0.  45.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:02 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:02 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:02 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:02 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:02 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.011488432016937163
57:02 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:02 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:02 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:02 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:02 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:02 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:02 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:02 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:02 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:02 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:02 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:02 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:02 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:02 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:02 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:02 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 41
57:02 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:02 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 41 elements
57:02 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:02 INFO    opendrift.models.chemicaldrift:1861: partitioning: [348, 0, 116, 36, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:02 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:02 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:02 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:02 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:02 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:02 INFO    opendrift.models.basemodel:2042: 2024-06-21 18:26:45.968543 - step 8 of 96 - 500 active elements (0 deactivated)
57:02 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:02 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:02 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.66764836776349
57:02 DEBUG   opendrift.models.basemodel:2066:               10.510783128099995 <- longitude -> 10.712528760971944
57:02 DEBUG   opendrift.models.basemodel:2071:               -21.97043766301008   <- z ->   -0.07535118923911244
57:02 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:02 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:02 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:02 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:02 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:02 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:02 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:02 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:02 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-21 18:00:00 (before)
                2024-06-21 19:00:00 (after)
57:04 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
57:04 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
57:04 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
57:04 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
57:04 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
57:04 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_salinity']
57:04 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 39x34x7) for time after (2024-06-21 19:00:00)
57:04 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-21 18:00:00) in space  (linearNDFast)
57:04 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:04 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-21 19:00:00) in space  (linearNDFast)
57:04 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:04 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-21 18:00:00, weight 0.55) and
                      after (2024-06-21 19:00:00, weight 0.45) in time
57:04 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:04 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48922795778641 and -59.287482302611615 degrees.
57:04 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48922795778641 and -59.287482302611615 degrees.
57:04 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:04 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:04 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:04 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:04 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:04 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:04 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:04 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:04 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:04 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:04 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:04 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:04 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:04 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:04 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:04 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:04 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:04 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:04 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:04 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:04 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:04 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:04 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:04 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:04 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:04 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:04 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:04 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:04 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:04 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.0791486 (min) 0.124163 (max)
57:04 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: 0.0857284 (min) 0.283707 (max)
57:04 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:04 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -3.48892 (min) -2.96292 (max)
57:04 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -1.3648 (min) -1.04061 (max)
57:04 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:04 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.51019 (min) 23.371 (max)
57:04 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:04 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.6877 (min) 15.3988 (max)
57:04 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 27.5855 (min) 31.4559 (max)
57:04 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -8.43704e-05 (min) 3.97708e-05 (max)
57:04 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:04 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:04 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:04 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:04 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:04 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:04 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:04 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:04 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:04 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:04 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:04 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:04 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:04 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 15
57:04 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 3 2 0 0 0 2 0 0 0]
57:04 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 0 0 3 3 3 0 3 3 3]
57:04 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 120.   0.]
 [  0.   0.   0.   0.   0.]
 [  8.   0.   0.  15.   0.]
 [  2.   0.  86.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:04 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:04 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:04 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:04 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:04 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.00958663095826031
57:04 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:04 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:04 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:04 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:04 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:04 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:04 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:04 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:04 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:04 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:04 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:04 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:04 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:04 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:04 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:04 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:04 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:04 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:04 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:04 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:04 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:04 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:04 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 34
57:04 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:04 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 34 elements
57:04 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:04 INFO    opendrift.models.chemicaldrift:1861: partitioning: [339, 0, 138, 23, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:04 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:04 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:04 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:04 DEBUG   opendrift.models.basemodel:759: Lifting 3 elements to seafloor.
57:04 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:04 INFO    opendrift.models.basemodel:2042: 2024-06-21 18:56:45.968543 - step 9 of 96 - 500 active elements (0 deactivated)
57:04 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:04 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:04 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.67223360269364
57:04 DEBUG   opendrift.models.basemodel:2066:               10.511140747193581 <- longitude -> 10.712598850646856
57:04 DEBUG   opendrift.models.basemodel:2071:               -22.743418848100607   <- z ->   -0.15094523742595567
57:04 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:04 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:04 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:04 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:04 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:04 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:04 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:04 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:04 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-21 18:00:00 (before)
                2024-06-21 19:00:00 (after)
57:04 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-21 18:00:00) in space  (linearNDFast)
57:04 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:04 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-21 19:00:00) in space  (linearNDFast)
57:04 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:04 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-21 18:00:00, weight 0.05) and
                      after (2024-06-21 19:00:00, weight 0.95) in time
57:04 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:04 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.488870332461254 and -59.28741220081326 degrees.
57:04 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.488870332461254 and -59.28741220081326 degrees.
57:04 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:04 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:04 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:04 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:04 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:04 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:04 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:04 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:04 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:04 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:04 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:04 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:04 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:04 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:04 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:04 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:04 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:04 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:04 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:04 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:04 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:04 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:04 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:04 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:04 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:04 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:04 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:04 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:04 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:04 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.0921125 (min) 0.139678 (max)
57:04 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: 0.0846994 (min) 0.295393 (max)
57:04 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:04 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -3.22552 (min) -2.62692 (max)
57:04 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -1.61874 (min) -0.761622 (max)
57:04 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:04 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.4299 (min) 23.1877 (max)
57:04 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:04 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.6902 (min) 15.3864 (max)
57:04 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 27.6035 (min) 31.4506 (max)
57:04 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -9.61846e-05 (min) 3.21748e-05 (max)
57:04 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:04 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:04 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:04 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:04 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:04 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:04 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:04 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:04 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:04 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:04 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:04 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:04 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:04 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 8
57:04 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0]
57:04 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3]
57:04 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 128.   0.]
 [  0.   0.   0.   0.   0.]
 [  8.   0.   0.  25.   0.]
 [  2.   0. 120.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:04 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:04 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:04 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:04 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:04 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.007949259413722296
57:04 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:04 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:04 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:04 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:04 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:04 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:04 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:04 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:04 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:04 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:618: 18 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:636: 3 elements reached seafloor, interacting with bottom
57:04 DEBUG   opendrift.models.basemodel:759: Lifting 3 elements to seafloor.
57:04 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:04 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:04 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:04 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:04 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:04 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:04 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:618: 19 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:04 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:04 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:04 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:04 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:04 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:04 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:04 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:04 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:04 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:04 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 25
57:04 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:04 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 25 elements
57:04 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:04 INFO    opendrift.models.chemicaldrift:1861: partitioning: [331, 0, 149, 20, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:04 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:04 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:04 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:04 DEBUG   opendrift.models.basemodel:759: Lifting 5 elements to seafloor.
57:04 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:04 INFO    opendrift.models.basemodel:2042: 2024-06-21 19:26:45.968543 - step 10 of 96 - 500 active elements (0 deactivated)
57:04 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:04 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:04 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.67700769753314
57:04 DEBUG   opendrift.models.basemodel:2066:               10.511573304473893 <- longitude -> 10.712691455415351
57:04 DEBUG   opendrift.models.basemodel:2071:               -22.15668151954495   <- z ->   -0.03059060853560258
57:04 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:04 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:04 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:04 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:04 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:04 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:04 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:04 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:04 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-21 19:00:00 (before)
                2024-06-21 20:00:00 (after)
57:06 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
57:06 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
57:06 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
57:06 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
57:06 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
57:06 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_salinity']
57:06 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 41x33x7) for time after (2024-06-21 20:00:00)
57:06 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-21 19:00:00) in space  (linearNDFast)
57:06 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:06 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-21 20:00:00) in space  (linearNDFast)
57:06 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:06 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-21 19:00:00, weight 0.55) and
                      after (2024-06-21 20:00:00, weight 0.45) in time
57:06 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:06 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.488437778976206 and -59.287319609497594 degrees.
57:06 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.488437778976206 and -59.287319609497594 degrees.
57:06 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:06 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:06 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:06 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:06 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:06 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:06 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:06 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:06 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:06 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:06 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:06 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:06 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:06 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:06 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:06 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:06 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:06 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:06 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:06 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:06 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:06 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:06 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:06 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:06 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:06 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:06 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:06 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:06 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:06 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.106479 (min) 0.148608 (max)
57:06 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: 0.081615 (min) 0.311433 (max)
57:06 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:06 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -2.63456 (min) -2.31399 (max)
57:06 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -1.97126 (min) -1.06825 (max)
57:06 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:06 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.33998 (min) 22.9958 (max)
57:06 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:06 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.694 (min) 15.4087 (max)
57:06 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 27.5314 (min) 31.4408 (max)
57:06 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -9.46177e-05 (min) 1.45964e-05 (max)
57:06 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:06 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:06 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:06 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:06 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:06 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:06 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:06 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:06 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:06 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:06 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:06 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:06 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:06 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 23
57:06 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 2 0]
57:06 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 0 3 3 3 3 3 3 0 3 3 3 3 3 3 3 3 0 3]
57:06 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 148.   0.]
 [  0.   0.   0.   0.   0.]
 [ 11.   0.   0.  39.   0.]
 [  2.   0. 145.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:06 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:06 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:06 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:06 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:06 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.006681202867580992
57:06 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:06 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:06 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:06 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:06 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:06 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:06 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:06 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:06 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:06 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:06 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:06 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:06 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:06 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:06 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:06 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:06 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:06 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:06 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:06 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:06 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:06 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:06 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 28
57:06 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:06 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 28 elements
57:06 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:06 INFO    opendrift.models.chemicaldrift:1861: partitioning: [314, 0, 163, 23, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:06 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:06 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:06 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:06 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:06 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:06 INFO    opendrift.models.basemodel:2042: 2024-06-21 19:56:45.968543 - step 11 of 96 - 500 active elements (0 deactivated)
57:06 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:06 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:06 DEBUG   opendrift.models.basemodel:2061:               57.55687017680575 <- latitude  -> 57.68204102060273
57:06 DEBUG   opendrift.models.basemodel:2066:               10.511952204543425 <- longitude -> 10.712831572615967
57:06 DEBUG   opendrift.models.basemodel:2071:               -22.8642635345459   <- z ->   -0.22876224181974691
57:06 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:06 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:06 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:06 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:06 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:06 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:06 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:06 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:06 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-21 19:00:00 (before)
                2024-06-21 20:00:00 (after)
57:06 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-21 19:00:00) in space  (linearNDFast)
57:06 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:06 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-21 20:00:00) in space  (linearNDFast)
57:06 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:06 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-21 19:00:00, weight 0.05) and
                      after (2024-06-21 20:00:00, weight 0.95) in time
57:06 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:06 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48805888147622 and -59.287179489217166 degrees.
57:06 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48805888147622 and -59.287179489217166 degrees.
57:06 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:06 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:06 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:06 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:06 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:06 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:06 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:06 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:06 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:06 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:06 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:06 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:06 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:06 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:06 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:06 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:06 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:06 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:06 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:06 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:06 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:06 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:06 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:06 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:06 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:06 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:06 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:06 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:06 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:06 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.111026 (min) 0.166345 (max)
57:06 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: 0.0782823 (min) 0.296092 (max)
57:06 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:06 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -2.11692 (min) -1.99832 (max)
57:06 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -2.31125 (min) -1.44597 (max)
57:06 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:06 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.23482 (min) 22.8643 (max)
57:06 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:06 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.6784 (min) 15.3919 (max)
57:06 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 27.4988 (min) 31.4494 (max)
57:06 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000107007 (min) 3.01161e-06 (max)
57:06 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:06 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:06 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:06 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:06 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:06 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:06 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:06 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:06 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:06 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:06 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:06 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:06 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:06 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 13
57:06 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0 0 0 0 2 0 0]
57:06 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3 3 3 3 0 3 3]
57:06 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 160.   0.]
 [  0.   0.   0.   0.   0.]
 [ 12.   0.   0.  50.   0.]
 [  2.   0. 173.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:06 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:06 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:06 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:06 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:06 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.00686032813961287
57:06 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:06 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:06 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:06 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:06 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:06 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:06 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:06 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:06 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:06 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:06 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:06 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:06 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:06 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:06 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:06 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:06 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:06 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:06 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:06 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:06 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:06 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:06 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:06 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:06 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 19
57:06 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:06 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 19 elements
57:06 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:06 INFO    opendrift.models.chemicaldrift:1861: partitioning: [303, 0, 169, 28, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:06 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:06 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:06 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:06 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:06 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:06 INFO    opendrift.models.basemodel:2042: 2024-06-21 20:26:45.968543 - step 12 of 96 - 500 active elements (0 deactivated)
57:06 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:06 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:06 DEBUG   opendrift.models.basemodel:2061:               57.55687017680575 <- latitude  -> 57.686736999077624
57:06 DEBUG   opendrift.models.basemodel:2066:               10.512882817231738 <- longitude -> 10.713154096169808
57:06 DEBUG   opendrift.models.basemodel:2071:               -22.8642635345459   <- z ->   -0.14781697706118974
57:06 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:06 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:06 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:06 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:06 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:06 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:06 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:06 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:06 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-21 20:00:00 (before)
                2024-06-21 21:00:00 (after)
57:07 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
57:07 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
57:07 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
57:07 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
57:07 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
57:07 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_salinity']
57:07 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 42x34x7) for time after (2024-06-21 21:00:00)
57:07 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-21 20:00:00) in space  (linearNDFast)
57:07 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:07 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-21 21:00:00) in space  (linearNDFast)
57:07 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:07 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-21 20:00:00, weight 0.55) and
                      after (2024-06-21 21:00:00, weight 0.45) in time
57:07 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:07 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48712825570738 and -59.286856952538926 degrees.
57:07 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48712825570738 and -59.286856952538926 degrees.
57:07 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:07 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:07 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:07 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:07 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:07 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:07 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:07 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:07 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:07 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:07 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:07 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:07 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:07 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:07 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:07 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:07 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:07 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:07 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:07 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:07 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:07 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:07 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:07 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:07 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:07 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:07 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:07 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:07 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:07 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.0956571 (min) 0.171338 (max)
57:07 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: 0.0755054 (min) 0.314046 (max)
57:07 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:07 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -1.81002 (min) -1.66167 (max)
57:07 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -2.77291 (min) -2.16716 (max)
57:07 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:07 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.16776 (min) 22.8643 (max)
57:07 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:07 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.6807 (min) 15.3903 (max)
57:07 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 27.5112 (min) 31.4356 (max)
57:07 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000109182 (min) 8.66126e-06 (max)
57:07 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:07 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:07 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:07 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:07 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:07 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:07 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:07 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:07 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:07 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:07 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:07 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:07 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:07 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 12
57:07 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 2 0 0 0 0 0 0 2]
57:07 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 0 3 3 3 3 3 3 0]
57:07 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 170.   0.]
 [  0.   0.   0.   0.   0.]
 [ 14.   0.   0.  62.   0.]
 [  2.   0. 192.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:07 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:07 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:07 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:07 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:07 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.00792756386873519
57:07 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:07 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:07 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:07 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:07 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:07 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:07 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:07 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:07 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:07 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:07 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:07 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:07 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:07 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:07 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:07 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:07 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:07 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:07 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:07 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:07 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:07 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:07 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:07 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:07 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:07 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:07 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:07 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:07 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:07 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:07 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 21
57:07 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:07 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 21 elements
57:07 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:07 INFO    opendrift.models.chemicaldrift:1861: partitioning: [295, 0, 173, 32, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:07 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:07 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:07 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:07 DEBUG   opendrift.models.basemodel:759: Lifting 5 elements to seafloor.
57:07 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:07 INFO    opendrift.models.basemodel:2042: 2024-06-21 20:56:45.968543 - step 13 of 96 - 500 active elements (0 deactivated)
57:07 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:07 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:07 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.69181252158187
57:07 DEBUG   opendrift.models.basemodel:2066:               10.51404767935278 <- longitude -> 10.713541979626578
57:07 DEBUG   opendrift.models.basemodel:2071:               -22.8642635345459   <- z ->   -0.060260504945708615
57:07 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:07 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:07 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:07 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:07 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:07 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:07 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:07 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:07 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-21 20:00:00 (before)
                2024-06-21 21:00:00 (after)
57:07 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-21 20:00:00) in space  (linearNDFast)
57:07 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:07 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-21 21:00:00) in space  (linearNDFast)
57:07 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:07 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-21 20:00:00, weight 0.05) and
                      after (2024-06-21 21:00:00, weight 0.95) in time
57:07 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:07 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.485963398442074 and -59.28646907150062 degrees.
57:07 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.485963398442074 and -59.28646907150062 degrees.
57:07 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:07 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:07 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:07 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:07 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:07 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:07 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:07 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:07 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:07 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:07 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:07 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:07 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:07 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:07 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:07 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:07 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:07 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:07 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:07 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:07 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:07 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:07 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:07 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:07 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:07 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:07 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:07 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:07 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:07 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.0815701 (min) 0.179201 (max)
57:07 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: 0.07261 (min) 0.31579 (max)
57:07 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:07 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -1.55044 (min) -1.35415 (max)
57:07 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -3.2954 (min) -2.80192 (max)
57:07 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:07 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.1144 (min) 22.8643 (max)
57:07 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:07 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.6832 (min) 15.4137 (max)
57:07 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 27.521 (min) 31.4217 (max)
57:07 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000119239 (min) 3.63687e-05 (max)
57:07 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:07 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:07 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:07 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:07 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:07 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:07 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:07 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:07 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:07 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:07 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:07 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:07 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:07 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 12
57:07 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 0 0 0 0 0 0 0 0 0 0]
57:07 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 3 3 3 3 3 3 3 3 3 3]
57:07 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 181.   0.]
 [  0.   0.   0.   0.   0.]
 [ 15.   0.   0.  77.   0.]
 [  2.   0. 213.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:07 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:07 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:07 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:07 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:07 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.009476996125823945
57:07 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:07 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:07 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:07 DEBUG   opendrift.models.oceandrift:618: 20 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:07 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:07 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:07 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:07 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:07 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:07 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:07 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:07 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:07 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:07 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:07 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:07 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:07 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:07 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:07 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:07 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 15
57:07 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:07 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 15 elements
57:07 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:07 INFO    opendrift.models.chemicaldrift:1861: partitioning: [285, 0, 180, 35, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:07 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:07 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:07 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:07 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:07 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:07 INFO    opendrift.models.basemodel:2042: 2024-06-21 21:26:45.968543 - step 14 of 96 - 500 active elements (0 deactivated)
57:07 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:07 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:07 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.69686868925591
57:07 DEBUG   opendrift.models.basemodel:2066:               10.514551856258208 <- longitude -> 10.713895917239043
57:07 DEBUG   opendrift.models.basemodel:2071:               -22.8642635345459   <- z ->   -0.24602694804554598
57:07 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:07 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:07 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:07 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:07 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:07 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:07 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:07 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:07 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-21 21:00:00 (before)
                2024-06-21 22:00:00 (after)
57:09 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
57:09 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
57:09 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
57:09 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
57:09 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
57:09 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_salinity']
57:09 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 44x34x7) for time after (2024-06-21 22:00:00)
57:09 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-21 21:00:00) in space  (linearNDFast)
57:09 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:09 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-21 22:00:00) in space  (linearNDFast)
57:09 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:09 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-21 21:00:00, weight 0.55) and
                      after (2024-06-21 22:00:00, weight 0.45) in time
57:09 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:09 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.28611513772421 degrees.
57:09 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.28611513772421 degrees.
57:09 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:09 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:09 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:09 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:09 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:09 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:09 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:09 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:09 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:09 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:09 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:09 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:09 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:09 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:09 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:09 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:09 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:09 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:09 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:09 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:09 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:09 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:09 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:09 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:09 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:09 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:09 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:09 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:09 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:09 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.0665698 (min) 0.189108 (max)
57:09 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: 0.0658002 (min) 0.325769 (max)
57:09 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:09 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -1.77237 (min) -1.3456 (max)
57:09 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -3.64296 (min) -2.95753 (max)
57:09 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:09 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.06598 (min) 22.8643 (max)
57:09 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:09 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.6844 (min) 15.3974 (max)
57:09 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 27.5308 (min) 31.4106 (max)
57:09 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000140075 (min) 4.16793e-05 (max)
57:09 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:09 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:09 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:09 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:09 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:09 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:09 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:09 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:09 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:09 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:09 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:09 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:09 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:09 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 14
57:09 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 2 0 0 0 0 0 0 0 0 0]
57:09 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 0 3 3 3 3 3 3 3 3 3]
57:09 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 194.   0.]
 [  0.   0.   0.   0.   0.]
 [ 16.   0.   0.  84.   0.]
 [  2.   0. 228.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:09 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:09 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:09 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:09 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:09 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.011863879420303989
57:09 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:09 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:09 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:09 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:09 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:09 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:09 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:09 DEBUG   opendrift.models.oceandrift:618: 22 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:09 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:09 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:09 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:09 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:09 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:09 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:09 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:09 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:09 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:09 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:618: 18 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:09 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:09 DEBUG   opendrift.models.oceandrift:618: 22 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:618: 19 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:09 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 15
57:09 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:09 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 15 elements
57:09 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:09 INFO    opendrift.models.chemicaldrift:1861: partitioning: [273, 0, 186, 41, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:09 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:09 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:09 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:09 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:09 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:09 INFO    opendrift.models.basemodel:2042: 2024-06-21 21:56:45.968543 - step 15 of 96 - 500 active elements (0 deactivated)
57:09 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:09 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:09 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.70180770455421
57:09 DEBUG   opendrift.models.basemodel:2066:               10.514551856258208 <- longitude -> 10.714567431839948
57:09 DEBUG   opendrift.models.basemodel:2071:               -22.8642635345459   <- z ->   -0.18162935169382513
57:09 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:09 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:09 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:09 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:09 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:09 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:09 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:09 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:09 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-21 21:00:00 (before)
                2024-06-21 22:00:00 (after)
57:09 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-21 21:00:00) in space  (linearNDFast)
57:09 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:09 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-21 22:00:00) in space  (linearNDFast)
57:09 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:09 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-21 21:00:00, weight 0.05) and
                      after (2024-06-21 22:00:00, weight 0.95) in time
57:09 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:09 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.285443614544484 degrees.
57:09 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.285443614544484 degrees.
57:09 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:09 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:09 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:09 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:09 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:09 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:09 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:09 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:09 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:09 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:09 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:09 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:09 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:09 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:09 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:09 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:09 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:09 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:09 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:09 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:09 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:09 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:09 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:09 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:09 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:09 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:09 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:09 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:09 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:09 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.0550977 (min) 0.198815 (max)
57:09 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: 0.0594058 (min) 0.319459 (max)
57:09 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:09 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -2.16994 (min) -1.21745 (max)
57:09 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -4.00044 (min) -3.08389 (max)
57:09 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:09 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.03461 (min) 22.8643 (max)
57:09 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:09 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.6855 (min) 15.3384 (max)
57:09 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 27.4894 (min) 31.3998 (max)
57:09 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000159006 (min) 4.66063e-05 (max)
57:09 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:09 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:09 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:09 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:09 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:09 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:09 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:09 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:09 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:09 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:09 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:09 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:09 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:09 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 19
57:09 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0]
57:09 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 0 3 3 3 3 0 3 3 3 3 3 3 3 3 3]
57:09 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 211.   0.]
 [  0.   0.   0.   0.   0.]
 [ 18.   0.   0.  92.   0.]
 [  2.   0. 243.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:09 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:09 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:09 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:09 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:09 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.01491473500587694
57:09 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:09 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:09 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:09 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:09 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:09 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:618: 18 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:09 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:09 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:09 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:09 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:09 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:09 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:09 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:09 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:618: 22 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:09 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:09 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:09 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:09 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:09 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 18
57:09 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:09 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 18 elements
57:09 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:09 INFO    opendrift.models.chemicaldrift:1861: partitioning: [258, 0, 194, 48, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:09 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:09 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:09 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:09 DEBUG   opendrift.models.basemodel:759: Lifting 8 elements to seafloor.
57:09 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:09 INFO    opendrift.models.basemodel:2042: 2024-06-21 22:26:45.968543 - step 16 of 96 - 500 active elements (0 deactivated)
57:09 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:09 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:09 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.7066415872702
57:09 DEBUG   opendrift.models.basemodel:2066:               10.514551856258208 <- longitude -> 10.716136802146867
57:09 DEBUG   opendrift.models.basemodel:2071:               -22.8642635345459   <- z ->   -0.23968849040301535
57:09 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:09 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:09 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:09 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:09 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:09 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:09 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:09 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:09 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-21 22:00:00 (before)
                2024-06-21 23:00:00 (after)
57:10 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
57:10 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
57:10 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
57:10 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
57:10 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
57:10 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_salinity']
57:10 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 45x34x7) for time after (2024-06-21 23:00:00)
57:10 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-21 22:00:00) in space  (linearNDFast)
57:10 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:10 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-21 23:00:00) in space  (linearNDFast)
57:10 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:10 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-21 22:00:00, weight 0.55) and
                      after (2024-06-21 23:00:00, weight 0.45) in time
57:10 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:10 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.28387424727016 degrees.
57:10 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.28387424727016 degrees.
57:10 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:10 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:10 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:10 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:10 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:10 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:10 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:10 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:10 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:10 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:10 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:10 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:10 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:10 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:10 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:10 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:10 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:10 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:10 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:10 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:10 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:10 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:10 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:10 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:10 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:10 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:10 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:10 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:10 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:10 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.0484105 (min) 0.20325 (max)
57:10 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: 0.0515178 (min) 0.316557 (max)
57:10 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:10 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -2.0419 (min) -0.245296 (max)
57:10 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -3.99439 (min) -2.17504 (max)
57:10 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:10 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.01466 (min) 22.8643 (max)
57:10 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:10 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.6891 (min) 15.3215 (max)
57:10 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 27.4481 (min) 31.3927 (max)
57:10 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000161769 (min) 5.25747e-05 (max)
57:10 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:10 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:10 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:10 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:10 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:10 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:10 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:10 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:10 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:10 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:10 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:10 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:10 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:10 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 15
57:10 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 2 2 0 0 0 0 0 0 0 0 2]
57:10 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 0 0 3 3 3 3 3 3 3 3 0]
57:10 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 223.   0.]
 [  0.   0.   0.   0.   0.]
 [ 21.   0.   0. 100.   0.]
 [  2.   0. 261.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:10 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:10 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:10 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:10 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:10 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.014546314095884768
57:10 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:10 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:10 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:10 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:10 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:10 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:618: 21 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:10 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:10 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:10 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:10 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:10 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:10 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:10 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:10 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:10 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:10 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:10 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 13
57:10 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:10 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 13 elements
57:10 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:10 INFO    opendrift.models.chemicaldrift:1861: partitioning: [249, 0, 197, 54, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:10 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:10 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:10 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:10 DEBUG   opendrift.models.basemodel:759: Lifting 7 elements to seafloor.
57:10 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:10 INFO    opendrift.models.basemodel:2042: 2024-06-21 22:56:45.968543 - step 17 of 96 - 500 active elements (0 deactivated)
57:10 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:10 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:10 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.71107616059746
57:10 DEBUG   opendrift.models.basemodel:2066:               10.514551856258208 <- longitude -> 10.717874816470674
57:10 DEBUG   opendrift.models.basemodel:2071:               -22.8642635345459   <- z ->   -0.2936027992922212
57:10 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:10 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:10 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:10 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:10 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:10 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:10 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:10 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:10 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-21 22:00:00 (before)
                2024-06-21 23:00:00 (after)
57:10 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-21 22:00:00) in space  (linearNDFast)
57:10 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:10 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-21 23:00:00) in space  (linearNDFast)
57:10 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:10 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-21 22:00:00, weight 0.05) and
                      after (2024-06-21 23:00:00, weight 0.95) in time
57:10 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:10 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.282136221650084 degrees.
57:10 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.282136221650084 degrees.
57:10 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:10 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:10 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:10 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:10 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:10 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:10 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:10 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:10 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:10 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:10 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:10 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:10 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:10 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:10 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:10 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:10 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:10 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:10 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:10 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:10 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:10 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:10 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:10 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:10 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:10 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:10 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:10 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:10 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:10 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.0601483 (min) 0.202015 (max)
57:10 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: 0.0434493 (min) 0.322226 (max)
57:10 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:10 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -1.88696 (min) 0.828825 (max)
57:10 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -3.95636 (min) -1.13946 (max)
57:10 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:10 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.01285 (min) 22.8643 (max)
57:10 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:10 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.693 (min) 15.3608 (max)
57:10 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 27.5482 (min) 31.3861 (max)
57:10 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000168093 (min) 6.37259e-05 (max)
57:10 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:10 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:10 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:10 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:10 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:10 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:10 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:10 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:10 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:10 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:10 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:10 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:10 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:10 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 20
57:10 DEBUG   opendrift.models.chemicaldrift:1452: old species: [3 0 0 0 0 0 0 0 0 2 0 0 0 2 2 0 0 2 0 0]
57:10 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 3 3 3 3 3 3 3 0 3 3 3 0 0 3 3 0 3 3]
57:10 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 238.   0.]
 [  0.   0.   0.   0.   0.]
 [ 25.   0.   0. 107.   0.]
 [  3.   0. 274.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:10 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:10 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:10 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:10 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:10 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.013887872266729504
57:10 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:10 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:10 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:10 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:10 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:10 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:10 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:10 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:10 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:10 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:10 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:10 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 12
57:10 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:10 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 12 elements
57:10 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:10 INFO    opendrift.models.chemicaldrift:1861: partitioning: [239, 0, 199, 62, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:10 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:10 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:10 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:10 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:10 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:10 INFO    opendrift.models.basemodel:2042: 2024-06-21 23:26:45.968543 - step 18 of 96 - 500 active elements (0 deactivated)
57:10 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:10 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:10 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.71492661430417
57:10 DEBUG   opendrift.models.basemodel:2066:               10.514551856258212 <- longitude -> 10.72048805473201
57:10 DEBUG   opendrift.models.basemodel:2071:               -22.8642635345459   <- z ->   -0.36404370826236077
57:10 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:10 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:10 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:10 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:10 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:10 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:10 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:10 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:10 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-21 23:00:00 (before)
                2024-06-22 00:00:00 (after)
57:12 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
57:12 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
57:12 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
57:12 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
57:12 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
57:12 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_salinity']
57:12 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 47x34x7) for time after (2024-06-22 00:00:00)
57:12 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-21 23:00:00) in space  (linearNDFast)
57:12 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:12 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-22 00:00:00) in space  (linearNDFast)
57:12 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:12 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-21 23:00:00, weight 0.55) and
                      after (2024-06-22 00:00:00, weight 0.45) in time
57:12 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:12 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.27952297639741 degrees.
57:12 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.27952297639741 degrees.
57:12 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:12 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:12 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:12 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:12 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:12 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:12 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:12 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:12 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:12 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:12 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:12 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:12 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:12 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:12 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:12 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:12 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:12 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:12 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:12 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:12 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:12 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:12 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:12 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:12 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:12 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:12 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:12 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:12 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:12 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.0677233 (min) 0.204156 (max)
57:12 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: 0.0288767 (min) 0.296641 (max)
57:12 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:12 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -2.84289 (min) -0.790308 (max)
57:12 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -3.64531 (min) -1.4239 (max)
57:12 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:12 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.0307 (min) 22.8643 (max)
57:12 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:12 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.6935 (min) 15.2983 (max)
57:12 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 27.4705 (min) 31.3821 (max)
57:12 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000168621 (min) 7.46999e-05 (max)
57:12 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:12 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:12 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:12 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:12 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:12 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:12 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:12 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:12 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:12 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:12 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:12 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:12 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:12 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 14
57:12 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 2 2 0 2 0 0 0 0]
57:12 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 0 0 3 0 3 3 3 3]
57:12 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 249.   0.]
 [  0.   0.   0.   0.   0.]
 [ 28.   0.   0. 113.   0.]
 [  3.   0. 286.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:12 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:12 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:12 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:12 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:12 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.015446522548790607
57:12 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:12 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:12 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:12 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:12 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:12 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:12 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:12 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:12 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:12 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:12 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:12 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:618: 18 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:12 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:12 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:12 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:12 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:12 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:12 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:12 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:12 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:12 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:12 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:12 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:12 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:12 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:12 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:12 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:12 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:12 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:12 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:12 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:12 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 2
57:12 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:12 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 2 elements
57:12 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:12 INFO    opendrift.models.chemicaldrift:1861: partitioning: [231, 0, 182, 87, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:12 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:12 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:12 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:12 DEBUG   opendrift.models.basemodel:759: Lifting 3 elements to seafloor.
57:12 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:12 INFO    opendrift.models.basemodel:2042: 2024-06-21 23:56:45.968543 - step 19 of 96 - 500 active elements (0 deactivated)
57:12 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:12 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:12 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.71747600843558
57:12 DEBUG   opendrift.models.basemodel:2066:               10.514551856258212 <- longitude -> 10.725433375453632
57:12 DEBUG   opendrift.models.basemodel:2071:               -22.8642635345459   <- z ->   -0.09843705313641538
57:12 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:12 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:12 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:12 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:12 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:12 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:12 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:12 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:12 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-21 23:00:00 (before)
                2024-06-22 00:00:00 (after)
57:12 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-21 23:00:00) in space  (linearNDFast)
57:12 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:12 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-22 00:00:00) in space  (linearNDFast)
57:12 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:12 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-21 23:00:00, weight 0.05) and
                      after (2024-06-22 00:00:00, weight 0.95) in time
57:12 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:12 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.274577652288585 degrees.
57:12 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.274577652288585 degrees.
57:12 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:12 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:12 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:12 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:12 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:12 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:12 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:12 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:12 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:12 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:12 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:12 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:12 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:12 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:12 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:12 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:12 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:12 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:12 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:12 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:12 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:12 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:12 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:12 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:12 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:12 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:12 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:12 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:12 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:12 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.0747954 (min) 0.168436 (max)
57:12 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: 0.00697454 (min) 0.270402 (max)
57:12 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:12 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -3.92842 (min) -2.73484 (max)
57:12 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -3.27906 (min) -1.86783 (max)
57:12 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:12 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.05107 (min) 23.0864 (max)
57:12 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:12 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.6935 (min) 15.2939 (max)
57:12 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 27.4454 (min) 31.3785 (max)
57:12 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000177183 (min) 8.69976e-05 (max)
57:12 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:12 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:12 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:12 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:12 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:12 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:12 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:12 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:12 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:12 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:12 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:12 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:12 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:12 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 19
57:12 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 2 0 3]
57:12 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 0 3 3 3 3 3 3 3 3 3 3 3 3 0 3 0]
57:12 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 265.   0.]
 [  0.   0.   0.   0.   0.]
 [ 30.   0.   0. 129.   0.]
 [  4.   0. 288.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:12 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:12 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:12 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:12 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:12 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.018549725995442655
57:12 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:12 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:12 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:12 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:618: 18 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:618: 19 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:12 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:12 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:12 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:12 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:618: 21 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:12 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:12 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:12 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:12 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:12 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:12 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:12 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:12 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:12 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:12 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
57:12 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:12 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:12 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:12 INFO    opendrift.models.chemicaldrift:1861: partitioning: [218, 0, 173, 109, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:12 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:12 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:12 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:12 DEBUG   opendrift.models.basemodel:759: Lifting 4 elements to seafloor.
57:12 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:12 INFO    opendrift.models.basemodel:2042: 2024-06-22 00:26:45.968543 - step 20 of 96 - 500 active elements (0 deactivated)
57:12 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:12 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:12 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.72007910003659
57:12 DEBUG   opendrift.models.basemodel:2066:               10.514551856258212 <- longitude -> 10.73009156346699
57:12 DEBUG   opendrift.models.basemodel:2071:               -22.8642635345459   <- z ->   -0.16710023819199307
57:12 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:12 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:12 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:12 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:12 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:12 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:12 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:12 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:12 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-22 00:00:00 (before)
                2024-06-22 01:00:00 (after)
57:14 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
57:14 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
57:14 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
57:14 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
57:14 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
57:14 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_salinity']
57:14 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 48x34x7) for time after (2024-06-22 01:00:00)
57:14 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-22 00:00:00) in space  (linearNDFast)
57:14 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:14 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-22 01:00:00) in space  (linearNDFast)
57:14 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:14 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-22 00:00:00, weight 0.55) and
                      after (2024-06-22 01:00:00, weight 0.45) in time
57:14 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:14 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.269919461840765 degrees.
57:14 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.269919461840765 degrees.
57:14 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:14 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:14 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:14 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:14 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:14 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:14 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:14 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:14 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:14 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:14 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:14 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:14 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:14 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:14 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:14 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:14 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:14 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:14 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:14 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:14 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:14 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:14 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:14 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:14 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:14 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:14 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:14 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:14 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:14 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.067603 (min) 0.137387 (max)
57:14 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.038338 (min) 0.216527 (max)
57:14 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:14 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -3.61335 (min) -3.12053 (max)
57:14 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -3.31052 (min) -2.37381 (max)
57:14 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:14 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.08431 (min) 23.7572 (max)
57:14 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:14 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.6944 (min) 15.2577 (max)
57:14 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 27.5893 (min) 31.3758 (max)
57:14 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000160805 (min) 8.87936e-05 (max)
57:14 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:14 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:14 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:14 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:14 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:14 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:14 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:14 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:14 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:14 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:14 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:14 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:14 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:14 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 11
57:14 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 2 0 0 0 2 2 0]
57:14 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 0 3 3 3 0 0 3]
57:14 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 273.   0.]
 [  0.   0.   0.   0.   0.]
 [ 33.   0.   0. 136.   0.]
 [  4.   0. 288.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:14 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:14 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:14 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:14 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:14 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.01628172821510476
57:14 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:14 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:14 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:14 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:14 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:14 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:618: 19 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:14 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:14 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:14 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:14 DEBUG   opendrift.models.oceandrift:618: 22 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:618: 20 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:14 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:14 DEBUG   opendrift.models.oceandrift:618: 21 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:14 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:14 DEBUG   opendrift.models.oceandrift:618: 19 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:14 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:14 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:618: 18 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:618: 18 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:618: 22 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:618: 22 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:618: 21 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:618: 18 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:14 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:14 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:618: 19 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:14 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:14 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:618: 22 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:14 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:14 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:14 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:14 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:14 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 1
57:14 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:14 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 1 elements
57:14 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:14 INFO    opendrift.models.chemicaldrift:1861: partitioning: [213, 0, 159, 128, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:14 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:14 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:14 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:14 DEBUG   opendrift.models.basemodel:759: Lifting 3 elements to seafloor.
57:14 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:14 INFO    opendrift.models.basemodel:2042: 2024-06-22 00:56:45.968543 - step 21 of 96 - 500 active elements (0 deactivated)
57:14 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:14 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:14 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.72232983327359
57:14 DEBUG   opendrift.models.basemodel:2066:               10.514551856258212 <- longitude -> 10.734161781915667
57:14 DEBUG   opendrift.models.basemodel:2071:               -22.8642635345459   <- z ->   -0.16298397790140615
57:14 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:14 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:14 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:14 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:14 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:14 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:14 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:14 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:14 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-22 00:00:00 (before)
                2024-06-22 01:00:00 (after)
57:14 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-22 00:00:00) in space  (linearNDFast)
57:14 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:14 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-22 01:00:00) in space  (linearNDFast)
57:14 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:14 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-22 00:00:00, weight 0.05) and
                      after (2024-06-22 01:00:00, weight 0.95) in time
57:14 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:14 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.265849249218256 degrees.
57:14 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.265849249218256 degrees.
57:14 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:14 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:14 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:14 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:14 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:14 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:14 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:14 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:14 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:14 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:14 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:14 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:14 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:14 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:14 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:14 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:14 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:14 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:14 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:14 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:14 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:14 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:14 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:14 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:14 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:14 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:14 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:14 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:14 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:14 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.0586872 (min) 0.116986 (max)
57:14 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.0962656 (min) 0.201375 (max)
57:14 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:14 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -3.64925 (min) -2.62786 (max)
57:14 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -3.37641 (min) -2.8961 (max)
57:14 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:14 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.11125 (min) 24.3514 (max)
57:14 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:14 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.6955 (min) 15.2582 (max)
57:14 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 27.3569 (min) 31.3733 (max)
57:14 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000132651 (min) 0.000138653 (max)
57:14 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:14 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:14 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:14 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:14 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:14 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:14 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:14 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:14 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:14 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:14 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:14 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:14 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:14 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 18
57:14 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
57:14 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 0 3 3 3 3 3 3 3 3 3 3 3 3 3 3]
57:14 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 290.   0.]
 [  0.   0.   0.   0.   0.]
 [ 34.   0.   0. 148.   0.]
 [  4.   0. 289.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:14 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:14 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:14 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:14 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:14 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.016268720243825318
57:14 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:14 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:14 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:14 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:14 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:14 DEBUG   opendrift.models.oceandrift:618: 18 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:618: 18 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:14 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:14 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:14 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:14 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:14 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:14 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:14 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:14 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:14 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:14 DEBUG   opendrift.models.oceandrift:618: 22 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:14 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:14 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:14 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:14 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:618: 20 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:14 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:14 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:14 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:14 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
57:14 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:14 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:14 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:14 INFO    opendrift.models.chemicaldrift:1861: partitioning: [197, 0, 148, 155, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:14 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:14 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:14 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:14 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:14 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:14 INFO    opendrift.models.basemodel:2042: 2024-06-22 01:26:45.968543 - step 22 of 96 - 500 active elements (0 deactivated)
57:14 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:14 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:14 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.72352264196382
57:14 DEBUG   opendrift.models.basemodel:2066:               10.514551856258212 <- longitude -> 10.737391289530622
57:14 DEBUG   opendrift.models.basemodel:2071:               -23.087276458740234   <- z ->   -0.12177390616558226
57:14 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:14 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:14 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:14 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:14 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:14 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:14 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:14 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:14 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-22 01:00:00 (before)
                2024-06-22 02:00:00 (after)
57:15 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
57:15 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
57:15 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
57:15 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
57:15 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
57:15 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_salinity']
57:15 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 49x34x7) for time after (2024-06-22 02:00:00)
57:15 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-22 01:00:00) in space  (linearNDFast)
57:15 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:15 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-22 02:00:00) in space  (linearNDFast)
57:15 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:15 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-22 01:00:00, weight 0.55) and
                      after (2024-06-22 02:00:00, weight 0.45) in time
57:15 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:15 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.2626197369125 degrees.
57:15 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.2626197369125 degrees.
57:15 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:15 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:15 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:15 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:15 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:15 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:15 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:15 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:15 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:15 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:15 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:15 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:15 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:15 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:15 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:15 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:15 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:15 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:15 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:15 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:15 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:15 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:15 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:15 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:15 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:15 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:15 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:15 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:15 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:15 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.0841153 (min) 0.0997767 (max)
57:15 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.161798 (min) 0.178127 (max)
57:15 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:15 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -2.86196 (min) -1.73867 (max)
57:15 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -3.78996 (min) -3.26627 (max)
57:15 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:15 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.12406 (min) 24.8443 (max)
57:15 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:15 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.7001 (min) 15.2945 (max)
57:15 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 27.3079 (min) 31.3695 (max)
57:15 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -7.26028e-05 (min) 0.000101689 (max)
57:15 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:15 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:15 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:15 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:15 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:15 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:15 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:15 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:15 DEBUG   opendrift.models.basemodel:759: Lifting 4 elements to seafloor.
57:15 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:15 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:15 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:15 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:15 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 9
57:15 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 3 0 0 0 0]
57:15 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 0 3 3 3 3]
57:15 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 298.   0.]
 [  0.   0.   0.   0.   0.]
 [ 34.   0.   0. 158.   0.]
 [  5.   0. 289.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:15 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:15 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:15 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:15 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:15 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.014154246180429248
57:15 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:15 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:15 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:15 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:15 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:15 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:15 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:15 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:15 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:15 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:15 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:15 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:15 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:15 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:15 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:15 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:15 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
57:15 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:15 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:15 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:15 INFO    opendrift.models.chemicaldrift:1861: partitioning: [190, 0, 142, 168, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:15 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:15 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:15 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:15 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:15 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:15 INFO    opendrift.models.basemodel:2042: 2024-06-22 01:56:45.968543 - step 23 of 96 - 500 active elements (0 deactivated)
57:15 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:15 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:15 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.72572463712388
57:15 DEBUG   opendrift.models.basemodel:2066:               10.514551856258212 <- longitude -> 10.74040272008091
57:15 DEBUG   opendrift.models.basemodel:2071:               -23.087276458740234   <- z ->   0.0
57:15 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:15 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:15 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:15 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:15 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:15 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:15 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:15 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:15 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-22 01:00:00 (before)
                2024-06-22 02:00:00 (after)
57:15 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-22 01:00:00) in space  (linearNDFast)
57:15 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:15 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-22 02:00:00) in space  (linearNDFast)
57:15 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:15 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-22 01:00:00, weight 0.05) and
                      after (2024-06-22 02:00:00, weight 0.95) in time
57:15 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:15 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.25960830837987 degrees.
57:15 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.25960830837987 degrees.
57:15 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:15 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:15 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:15 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:15 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:15 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:15 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:15 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:15 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:15 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:15 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:15 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:15 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:15 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:15 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:15 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:15 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:15 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:15 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:15 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:15 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:15 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:15 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:15 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:15 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:15 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:15 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:15 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:15 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:15 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.119804 (min) 0.0783785 (max)
57:15 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.203911 (min) 0.126524 (max)
57:15 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:15 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -2.11052 (min) -0.297037 (max)
57:15 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -4.25373 (min) -3.55131 (max)
57:15 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:15 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.10008 (min) 25.4317 (max)
57:15 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:15 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.7051 (min) 15.2153 (max)
57:15 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 27.4053 (min) 31.4067 (max)
57:15 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -3.96601e-05 (min) 0.000335549 (max)
57:15 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:15 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:15 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:15 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:15 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:15 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:15 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:15 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:15 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:15 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:15 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:15 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:15 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:15 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 13
57:15 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 2 2 2 0 0 0 0 0 2 0 0]
57:15 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 0 0 0 3 3 3 3 3 0 3 3]
57:15 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 307.   0.]
 [  0.   0.   0.   0.   0.]
 [ 38.   0.   0. 164.   0.]
 [  5.   0. 289.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:15 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:15 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:15 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:15 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:15 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.014154387398735988
57:15 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:15 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:15 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:15 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:15 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:15 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:15 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:15 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:15 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:15 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:15 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:15 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:15 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:15 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:15 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:15 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 1
57:15 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:15 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 1 elements
57:15 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:15 INFO    opendrift.models.chemicaldrift:1861: partitioning: [185, 0, 133, 182, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:15 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:15 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:15 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:15 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:15 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:15 INFO    opendrift.models.basemodel:2042: 2024-06-22 02:26:45.968543 - step 24 of 96 - 500 active elements (0 deactivated)
57:15 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:15 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:15 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.722647663750124
57:15 DEBUG   opendrift.models.basemodel:2066:               10.514551856258212 <- longitude -> 10.742621089127338
57:15 DEBUG   opendrift.models.basemodel:2071:               -23.087276458740234   <- z ->   -0.01552961358234442
57:15 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:15 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:15 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:15 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:15 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:15 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:15 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:15 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:15 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-22 02:00:00 (before)
                2024-06-22 03:00:00 (after)
57:17 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
57:17 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
57:17 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
57:17 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
57:17 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
57:17 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_salinity']
57:17 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 49x35x7) for time after (2024-06-22 03:00:00)
57:17 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-22 02:00:00) in space  (linearNDFast)
57:17 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:17 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-22 03:00:00) in space  (linearNDFast)
57:17 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:17 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-22 02:00:00, weight 0.55) and
                      after (2024-06-22 03:00:00, weight 0.45) in time
57:17 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:17 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.257389938258946 degrees.
57:17 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.257389938258946 degrees.
57:17 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:17 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:17 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:17 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:17 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:17 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:17 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:17 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:17 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:17 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:17 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:17 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:17 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:17 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:17 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:17 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:17 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:17 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:17 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:17 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:17 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:17 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:17 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:17 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:17 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:17 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:17 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:17 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:17 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:17 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.117456 (min) 0.0656853 (max)
57:17 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.204001 (min) 0.114736 (max)
57:17 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:17 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -2.02704 (min) -0.654001 (max)
57:17 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -4.88414 (min) -4.14679 (max)
57:17 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:17 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.08328 (min) 25.3123 (max)
57:17 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:17 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.7101 (min) 15.2669 (max)
57:17 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 27.354 (min) 31.3998 (max)
57:17 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -1.4667e-05 (min) 0.000306589 (max)
57:17 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:17 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:17 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:17 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:17 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:17 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:17 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:17 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:17 DEBUG   opendrift.models.basemodel:759: Lifting 3 elements to seafloor.
57:17 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:17 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:17 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:17 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:17 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 14
57:17 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 2 0 0 0 0 0 0 0 0 2 0 0]
57:17 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 0 3 3 3 3 3 3 3 3 0 3 3]
57:17 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 319.   0.]
 [  0.   0.   0.   0.   0.]
 [ 40.   0.   0. 170.   0.]
 [  5.   0. 290.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:17 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:17 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:17 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:17 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:17 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.018088874173232527
57:17 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:17 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:17 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:17 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:17 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:17 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:17 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:17 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:17 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:17 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:17 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:17 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:17 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:17 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:17 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:17 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:17 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 3
57:17 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:17 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 3 elements
57:17 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:17 INFO    opendrift.models.chemicaldrift:1861: partitioning: [175, 0, 128, 197, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:17 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:17 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:17 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:17 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:17 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:17 INFO    opendrift.models.basemodel:2042: 2024-06-22 02:56:45.968543 - step 25 of 96 - 500 active elements (0 deactivated)
57:17 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:17 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:17 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.71962004715868
57:17 DEBUG   opendrift.models.basemodel:2066:               10.51455185625821 <- longitude -> 10.744306009474862
57:17 DEBUG   opendrift.models.basemodel:2071:               -23.087276458740234   <- z ->   0.0
57:17 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:17 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:17 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:17 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:17 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:17 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:17 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:17 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:17 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-22 02:00:00 (before)
                2024-06-22 03:00:00 (after)
57:17 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-22 02:00:00) in space  (linearNDFast)
57:17 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:17 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-22 03:00:00) in space  (linearNDFast)
57:17 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:17 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-22 02:00:00, weight 0.05) and
                      after (2024-06-22 03:00:00, weight 0.95) in time
57:17 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:17 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.2557050175692 degrees.
57:17 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.2557050175692 degrees.
57:17 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:17 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:17 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:17 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:17 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:17 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:17 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:17 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:17 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:17 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:17 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:17 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:17 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:17 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:17 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:17 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:17 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:17 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:17 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:17 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:17 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:17 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:17 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:17 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:17 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:17 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:17 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:17 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:17 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:17 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.136928 (min) 0.0615249 (max)
57:17 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.192536 (min) 0.131659 (max)
57:17 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:17 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -2.47771 (min) -0.857271 (max)
57:17 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -5.57257 (min) -4.78944 (max)
57:17 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:17 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.06252 (min) 25.1152 (max)
57:17 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:17 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.7151 (min) 15.2353 (max)
57:17 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 27.3278 (min) 31.4429 (max)
57:17 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -5.70817e-06 (min) 0.000308561 (max)
57:17 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:17 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:17 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:17 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:17 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:17 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:17 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:17 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:17 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:17 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:17 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:17 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:17 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:17 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 11
57:17 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 2 0 0 2 0]
57:17 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 0 3 3 0 3]
57:17 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 328.   0.]
 [  0.   0.   0.   0.   0.]
 [ 42.   0.   0. 176.   0.]
 [  5.   0. 293.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:17 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:17 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:17 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:17 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:17 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.025465304746754534
57:17 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:17 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:17 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:17 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:17 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:17 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:17 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:17 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:17 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:17 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:17 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:17 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:17 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:17 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:17 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:17 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:17 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:17 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 4
57:17 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:17 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 4 elements
57:17 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:17 INFO    opendrift.models.chemicaldrift:1861: partitioning: [168, 0, 123, 209, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:17 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:17 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:17 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:17 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:17 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:17 INFO    opendrift.models.basemodel:2042: 2024-06-22 03:26:45.968543 - step 26 of 96 - 500 active elements (0 deactivated)
57:17 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:17 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:17 DEBUG   opendrift.models.basemodel:2061:               57.55687017680575 <- latitude  -> 57.71943624451041
57:17 DEBUG   opendrift.models.basemodel:2066:               10.51455185625821 <- longitude -> 10.746057304160816
57:17 DEBUG   opendrift.models.basemodel:2071:               -22.8642635345459   <- z ->   -0.017851439283811055
57:17 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:17 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:17 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:17 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:17 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:17 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:17 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:17 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:17 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-22 03:00:00 (before)
                2024-06-22 04:00:00 (after)
57:18 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
57:18 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
57:18 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
57:18 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
57:18 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
57:18 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_salinity']
57:18 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 48x35x7) for time after (2024-06-22 04:00:00)
57:18 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-22 03:00:00) in space  (linearNDFast)
57:18 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:18 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-22 04:00:00) in space  (linearNDFast)
57:18 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:18 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-22 03:00:00, weight 0.55) and
                      after (2024-06-22 04:00:00, weight 0.45) in time
57:18 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:18 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.253953714920705 degrees.
57:19 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.253953714920705 degrees.
57:19 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:19 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:19 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:19 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:19 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:19 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:19 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:19 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:19 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:19 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:19 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:19 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:19 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:19 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:19 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:19 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:19 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:19 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:19 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:19 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:19 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:19 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:19 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:19 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:19 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:19 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:19 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:19 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:19 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:19 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.127588 (min) 0.0573871 (max)
57:19 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.163825 (min) 0.159951 (max)
57:19 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:19 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -2.22424 (min) -1.16051 (max)
57:19 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -6.37295 (min) -5.0897 (max)
57:19 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:19 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.03959 (min) 25.0824 (max)
57:19 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:19 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.7201 (min) 15.2439 (max)
57:19 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 27.1498 (min) 31.691 (max)
57:19 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -1.57783e-05 (min) 0.000301975 (max)
57:19 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:19 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:19 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:19 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:19 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:19 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:19 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:19 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:19 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:19 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:19 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:19 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:19 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:19 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 18
57:19 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 3 0 0 0 0 0 0 0 0 0 2 0 0 0 2 0 2]
57:19 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 3 3 3 3 3 3 3 3 3 0 3 3 3 0 3 0]
57:19 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 342.   0.]
 [  0.   0.   0.   0.   0.]
 [ 45.   0.   0. 183.   0.]
 [  6.   0. 297.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:19 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:19 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:19 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:19 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:19 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.03095953889303265
57:19 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:19 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:19 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:19 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:19 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:19 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:19 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:19 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:19 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:19 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:19 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:19 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:19 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
57:19 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:19 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:19 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:19 INFO    opendrift.models.chemicaldrift:1861: partitioning: [158, 0, 116, 226, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:19 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:19 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:19 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:19 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:19 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:19 INFO    opendrift.models.basemodel:2042: 2024-06-22 03:56:45.968543 - step 27 of 96 - 500 active elements (0 deactivated)
57:19 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:19 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:19 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.71707038528088
57:19 DEBUG   opendrift.models.basemodel:2066:               10.51455185625821 <- longitude -> 10.747732207610518
57:19 DEBUG   opendrift.models.basemodel:2071:               -22.8642635345459   <- z ->   0.0
57:19 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:19 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:19 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:19 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:19 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:19 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:19 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:19 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:19 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-22 03:00:00 (before)
                2024-06-22 04:00:00 (after)
57:19 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-22 03:00:00) in space  (linearNDFast)
57:19 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:19 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-22 04:00:00) in space  (linearNDFast)
57:19 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:19 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-22 03:00:00, weight 0.05) and
                      after (2024-06-22 04:00:00, weight 0.95) in time
57:19 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:19 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.25227881452904 degrees.
57:19 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.25227881452904 degrees.
57:19 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:19 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:19 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:19 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:19 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:19 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:19 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:19 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:19 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:19 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:19 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:19 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:19 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:19 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:19 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:19 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:19 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:19 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:19 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:19 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:19 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:19 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:19 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:19 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:19 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:19 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:19 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:19 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:19 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:19 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.120499 (min) 0.0695887 (max)
57:19 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.125607 (min) 0.210645 (max)
57:19 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:19 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -2.33917 (min) -0.979358 (max)
57:19 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -7.157 (min) -5.34428 (max)
57:19 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:19 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.00559 (min) 24.7751 (max)
57:19 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:19 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.7251 (min) 15.2249 (max)
57:19 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 27.3436 (min) 31.4414 (max)
57:19 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -2.55494e-05 (min) 0.000315988 (max)
57:19 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:19 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:19 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:19 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:19 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:19 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:19 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:19 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:19 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:19 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:19 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:19 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:19 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:19 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 10
57:19 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 0 0 2 0 2 0 0 0]
57:19 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 3 3 0 3 0 3 3 3]
57:19 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 349.   0.]
 [  0.   0.   0.   0.   0.]
 [ 48.   0.   0. 187.   0.]
 [  6.   0. 297.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:19 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:19 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:19 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:19 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:19 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.0405368055854366
57:19 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:19 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:19 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:19 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:19 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:19 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:618: 18 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:618: 20 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:19 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:19 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:618: 18 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:618: 19 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:618: 20 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:618: 20 elements penetrated seafloor, lifting up
57:19 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:19 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
57:19 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:19 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:19 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:19 INFO    opendrift.models.chemicaldrift:1861: partitioning: [154, 0, 111, 235, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:19 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:19 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:19 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:19 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:19 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:19 INFO    opendrift.models.basemodel:2042: 2024-06-22 04:26:45.968543 - step 28 of 96 - 500 active elements (0 deactivated)
57:19 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:19 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:19 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.71791009972236
57:19 DEBUG   opendrift.models.basemodel:2066:               10.51455185625821 <- longitude -> 10.749299491348344
57:19 DEBUG   opendrift.models.basemodel:2071:               -22.8642635345459   <- z ->   0.0
57:19 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:19 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:19 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:19 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:19 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:19 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:19 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:19 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:19 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-22 04:00:00 (before)
                2024-06-22 05:00:00 (after)
57:20 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
57:20 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
57:20 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
57:20 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
57:20 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
57:20 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_salinity']
57:20 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 48x35x7) for time after (2024-06-22 05:00:00)
57:20 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-22 04:00:00) in space  (linearNDFast)
57:20 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:20 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-22 05:00:00) in space  (linearNDFast)
57:20 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:20 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-22 04:00:00, weight 0.55) and
                      after (2024-06-22 05:00:00, weight 0.45) in time
57:20 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:20 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.25071154229903 degrees.
57:20 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.25071154229903 degrees.
57:20 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:20 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:20 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:20 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:20 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:20 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:20 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:20 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:20 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:20 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:20 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:20 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:20 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:20 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:20 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:20 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:20 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:20 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:20 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:20 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:20 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:20 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:20 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:20 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:20 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:20 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:20 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:20 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:20 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:20 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.117568 (min) 0.0878862 (max)
57:20 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.0578997 (min) 0.248588 (max)
57:20 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:20 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -3.18346 (min) -2.02696 (max)
57:20 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -6.89977 (min) -5.64849 (max)
57:20 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:20 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.97149 (min) 24.6703 (max)
57:20 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:20 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.7291 (min) 15.2061 (max)
57:20 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 27.2004 (min) 31.5345 (max)
57:20 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -4.04683e-05 (min) 0.000294802 (max)
57:20 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:20 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:20 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:20 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:20 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:20 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:20 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:20 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:20 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:20 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:20 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:20 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:20 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:20 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 12
57:20 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 2 3 0 0 0 0 0]
57:20 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 0 0 3 3 3 3 3]
57:20 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 359.   0.]
 [  0.   0.   0.   0.   0.]
 [ 49.   0.   0. 189.   0.]
 [  7.   0. 297.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:20 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:20 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:20 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:20 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:20 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.041141636532281874
57:20 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:20 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:20 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:20 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:20 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:20 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:618: 20 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:20 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:20 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:20 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:20 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:636: 4 elements reached seafloor, interacting with bottom
57:20 DEBUG   opendrift.models.basemodel:759: Lifting 4 elements to seafloor.
57:20 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:618: 19 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:20 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
57:20 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:20 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:20 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:20 INFO    opendrift.models.chemicaldrift:1861: partitioning: [146, 0, 103, 251, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:20 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:20 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:20 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:20 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:20 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:20 INFO    opendrift.models.basemodel:2042: 2024-06-22 04:56:45.968543 - step 29 of 96 - 500 active elements (0 deactivated)
57:20 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:20 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:20 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.721927758891105
57:20 DEBUG   opendrift.models.basemodel:2066:               10.51455185625821 <- longitude -> 10.746248429660527
57:20 DEBUG   opendrift.models.basemodel:2071:               -22.8642635345459   <- z ->   -0.0335440027801045
57:20 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:20 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:20 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:20 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:20 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:20 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:20 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:20 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:20 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-22 04:00:00 (before)
                2024-06-22 05:00:00 (after)
57:20 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-22 04:00:00) in space  (linearNDFast)
57:20 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:20 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-22 05:00:00) in space  (linearNDFast)
57:20 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:20 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-22 04:00:00, weight 0.05) and
                      after (2024-06-22 05:00:00, weight 0.95) in time
57:20 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:20 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.25376259806303 degrees.
57:20 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.25376259806303 degrees.
57:20 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:20 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:20 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:20 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:20 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:20 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:20 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:20 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:20 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:20 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:20 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:20 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:20 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:20 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:20 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:20 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:20 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:20 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:20 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:20 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:20 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:20 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:20 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:20 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:20 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:20 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:20 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:20 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:20 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:20 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.118864 (min) 0.103038 (max)
57:20 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.0307972 (min) 0.229933 (max)
57:20 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:20 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -4.08226 (min) -3.22027 (max)
57:20 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -6.66248 (min) -5.95419 (max)
57:20 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:20 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.93049 (min) 25.134 (max)
57:20 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:20 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.733 (min) 15.1884 (max)
57:20 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 26.9828 (min) 31.5073 (max)
57:20 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -5.89225e-05 (min) 0.000282943 (max)
57:20 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:20 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:20 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:20 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:20 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:20 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:20 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:20 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:20 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:20 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:20 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:20 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:20 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:20 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 7
57:20 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0 0 0]
57:20 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3 3 3]
57:20 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 366.   0.]
 [  0.   0.   0.   0.   0.]
 [ 49.   0.   0. 196.   0.]
 [  7.   0. 297.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:20 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:20 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:20 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:20 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:20 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.0429850544124954
57:20 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:20 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:20 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:20 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:20 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:20 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:618: 20 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:618: 18 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:618: 19 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:618: 18 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:20 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:20 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
57:20 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:20 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:20 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:20 INFO    opendrift.models.chemicaldrift:1861: partitioning: [139, 0, 102, 259, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:20 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:20 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:20 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:20 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:20 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:20 INFO    opendrift.models.basemodel:2042: 2024-06-22 05:26:45.968543 - step 30 of 96 - 500 active elements (0 deactivated)
57:20 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:20 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:20 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.724444235926775
57:20 DEBUG   opendrift.models.basemodel:2066:               10.514551856258207 <- longitude -> 10.74275776146168
57:20 DEBUG   opendrift.models.basemodel:2071:               -22.8642635345459   <- z ->   0.0
57:20 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:20 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:20 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:20 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:20 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:20 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:20 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:20 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:20 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-22 05:00:00 (before)
                2024-06-22 06:00:00 (after)
57:22 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
57:22 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
57:22 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
57:22 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
57:22 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
57:22 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_salinity']
57:22 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 49x35x7) for time after (2024-06-22 06:00:00)
57:22 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-22 05:00:00) in space  (linearNDFast)
57:22 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:22 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-22 06:00:00) in space  (linearNDFast)
57:22 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:22 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-22 05:00:00, weight 0.55) and
                      after (2024-06-22 06:00:00, weight 0.45) in time
57:22 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:22 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.25725327402146 degrees.
57:22 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.25725327402146 degrees.
57:22 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:22 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:22 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:22 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:22 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:22 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:22 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:22 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:22 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:22 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:22 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:22 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:22 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:22 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:22 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:22 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:22 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:22 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:22 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:22 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:22 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:22 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:22 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:22 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:22 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:22 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:22 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:22 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:22 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:22 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.11969 (min) 0.172478 (max)
57:22 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.00959377 (min) 0.347388 (max)
57:22 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:22 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -4.95917 (min) -4.21069 (max)
57:22 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -5.80567 (min) -4.96725 (max)
57:22 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:22 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.88253 (min) 25.1238 (max)
57:22 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:22 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.7344 (min) 15.1755 (max)
57:22 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 26.8868 (min) 31.5687 (max)
57:22 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -8.81589e-05 (min) 0.000274362 (max)
57:22 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:22 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:22 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:22 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:22 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:22 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:22 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:22 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:22 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:22 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:22 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:22 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:22 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:22 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 12
57:22 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 0 0 0 0 0 0 0 0 0 0]
57:22 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 3 3 3 3 3 3 3 3 3 3]
57:22 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 377.   0.]
 [  0.   0.   0.   0.   0.]
 [ 50.   0.   0. 197.   0.]
 [  7.   0. 297.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:22 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:22 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:22 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:22 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:22 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.040286079542737885
57:22 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:22 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:22 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:22 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:22 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:22 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:22 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:22 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:22 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:22 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:22 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:22 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:22 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:22 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:22 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
57:22 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:22 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:22 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:22 INFO    opendrift.models.chemicaldrift:1861: partitioning: [129, 0, 95, 276, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:22 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:22 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:22 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:22 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:22 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:22 INFO    opendrift.models.basemodel:2042: 2024-06-22 05:56:45.968543 - step 31 of 96 - 500 active elements (0 deactivated)
57:22 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:22 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:22 DEBUG   opendrift.models.basemodel:2061:               57.55687017680575 <- latitude  -> 57.730058634833334
57:22 DEBUG   opendrift.models.basemodel:2066:               10.514551856258207 <- longitude -> 10.743542871473148
57:22 DEBUG   opendrift.models.basemodel:2071:               -22.8642635345459   <- z ->   0.0
57:22 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:22 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:22 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:22 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:22 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:22 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:22 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:22 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:22 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-22 05:00:00 (before)
                2024-06-22 06:00:00 (after)
57:22 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-22 05:00:00) in space  (linearNDFast)
57:22 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:22 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-22 06:00:00) in space  (linearNDFast)
57:22 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:22 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-22 05:00:00, weight 0.05) and
                      after (2024-06-22 06:00:00, weight 0.95) in time
57:22 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:22 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.25646816376946 degrees.
57:22 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.25646816376946 degrees.
57:22 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:22 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:22 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:22 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:22 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:22 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:22 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:22 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:22 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:22 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:22 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:22 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:22 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:22 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:22 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:22 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:22 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:22 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:22 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:22 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:22 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:22 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:22 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:22 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:22 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:22 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:22 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:22 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:22 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:22 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.105774 (min) 0.163694 (max)
57:22 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: 0.0108969 (min) 0.373255 (max)
57:22 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:22 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -5.83697 (min) -5.18941 (max)
57:22 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -5.13969 (min) -3.47927 (max)
57:22 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:22 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.88253 (min) 26.3838 (max)
57:22 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:22 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.7355 (min) 15.1365 (max)
57:22 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 26.9004 (min) 31.6268 (max)
57:22 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000121178 (min) 0.000238761 (max)
57:22 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:22 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:22 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:22 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:22 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:22 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:22 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:22 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:22 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:22 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:22 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:22 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:22 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:22 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 4
57:22 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 0 2]
57:22 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 3 0]
57:22 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 379.   0.]
 [  0.   0.   0.   0.   0.]
 [ 52.   0.   0. 203.   0.]
 [  7.   0. 297.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:22 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:22 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:22 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:22 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:22 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.039581495514470266
57:22 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:22 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:22 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:22 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:22 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:22 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:22 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:22 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:618: 18 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:22 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:22 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:22 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:22 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 3
57:22 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:22 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 3 elements
57:22 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:22 INFO    opendrift.models.chemicaldrift:1861: partitioning: [129, 0, 93, 278, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:22 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:22 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:22 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:22 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:22 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:22 INFO    opendrift.models.basemodel:2042: 2024-06-22 06:26:45.968543 - step 32 of 96 - 500 active elements (0 deactivated)
57:22 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:22 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:22 DEBUG   opendrift.models.basemodel:2061:               57.55687017680575 <- latitude  -> 57.736091084644706
57:22 DEBUG   opendrift.models.basemodel:2066:               10.514551856258201 <- longitude -> 10.746457731525608
57:22 DEBUG   opendrift.models.basemodel:2071:               -22.8642635345459   <- z ->   -0.22673218531527933
57:22 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:22 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:22 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:22 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:22 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:22 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:22 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:22 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:22 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-22 06:00:00 (before)
                2024-06-22 07:00:00 (after)
57:23 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
57:23 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
57:23 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
57:23 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
57:23 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
57:23 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_salinity']
57:23 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 50x35x7) for time after (2024-06-22 07:00:00)
57:23 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-22 06:00:00) in space  (linearNDFast)
57:23 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:23 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-22 07:00:00) in space  (linearNDFast)
57:23 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:23 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-22 06:00:00, weight 0.55) and
                      after (2024-06-22 07:00:00, weight 0.45) in time
57:23 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:23 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.253553287836226 degrees.
57:23 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.253553287836226 degrees.
57:23 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:23 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:23 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:23 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:23 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:23 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:23 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:23 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:23 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:23 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:23 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:23 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:23 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:23 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:23 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:23 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:23 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:23 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:23 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:23 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:23 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:23 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:23 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:23 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:23 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:23 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:23 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:23 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:23 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:23 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.136291 (min) 0.165473 (max)
57:23 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: 0.0170117 (min) 0.329721 (max)
57:23 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:23 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -6.19217 (min) -5.24892 (max)
57:23 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -4.03125 (min) -2.77297 (max)
57:23 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:23 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.88253 (min) 28.233 (max)
57:23 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:23 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.7391 (min) 15.1192 (max)
57:23 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 27.4473 (min) 32.0254 (max)
57:23 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000146522 (min) 0.000214606 (max)
57:23 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:23 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:23 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:23 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:23 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:23 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:23 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:23 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:23 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:23 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:23 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:23 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:23 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:23 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 12
57:23 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 2 0 0 0 2 2 0 0]
57:23 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 0 3 3 3 0 0 3 3]
57:23 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 388.   0.]
 [  0.   0.   0.   0.   0.]
 [ 55.   0.   0. 206.   0.]
 [  7.   0. 300.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:23 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:23 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:23 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:23 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:23 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.03495394812553596
57:23 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:23 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:23 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:23 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:618: 18 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:23 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:23 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:23 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:23 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:23 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 13
57:23 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:23 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 13 elements
57:23 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:23 INFO    opendrift.models.chemicaldrift:1861: partitioning: [123, 0, 101, 276, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:23 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:23 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:23 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:23 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:23 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:23 INFO    opendrift.models.basemodel:2042: 2024-06-22 06:56:45.968543 - step 33 of 96 - 500 active elements (0 deactivated)
57:23 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:23 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:23 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.73914349488892
57:23 DEBUG   opendrift.models.basemodel:2066:               10.514551856258201 <- longitude -> 10.746123405940907
57:23 DEBUG   opendrift.models.basemodel:2071:               -24.83750194855389   <- z ->   -0.16039262492325745
57:23 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:23 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:23 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:23 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:23 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:23 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:23 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:23 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:23 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-22 06:00:00 (before)
                2024-06-22 07:00:00 (after)
57:23 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-22 06:00:00) in space  (linearNDFast)
57:23 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:23 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-22 07:00:00) in space  (linearNDFast)
57:23 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:23 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-22 06:00:00, weight 0.05) and
                      after (2024-06-22 07:00:00, weight 0.95) in time
57:23 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:23 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.25388762673378 degrees.
57:23 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.25388762673378 degrees.
57:23 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:23 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:23 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:23 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:23 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:23 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:23 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:23 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:23 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:23 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:23 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:23 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:23 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:23 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:23 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:23 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:23 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:23 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:23 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:23 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:23 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:23 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:23 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:23 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:23 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:23 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:23 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:23 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:23 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:23 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.133882 (min) 0.167562 (max)
57:23 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: 0.0213896 (min) 0.367069 (max)
57:23 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:23 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -6.52664 (min) -4.89583 (max)
57:23 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -3.04143 (min) -1.8579 (max)
57:23 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:23 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.88253 (min) 28.5506 (max)
57:23 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:23 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.743 (min) 15.1601 (max)
57:23 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 27.0013 (min) 32.9186 (max)
57:23 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000170938 (min) 0.000160372 (max)
57:23 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:23 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:23 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:23 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:23 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:23 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:23 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:23 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:23 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:23 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:23 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:23 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:23 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:23 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 10
57:23 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 2 0 0 0 0 2 0 0]
57:23 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 0 3 3 3 3 0 3 3]
57:23 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 395.   0.]
 [  0.   0.   0.   0.   0.]
 [ 58.   0.   0. 208.   0.]
 [  7.   0. 313.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:23 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:23 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:23 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:23 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:23 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.03401539007620647
57:23 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:23 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:23 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:23 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:23 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:23 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:23 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:23 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:23 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:23 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:23 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:23 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 49
57:23 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:23 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 49 elements
57:23 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:23 INFO    opendrift.models.chemicaldrift:1861: partitioning: [119, 0, 144, 237, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:23 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:23 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:23 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:23 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:23 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:23 INFO    opendrift.models.basemodel:2042: 2024-06-22 07:26:45.968543 - step 34 of 96 - 500 active elements (0 deactivated)
57:23 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:23 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:23 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.74095904239052
57:23 DEBUG   opendrift.models.basemodel:2066:               10.514551856258201 <- longitude -> 10.745091532229237
57:23 DEBUG   opendrift.models.basemodel:2071:               -22.8642635345459   <- z ->   -0.21345230180495345
57:23 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:23 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:23 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:23 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:23 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:23 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:23 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:23 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:23 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-22 07:00:00 (before)
                2024-06-22 08:00:00 (after)
57:25 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
57:25 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
57:25 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
57:25 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
57:25 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
57:25 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_salinity']
57:25 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 51x35x7) for time after (2024-06-22 08:00:00)
57:25 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-22 07:00:00) in space  (linearNDFast)
57:25 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:25 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-22 08:00:00) in space  (linearNDFast)
57:25 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:25 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-22 07:00:00, weight 0.55) and
                      after (2024-06-22 08:00:00, weight 0.45) in time
57:25 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:25 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.25491948688341 degrees.
57:25 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.25491948688341 degrees.
57:25 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:25 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:25 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:25 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:25 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:25 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:25 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:25 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:25 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:25 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:25 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:25 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:25 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:25 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:25 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:25 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:25 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:25 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:25 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:25 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:25 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:25 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:25 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:25 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:25 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:25 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:25 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:25 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:25 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:25 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.133499 (min) 0.178809 (max)
57:25 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: 0.00981208 (min) 0.364698 (max)
57:25 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:25 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -7.11563 (min) -5.84821 (max)
57:25 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -2.64446 (min) -2.06057 (max)
57:25 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:25 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.88253 (min) 28.5596 (max)
57:25 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:25 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.7492 (min) 15.1546 (max)
57:25 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 26.7089 (min) 32.0838 (max)
57:25 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000181409 (min) 0.000120565 (max)
57:25 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:25 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:25 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:25 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:25 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:25 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:25 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:25 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:25 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:25 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:25 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:25 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:25 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:25 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 6
57:25 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 2 2 0 3]
57:25 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 0 0 3 0]
57:25 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 398.   0.]
 [  0.   0.   0.   0.   0.]
 [ 60.   0.   0. 211.   0.]
 [  8.   0. 362.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:25 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:25 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:25 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:25 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:25 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.04032794724022816
57:25 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:25 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:25 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:25 DEBUG   opendrift.models.oceandrift:618: 27 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:25 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:25 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:618: 18 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:618: 18 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:25 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:25 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:25 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:25 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:25 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:25 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:618: 21 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:25 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:25 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 15
57:25 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:25 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 15 elements
57:25 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:25 INFO    opendrift.models.chemicaldrift:1861: partitioning: [119, 0, 151, 230, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:25 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:25 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:25 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:25 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:25 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:25 INFO    opendrift.models.basemodel:2042: 2024-06-22 07:56:45.968543 - step 35 of 96 - 500 active elements (0 deactivated)
57:25 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:25 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:25 DEBUG   opendrift.models.basemodel:2061:               57.55687017680575 <- latitude  -> 57.746853252173864
57:25 DEBUG   opendrift.models.basemodel:2066:               10.514551856258201 <- longitude -> 10.746147873397906
57:25 DEBUG   opendrift.models.basemodel:2071:               -22.8642635345459   <- z ->   -0.1176295177372303
57:25 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:25 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:25 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:25 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:25 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:25 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:25 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:25 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:25 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-22 07:00:00 (before)
                2024-06-22 08:00:00 (after)
57:25 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-22 07:00:00) in space  (linearNDFast)
57:25 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:25 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-22 08:00:00) in space  (linearNDFast)
57:25 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:25 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-22 07:00:00, weight 0.05) and
                      after (2024-06-22 08:00:00, weight 0.95) in time
57:25 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:25 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.253863144645344 degrees.
57:25 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.253863144645344 degrees.
57:25 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:25 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:25 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:25 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:25 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:25 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:25 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:25 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:25 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:25 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:25 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:25 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:25 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:25 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:25 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:25 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:25 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:25 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:25 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:25 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:25 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:25 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:25 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:25 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:25 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:25 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:25 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:25 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:25 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:25 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.130557 (min) 0.224175 (max)
57:25 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.00771701 (min) 0.389873 (max)
57:25 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:25 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -7.78802 (min) -6.47596 (max)
57:25 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -2.53337 (min) -1.93942 (max)
57:25 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:25 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.88253 (min) 30.8666 (max)
57:25 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:25 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.7557 (min) 15.1537 (max)
57:25 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 27.0029 (min) 32.5927 (max)
57:25 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.0001896 (min) 7.9866e-05 (max)
57:25 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:25 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:25 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:25 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:25 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:25 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:25 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:25 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:25 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:25 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:25 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:25 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:25 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:25 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 6
57:25 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 2 0 0]
57:25 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 0 3 3]
57:25 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 403.   0.]
 [  0.   0.   0.   0.   0.]
 [ 61.   0.   0. 217.   0.]
 [  8.   0. 377.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:25 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:25 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:25 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:25 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:25 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.04831655034731701
57:25 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:25 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:25 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:25 DEBUG   opendrift.models.oceandrift:618: 22 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:618: 21 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:25 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:25 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:618: 20 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:25 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:25 DEBUG   opendrift.models.oceandrift:618: 19 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:25 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:25 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:25 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:25 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:25 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:25 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 17
57:25 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:25 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 17 elements
57:25 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:25 INFO    opendrift.models.chemicaldrift:1861: partitioning: [115, 0, 162, 223, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:25 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:25 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:25 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:25 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:25 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:25 INFO    opendrift.models.basemodel:2042: 2024-06-22 08:26:45.968543 - step 36 of 96 - 500 active elements (0 deactivated)
57:25 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:25 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:25 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.74969646270938
57:25 DEBUG   opendrift.models.basemodel:2066:               10.514551856258205 <- longitude -> 10.747146382924752
57:25 DEBUG   opendrift.models.basemodel:2071:               -27.650671207272065   <- z ->   -0.26791438528988804
57:25 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:25 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:25 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:25 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:25 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:25 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:25 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:25 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:25 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-22 08:00:00 (before)
                2024-06-22 09:00:00 (after)
57:26 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
57:26 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
57:26 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
57:26 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
57:26 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
57:26 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_salinity']
57:26 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 52x35x7) for time after (2024-06-22 09:00:00)
57:26 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-22 08:00:00) in space  (linearNDFast)
57:26 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:26 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-22 09:00:00) in space  (linearNDFast)
57:26 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:26 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-22 08:00:00, weight 0.55) and
                      after (2024-06-22 09:00:00, weight 0.45) in time
57:26 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:26 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.25286465023637 degrees.
57:26 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.25286465023637 degrees.
57:26 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:26 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:26 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:26 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:26 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:26 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:26 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:26 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:26 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:26 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:26 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:26 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:26 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:26 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:26 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:26 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:26 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:26 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:26 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:26 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:26 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:26 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:26 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:26 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:26 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:26 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:26 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:26 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:26 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:26 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.143774 (min) 0.262196 (max)
57:26 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.0394439 (min) 0.405887 (max)
57:26 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:26 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -7.55638 (min) -6.90545 (max)
57:26 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -2.4204 (min) -2.01998 (max)
57:26 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:26 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.88253 (min) 31.6227 (max)
57:26 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:26 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.763 (min) 15.1443 (max)
57:26 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 26.7982 (min) 32.8651 (max)
57:26 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000215703 (min) 5.54129e-05 (max)
57:26 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:26 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:26 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:26 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:26 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:26 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:26 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:26 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:26 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:26 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:26 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:26 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:26 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:26 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 13
57:26 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 2 0 0 0 0 0 0 0 0]
57:26 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 0 3 3 3 3 3 3 3 3]
57:26 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 415.   0.]
 [  0.   0.   0.   0.   0.]
 [ 62.   0.   0. 222.   0.]
 [  8.   0. 394.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:26 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:26 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:26 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:26 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:26 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.04521026657634923
57:26 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:26 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:26 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:26 DEBUG   opendrift.models.oceandrift:618: 24 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:26 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:26 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:26 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:26 DEBUG   opendrift.models.oceandrift:618: 23 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:26 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:26 DEBUG   opendrift.models.oceandrift:618: 19 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:26 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:26 DEBUG   opendrift.models.oceandrift:618: 19 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:618: 19 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:618: 24 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:618: 22 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:636: 3 elements reached seafloor, interacting with bottom
57:26 DEBUG   opendrift.models.basemodel:759: Lifting 3 elements to seafloor.
57:26 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:618: 20 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:26 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:26 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:618: 25 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:618: 21 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:26 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:26 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:618: 22 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:618: 20 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:26 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 14
57:26 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:26 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 14 elements
57:26 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:26 INFO    opendrift.models.chemicaldrift:1861: partitioning: [104, 0, 166, 230, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:26 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:26 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:26 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:26 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:26 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:26 INFO    opendrift.models.basemodel:2042: 2024-06-22 08:56:45.968543 - step 37 of 96 - 500 active elements (0 deactivated)
57:26 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:26 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:26 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.75210309427511
57:26 DEBUG   opendrift.models.basemodel:2066:               10.514551856258208 <- longitude -> 10.746698056297046
57:26 DEBUG   opendrift.models.basemodel:2071:               -24.552091879133403   <- z ->   -0.212338094966121
57:26 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:26 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:26 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:26 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:26 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:26 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:26 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:26 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:26 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-22 08:00:00 (before)
                2024-06-22 09:00:00 (after)
57:26 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-22 08:00:00) in space  (linearNDFast)
57:26 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:26 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
/root/project/opendrift/readers/interpolation/interpolators.py:17: RuntimeWarning: overflow encountered in cast
  data[mask] = np.finfo(np.float64).min
57:26 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:26 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:26 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:26 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:26 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:26 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:26 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-22 09:00:00) in space  (linearNDFast)
57:26 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:26 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:26 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:26 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:26 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:26 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:26 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:26 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:26 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-22 08:00:00, weight 0.05) and
                      after (2024-06-22 09:00:00, weight 0.95) in time
57:26 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:26 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.25331296534106 degrees.
57:26 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.25331296534106 degrees.
57:26 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:26 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:26 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:26 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:26 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:26 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:26 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:26 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:26 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:26 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:26 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:26 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:26 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:26 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:26 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:26 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:26 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:26 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:26 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:26 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:26 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:26 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:26 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:26 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:26 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:26 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:26 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:26 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:26 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:26 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.19129 (min) 0.290933 (max)
57:26 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.0695223 (min) 0.41238 (max)
57:26 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:26 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -7.67551 (min) -7.15951 (max)
57:26 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -2.42028 (min) -1.81063 (max)
57:26 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:26 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.88253 (min) 32.2162 (max)
57:26 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:26 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.7705 (min) 15.1496 (max)
57:26 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 26.1438 (min) 32.7823 (max)
57:26 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000274182 (min) 1.87406e-05 (max)
57:26 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:26 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:26 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:26 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:26 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:26 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:26 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:26 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:26 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:26 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:26 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:26 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:26 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:26 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 7
57:26 DEBUG   opendrift.models.chemicaldrift:1452: old species: [3 0 0 0 0 0 0]
57:26 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 3 3 3 3 3]
57:26 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 421.   0.]
 [  0.   0.   0.   0.   0.]
 [ 62.   0.   0. 231.   0.]
 [  9.   0. 408.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:26 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:26 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:26 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:26 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:26 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.04673199621472799
57:26 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:26 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:26 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:26 DEBUG   opendrift.models.oceandrift:618: 19 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:26 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:26 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:618: 18 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:618: 20 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:26 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:26 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:618: 18 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:618: 19 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:26 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:26 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:618: 19 elements penetrated seafloor, lifting up
57:26 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:26 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 7
57:26 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:26 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 7 elements
57:26 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:26 INFO    opendrift.models.chemicaldrift:1861: partitioning: [99, 0, 170, 231, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:26 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:26 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:26 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:26 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:26 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:26 INFO    opendrift.models.basemodel:2042: 2024-06-22 09:26:45.968543 - step 38 of 96 - 500 active elements (0 deactivated)
57:26 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:26 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:26 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.75472253489025
57:26 DEBUG   opendrift.models.basemodel:2066:               10.514551856258208 <- longitude -> 10.747883501449692
57:26 DEBUG   opendrift.models.basemodel:2071:               -24.386944812380726   <- z ->   -0.23216476120625268
57:26 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:26 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:26 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:26 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:26 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:26 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:26 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:26 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:26 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-22 09:00:00 (before)
                2024-06-22 10:00:00 (after)
57:29 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
57:29 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
57:29 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
57:29 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
57:29 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
57:29 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_salinity']
57:29 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 52x35x7) for time after (2024-06-22 10:00:00)
57:29 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-22 09:00:00) in space  (linearNDFast)
57:29 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:29 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-22 10:00:00) in space  (linearNDFast)
57:29 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:29 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:29 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-22 09:00:00, weight 0.55) and
                      after (2024-06-22 10:00:00, weight 0.45) in time
57:29 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:29 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.25212751692347 degrees.
57:29 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.25212751692347 degrees.
57:29 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:29 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:29 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:29 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:29 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:29 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:29 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:29 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:29 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:29 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:29 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:29 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:29 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:29 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:29 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:29 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:29 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:29 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:29 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:29 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:29 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:29 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:29 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:29 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:29 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:29 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:29 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:29 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:29 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:29 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.154201 (min) 0.31778 (max)
57:29 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.0859868 (min) 0.442888 (max)
57:29 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:29 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -7.42624 (min) -6.50109 (max)
57:29 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -1.77125 (min) -1.39492 (max)
57:29 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:29 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.88253 (min) 33.1882 (max)
57:29 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:29 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.7803 (min) 15.1522 (max)
57:29 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 26.1933 (min) 32.5066 (max)
57:29 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000298718 (min) 2.11433e-06 (max)
57:29 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:29 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:29 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:29 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:29 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:29 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:29 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:29 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:29 DEBUG   opendrift.models.basemodel:759: Lifting 3 elements to seafloor.
57:29 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:29 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:29 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:29 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:29 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 9
57:29 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 2 2 2 0 0 0 2]
57:29 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 0 0 0 3 3 3 0]
57:29 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 425.   0.]
 [  0.   0.   0.   0.   0.]
 [ 67.   0.   0. 234.   0.]
 [  9.   0. 415.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:29 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:29 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:29 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:29 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:29 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.042081585581932736
57:29 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:29 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:29 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:29 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:618: 19 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:29 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:29 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:29 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:29 DEBUG   opendrift.models.oceandrift:618: 18 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:618: 19 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:618: 19 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:618: 23 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:618: 18 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:618: 20 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:618: 19 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:29 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:29 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:29 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:29 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:29 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 6
57:29 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:29 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 6 elements
57:29 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:29 INFO    opendrift.models.chemicaldrift:1861: partitioning: [100, 0, 167, 233, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:29 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:29 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:29 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:29 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:29 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:29 INFO    opendrift.models.basemodel:2042: 2024-06-22 09:56:45.968543 - step 39 of 96 - 500 active elements (0 deactivated)
57:29 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:29 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:29 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.7586488060255
57:29 DEBUG   opendrift.models.basemodel:2066:               10.514551856258208 <- longitude -> 10.752067312487664
57:29 DEBUG   opendrift.models.basemodel:2071:               -23.070372145391573   <- z ->   -0.18860299290706134
57:29 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:29 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:29 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:29 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:29 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:29 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:29 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:29 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:29 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-22 09:00:00 (before)
                2024-06-22 10:00:00 (after)
57:29 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-22 09:00:00) in space  (linearNDFast)
57:29 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:29 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-22 10:00:00) in space  (linearNDFast)
57:29 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:29 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-22 09:00:00, weight 0.05) and
                      after (2024-06-22 10:00:00, weight 0.95) in time
57:29 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:29 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.247943696575675 degrees.
57:29 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.247943696575675 degrees.
57:29 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:29 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:29 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:29 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:29 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:29 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:29 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:29 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:29 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:29 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:29 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:29 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:29 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:29 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:29 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:29 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:29 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:29 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:29 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:29 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:29 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:29 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:29 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:29 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:29 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:29 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:29 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:29 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:29 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:29 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.0991099 (min) 0.314995 (max)
57:29 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.117566 (min) 0.468913 (max)
57:29 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:29 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -7.15881 (min) -5.70476 (max)
57:29 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -1.10463 (min) -0.840759 (max)
57:29 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:29 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.77013 (min) 35.4122 (max)
57:29 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:29 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.7903 (min) 15.1659 (max)
57:29 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 26.3986 (min) 32.2593 (max)
57:29 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000362115 (min) -2.60846e-06 (max)
57:29 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:29 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:29 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:29 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:29 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:29 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:29 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:29 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:29 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:29 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:29 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:29 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:29 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:29 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 6
57:29 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 2 2 0]
57:29 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 0 0 3]
57:29 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 429.   0.]
 [  0.   0.   0.   0.   0.]
 [ 69.   0.   0. 238.   0.]
 [  9.   0. 421.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:29 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:29 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:29 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:29 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:29 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.03779624192434462
57:29 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:29 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:29 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:29 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:29 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:29 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:29 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:29 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:29 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:29 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:29 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:29 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:618: 18 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:29 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:29 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:29 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:29 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 6
57:29 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:29 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 6 elements
57:29 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:29 INFO    opendrift.models.chemicaldrift:1861: partitioning: [98, 0, 166, 236, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:29 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:29 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:29 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:29 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:29 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:29 INFO    opendrift.models.basemodel:2042: 2024-06-22 10:26:45.968543 - step 40 of 96 - 500 active elements (0 deactivated)
57:29 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:29 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:29 DEBUG   opendrift.models.basemodel:2061:               57.55687017680575 <- latitude  -> 57.76190192121278
57:29 DEBUG   opendrift.models.basemodel:2066:               10.514551856258205 <- longitude -> 10.752216466651346
57:29 DEBUG   opendrift.models.basemodel:2071:               -23.939984557621464   <- z ->   -0.5290413437593402
57:29 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:29 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:29 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:29 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:29 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:29 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:29 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:29 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:29 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-22 10:00:00 (before)
                2024-06-22 11:00:00 (after)
57:31 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
57:31 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
57:31 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
57:31 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
57:31 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
57:31 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_salinity']
57:31 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 53x35x7) for time after (2024-06-22 11:00:00)
57:31 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-22 10:00:00) in space  (linearNDFast)
57:31 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:31 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-22 11:00:00) in space  (linearNDFast)
57:31 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:31 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-22 10:00:00, weight 0.55) and
                      after (2024-06-22 11:00:00, weight 0.45) in time
57:31 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:31 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.24779454486012 degrees.
57:31 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.24779454486012 degrees.
57:31 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:31 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:31 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:31 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:31 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:31 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:31 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:31 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:31 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:31 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:31 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:31 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:31 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:31 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:31 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:31 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:31 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:31 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:31 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:31 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:31 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:31 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:31 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:31 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:31 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:31 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:31 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:31 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:31 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:31 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.106035 (min) 0.283327 (max)
57:31 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.116102 (min) 0.504629 (max)
57:31 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:31 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -6.75628 (min) -4.88365 (max)
57:31 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -0.51048 (min) 0.242482 (max)
57:31 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:31 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.67313 (min) 37.518 (max)
57:31 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:31 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.7958 (min) 15.1801 (max)
57:31 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 26.0672 (min) 32.1535 (max)
57:31 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000308446 (min) 0.000185037 (max)
57:31 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:31 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:31 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:31 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:31 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:31 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:31 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:31 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:31 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:31 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:31 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:31 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:31 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:31 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 10
57:31 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 2 0 0 0 2 0 0 0]
57:31 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 0 3 3 3 0 3 3 3]
57:31 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 437.   0.]
 [  0.   0.   0.   0.   0.]
 [ 71.   0.   0. 243.   0.]
 [  9.   0. 427.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:31 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:31 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:31 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:31 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:31 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.033045929930904945
57:31 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:31 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:31 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:31 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:31 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:31 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:31 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:31 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:31 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:31 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:31 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 6
57:31 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:31 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 6 elements
57:31 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:31 INFO    opendrift.models.chemicaldrift:1861: partitioning: [92, 0, 167, 241, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:31 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:31 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:31 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:31 DEBUG   opendrift.models.basemodel:759: Lifting 7 elements to seafloor.
57:31 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:31 INFO    opendrift.models.basemodel:2042: 2024-06-22 10:56:45.968543 - step 41 of 96 - 500 active elements (0 deactivated)
57:31 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:31 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:31 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.76670958943436
57:31 DEBUG   opendrift.models.basemodel:2066:               10.514551856258212 <- longitude -> 10.75307754064609
57:31 DEBUG   opendrift.models.basemodel:2071:               -26.334548131503123   <- z ->   -0.29591777370239203
57:31 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:31 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:31 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:31 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:31 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:31 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:31 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:31 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:31 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-22 10:00:00 (before)
                2024-06-22 11:00:00 (after)
57:31 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-22 10:00:00) in space  (linearNDFast)
57:31 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:31 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-22 11:00:00) in space  (linearNDFast)
57:31 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:31 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:31 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:31 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:31 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:31 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:31 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:31 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:31 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-22 10:00:00, weight 0.05) and
                      after (2024-06-22 11:00:00, weight 0.95) in time
57:31 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:31 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.24693347810135 degrees.
57:31 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.24693347810135 degrees.
57:31 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:31 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:31 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:31 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:31 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:31 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:31 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:31 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:31 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:31 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:31 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:31 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:31 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:31 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:31 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:31 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:31 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:31 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:31 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:31 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:31 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:31 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:31 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:31 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:31 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:31 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:31 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:31 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:31 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:31 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.104964 (min) 0.264907 (max)
57:31 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.140381 (min) 0.528922 (max)
57:31 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:31 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -6.39237 (min) -4.05954 (max)
57:31 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: 0.0318337 (min) 1.36317 (max)
57:31 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:31 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.58711 (min) 41.5364 (max)
57:31 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:31 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.8008 (min) 15.2038 (max)
57:31 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 25.8507 (min) 32.7111 (max)
57:31 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000290802 (min) 0.0001834 (max)
57:31 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:31 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:31 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:31 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:31 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:31 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:31 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:31 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:31 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:31 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:31 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:31 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:31 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:31 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 12
57:31 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 2 0 0 2 2 0 2 2 2 2]
57:31 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 0 3 3 0 0 3 0 0 0 0]
57:31 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 441.   0.]
 [  0.   0.   0.   0.   0.]
 [ 79.   0.   0. 246.   0.]
 [  9.   0. 433.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:31 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:31 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:31 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:31 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:31 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.029709199066086094
57:31 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:31 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:31 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:31 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:31 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:31 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:31 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:31 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:618: 1 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:31 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:31 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:31 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:31 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:31 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:31 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 5
57:31 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:31 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 5 elements
57:31 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:31 INFO    opendrift.models.chemicaldrift:1861: partitioning: [96, 0, 160, 244, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:31 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:31 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:31 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:31 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:31 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:31 INFO    opendrift.models.basemodel:2042: 2024-06-22 11:26:45.968543 - step 42 of 96 - 500 active elements (0 deactivated)
57:31 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:31 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:31 DEBUG   opendrift.models.basemodel:2061:               57.55687017680575 <- latitude  -> 57.77265947940794
57:31 DEBUG   opendrift.models.basemodel:2066:               10.514551856258215 <- longitude -> 10.752991747374885
57:31 DEBUG   opendrift.models.basemodel:2071:               -22.8642635345459   <- z ->   -0.1734206893329825
57:31 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:31 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:31 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:31 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:31 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:31 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:31 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:31 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:31 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-22 11:00:00 (before)
                2024-06-22 12:00:00 (after)
57:32 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
57:32 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
57:32 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
57:32 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
57:32 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
57:32 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_salinity']
57:32 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 54x35x7) for time after (2024-06-22 12:00:00)
57:32 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-22 11:00:00) in space  (linearNDFast)
57:32 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:32 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-22 12:00:00) in space  (linearNDFast)
57:32 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:32 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:32 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:32 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:32 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:32 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:32 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:32 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:32 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-22 11:00:00, weight 0.55) and
                      after (2024-06-22 12:00:00, weight 0.45) in time
57:32 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:32 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.24701927764933 degrees.
57:32 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.24701927764933 degrees.
57:32 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:32 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:32 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:32 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:32 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:32 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:32 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:32 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:32 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:32 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:32 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:32 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:32 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:32 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:32 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:32 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:32 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:32 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:32 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:32 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:32 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:32 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:32 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:32 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:32 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:32 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:32 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:32 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:32 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:32 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.0531427 (min) 0.232828 (max)
57:32 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.136438 (min) 0.534954 (max)
57:32 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:32 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -5.95613 (min) -3.69102 (max)
57:32 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: 0.648707 (min) 1.42371 (max)
57:32 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:32 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.50079 (min) 46.6886 (max)
57:32 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:32 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.8058 (min) 15.2234 (max)
57:32 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 25.853 (min) 32.3795 (max)
57:32 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000249154 (min) 0.000495724 (max)
57:32 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:32 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:32 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:32 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:32 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:32 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:32 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:32 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:32 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:32 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:32 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:32 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:32 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:32 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 5
57:32 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 0 0]
57:32 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 3 3]
57:32 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 446.   0.]
 [  0.   0.   0.   0.   0.]
 [ 79.   0.   0. 250.   0.]
 [  9.   0. 438.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:32 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:32 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:32 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:32 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:32 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.02616009705067868
57:32 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:32 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:32 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:32 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:32 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:32 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:32 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:32 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:32 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:32 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:32 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:32 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:32 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:32 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:32 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:32 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:32 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 4
57:32 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:32 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 4 elements
57:32 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:32 INFO    opendrift.models.chemicaldrift:1861: partitioning: [91, 0, 156, 253, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:32 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:32 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:32 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:32 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:32 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:32 INFO    opendrift.models.basemodel:2042: 2024-06-22 11:56:45.968543 - step 43 of 96 - 500 active elements (0 deactivated)
57:32 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:32 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:32 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.775799266886416
57:32 DEBUG   opendrift.models.basemodel:2066:               10.514551856258215 <- longitude -> 10.755773143982069
57:32 DEBUG   opendrift.models.basemodel:2071:               -30.64027747163771   <- z ->   -0.22404771224730902
57:32 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:32 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:32 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:32 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:32 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:32 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:32 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:32 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:32 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-22 11:00:00 (before)
                2024-06-22 12:00:00 (after)
57:32 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-22 11:00:00) in space  (linearNDFast)
57:32 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:32 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:32 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:32 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:32 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:32 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:32 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:32 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:32 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-22 12:00:00) in space  (linearNDFast)
57:32 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:32 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:32 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:32 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:32 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:32 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:32 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:32 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:32 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-22 11:00:00, weight 0.05) and
                      after (2024-06-22 12:00:00, weight 0.95) in time
57:32 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:32 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.24423786312762 degrees.
57:32 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.24423786312762 degrees.
57:32 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:32 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:32 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:32 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:32 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:32 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:32 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:32 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:32 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:32 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:32 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:32 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:32 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:32 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:32 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:32 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:32 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:32 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:32 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:32 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:32 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:32 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:32 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:32 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:32 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:32 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:32 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:32 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:32 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:32 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.0749297 (min) 0.194221 (max)
57:32 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.147447 (min) 0.557787 (max)
57:32 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:32 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -5.47119 (min) -2.91674 (max)
57:32 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: 1.09992 (min) 1.49944 (max)
57:32 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:32 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.44394 (min) 49.6209 (max)
57:32 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:32 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.8108 (min) 15.2445 (max)
57:32 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 25.4514 (min) 32.8507 (max)
57:32 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000220543 (min) 0.000642891 (max)
57:32 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:32 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:32 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:32 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:32 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:32 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:32 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:32 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:32 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:32 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:32 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:32 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:32 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:32 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 4
57:32 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 2 2]
57:32 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 0 0]
57:32 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 446.   0.]
 [  0.   0.   0.   0.   0.]
 [ 83.   0.   0. 258.   0.]
 [  9.   0. 442.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:32 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:32 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:32 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:32 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:32 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.022511547338437247
57:32 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:32 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:32 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:32 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:32 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:32 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:32 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:32 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:32 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:32 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:32 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:32 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
57:32 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:32 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:32 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:32 INFO    opendrift.models.chemicaldrift:1861: partitioning: [95, 0, 149, 256, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:32 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:32 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:32 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:32 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:32 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:32 INFO    opendrift.models.basemodel:2042: 2024-06-22 12:26:45.968543 - step 44 of 96 - 500 active elements (0 deactivated)
57:32 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:32 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:32 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.78179811281917
57:32 DEBUG   opendrift.models.basemodel:2066:               10.514551856258212 <- longitude -> 10.760168477459143
57:32 DEBUG   opendrift.models.basemodel:2071:               -28.264658017307028   <- z ->   -0.06871542566702064
57:32 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:32 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:32 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:32 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:32 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:32 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:32 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:32 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:32 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-22 12:00:00 (before)
                2024-06-22 13:00:00 (after)
57:37 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
57:37 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
57:37 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
57:37 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
57:37 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
57:37 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_salinity']
57:37 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 55x36x7) for time after (2024-06-22 13:00:00)
57:37 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-22 12:00:00) in space  (linearNDFast)
57:37 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:37 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-22 13:00:00) in space  (linearNDFast)
57:37 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:37 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:37 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:37 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:37 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:37 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:37 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:37 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:37 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:37 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:37 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:37 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:37 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:37 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:37 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:37 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-22 12:00:00, weight 0.55) and
                      after (2024-06-22 13:00:00, weight 0.45) in time
57:37 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:37 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.23984253022931 degrees.
57:37 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48545923318216 and -59.23984253022931 degrees.
57:37 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:37 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:37 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:37 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:37 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:37 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:37 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:37 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:37 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:37 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:37 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:37 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:37 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:37 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:37 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:37 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:37 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:37 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:37 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:37 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:37 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:37 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:37 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:37 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:37 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:37 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:37 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:37 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:37 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:37 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.107354 (min) 0.198084 (max)
57:37 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.19734 (min) 0.499437 (max)
57:37 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:37 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -5.57686 (min) -3.13364 (max)
57:37 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: 0.699134 (min) 1.03168 (max)
57:37 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:37 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.40673 (min) 55.3393 (max)
57:37 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:37 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.8145 (min) 15.2694 (max)
57:37 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 25.4207 (min) 32.9283 (max)
57:37 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000149562 (min) 0.000848909 (max)
57:37 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:37 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:37 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:37 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:37 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:37 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:37 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:37 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:37 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:37 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:37 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:37 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:37 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:37 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 9
57:37 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 3 0 2 0 2 2 0]
57:37 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 0 3 0 3 0 0 3]
57:37 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 450.   0.]
 [  0.   0.   0.   0.   0.]
 [ 87.   0.   0. 261.   0.]
 [ 10.   0. 442.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:37 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:37 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:37 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:38 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:38 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.02285796114055307
57:38 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:38 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:38 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:38 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:618: 1 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:38 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:38 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:38 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:38 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:38 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 10
57:38 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:38 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 10 elements
57:38 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:38 INFO    opendrift.models.chemicaldrift:1861: partitioning: [96, 0, 153, 251, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:38 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:38 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:38 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:38 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:38 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:38 INFO    opendrift.models.basemodel:2042: 2024-06-22 12:56:45.968543 - step 45 of 96 - 500 active elements (0 deactivated)
57:38 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:38 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:38 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.78614219750895
57:38 DEBUG   opendrift.models.basemodel:2066:               10.513936639681985 <- longitude -> 10.764096328211318
57:38 DEBUG   opendrift.models.basemodel:2071:               -27.96608589604849   <- z ->   -0.04107709319026499
57:38 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:38 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:38 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:38 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:38 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:38 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:38 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:38 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:38 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-22 12:00:00 (before)
                2024-06-22 13:00:00 (after)
57:38 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-22 12:00:00) in space  (linearNDFast)
57:38 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:38 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-22 13:00:00) in space  (linearNDFast)
57:38 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:38 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-22 12:00:00, weight 0.05) and
                      after (2024-06-22 13:00:00, weight 0.95) in time
57:38 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:38 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.486074450610595 and -59.23591468838093 degrees.
57:38 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.486074450610595 and -59.23591468838093 degrees.
57:38 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:38 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:38 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:38 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:38 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:38 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:38 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:38 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:38 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:38 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:38 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:38 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:38 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:38 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:38 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:38 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:38 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:38 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:38 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:38 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:38 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:38 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:38 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:38 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:38 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:38 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:38 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:38 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:38 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:38 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.135084 (min) 0.201007 (max)
57:38 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.177099 (min) 0.538952 (max)
57:38 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:38 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -5.70057 (min) -3.02743 (max)
57:38 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: 0.0741329 (min) 0.575345 (max)
57:38 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:38 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.37368 (min) 59.535 (max)
57:38 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:38 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.8181 (min) 15.2874 (max)
57:38 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 25.377 (min) 33.075 (max)
57:38 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000148902 (min) 0.00100583 (max)
57:38 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:38 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:38 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:38 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:38 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:38 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:38 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:38 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:38 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:38 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:38 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:38 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:38 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:38 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 3
57:38 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 2]
57:38 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 0]
57:38 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 451.   0.]
 [  0.   0.   0.   0.   0.]
 [ 89.   0.   0. 263.   0.]
 [ 10.   0. 452.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:38 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:38 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:38 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:38 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:38 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.02355425212375748
57:38 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:38 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:38 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:38 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:38 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:38 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:38 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:38 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:38 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:38 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:38 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:38 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 21
57:38 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:38 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 21 elements
57:38 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:38 INFO    opendrift.models.chemicaldrift:1861: partitioning: [97, 0, 169, 234, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:38 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:38 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:38 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:38 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:38 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:38 INFO    opendrift.models.basemodel:2042: 2024-06-22 13:26:45.968543 - step 46 of 96 - 500 active elements (0 deactivated)
57:38 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:38 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:38 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.79100417773423
57:38 DEBUG   opendrift.models.basemodel:2066:               10.513855162050852 <- longitude -> 10.766940001888193
57:38 DEBUG   opendrift.models.basemodel:2071:               -28.658809790952628   <- z ->   0.0
57:38 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:38 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:38 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:38 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:38 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:38 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:38 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:38 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:38 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-22 13:00:00 (before)
                2024-06-22 14:00:00 (after)
57:39 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
57:39 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
57:39 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
57:39 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
57:39 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
57:39 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_salinity']
57:39 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 57x36x7) for time after (2024-06-22 14:00:00)
57:39 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-22 13:00:00) in space  (linearNDFast)
57:39 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:39 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-22 14:00:00) in space  (linearNDFast)
57:39 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:39 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:39 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:39 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:39 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:39 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:39 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:39 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:39 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
57:39 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
57:39 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
57:39 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
57:39 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
57:39 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
57:39 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
57:39 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-22 13:00:00, weight 0.55) and
                      after (2024-06-22 14:00:00, weight 0.45) in time
57:39 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:39 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592173097 and -59.23307100617138 degrees.
57:39 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592173097 and -59.23307100617138 degrees.
57:39 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:39 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:39 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:39 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:39 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:39 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:39 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:39 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:39 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:39 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:39 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:39 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:39 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:39 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:39 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:39 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:39 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:39 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:39 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:39 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:39 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:39 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:39 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:39 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:39 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:39 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:39 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:39 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:39 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:39 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.159117 (min) 0.205519 (max)
57:39 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.21784 (min) 0.529249 (max)
57:39 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:39 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -5.42765 (min) -3.28701 (max)
57:39 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -0.345924 (min) 0.139262 (max)
57:39 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:39 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.32695 (min) 64.2219 (max)
57:39 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:39 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.823 (min) 15.3128 (max)
57:39 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 25.2491 (min) 33.1074 (max)
57:39 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -8.76646e-05 (min) 0.00100377 (max)
57:39 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:39 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:39 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:39 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:39 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:39 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:39 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:39 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:39 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:39 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:39 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:39 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:39 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:39 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 3
57:39 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 2]
57:39 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 0]
57:39 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 452.   0.]
 [  0.   0.   0.   0.   0.]
 [ 91.   0.   0. 266.   0.]
 [ 10.   0. 473.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:39 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:39 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:39 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:39 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:39 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.021291862475425933
57:39 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:39 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:39 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:39 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:39 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:39 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:39 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:39 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:39 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:39 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:39 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:39 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:39 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:39 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:39 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:39 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:39 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
57:39 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:39 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:39 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
57:39 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
57:39 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:39 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:39 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:39 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:39 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:39 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:39 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:39 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:39 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:39 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:39 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:39 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:39 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:39 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:39 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:39 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:39 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:39 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:39 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:39 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:39 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:39 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:39 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 92
57:39 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:39 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 92 elements
57:39 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:39 INFO    opendrift.models.chemicaldrift:1861: partitioning: [98, 0, 253, 149, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:39 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:39 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:39 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:39 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:39 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:39 INFO    opendrift.models.basemodel:2042: 2024-06-22 13:56:45.968543 - step 47 of 96 - 500 active elements (0 deactivated)
57:39 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:39 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:39 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.790372459791676
57:39 DEBUG   opendrift.models.basemodel:2066:               10.513855162050852 <- longitude -> 10.768855016684494
57:39 DEBUG   opendrift.models.basemodel:2071:               -32.70899222631262   <- z ->   0.0
57:39 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:39 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:39 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:39 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:39 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:39 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:39 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:39 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:39 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-22 13:00:00 (before)
                2024-06-22 14:00:00 (after)
57:39 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-22 13:00:00) in space  (linearNDFast)
57:39 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:40 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-22 14:00:00) in space  (linearNDFast)
57:40 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:40 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-22 13:00:00, weight 0.05) and
                      after (2024-06-22 14:00:00, weight 0.95) in time
57:40 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:40 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592349755 and -59.231155996004546 degrees.
57:40 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592349755 and -59.231155996004546 degrees.
57:40 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:40 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:40 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:40 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:40 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:40 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:40 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:40 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:40 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:40 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:40 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:40 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:40 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:40 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:40 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:40 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:40 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:40 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:40 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:40 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:40 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:40 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:40 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:40 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:40 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:40 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:40 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:40 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:40 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:40 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.178664 (min) 0.24609 (max)
57:40 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.229755 (min) 0.495542 (max)
57:40 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:40 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -5.12466 (min) -3.41691 (max)
57:40 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -0.786998 (min) -0.0966884 (max)
57:40 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:40 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.29478 (min) 63.633 (max)
57:40 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:40 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.8242 (min) 15.3202 (max)
57:40 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 25.2601 (min) 33.1949 (max)
57:40 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -5.56153e-05 (min) 0.00106766 (max)
57:40 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:40 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:40 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:40 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:40 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:40 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:40 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:40 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:40 DEBUG   opendrift.models.basemodel:759: Lifting 3 elements to seafloor.
57:40 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:40 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:40 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:40 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:40 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 3
57:40 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0]
57:40 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3]
57:40 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 455.   0.]
 [  0.   0.   0.   0.   0.]
 [ 91.   0.   0. 272.   0.]
 [ 10.   0. 565.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:40 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:40 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:40 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:40 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:40 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.019020503699387663
57:40 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:40 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:40 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:40 DEBUG   opendrift.models.oceandrift:618: 28 elements penetrated seafloor, lifting up
57:40 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:40 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:40 DEBUG   opendrift.models.oceandrift:618: 24 elements penetrated seafloor, lifting up
57:40 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:40 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:40 DEBUG   opendrift.models.oceandrift:618: 18 elements penetrated seafloor, lifting up
57:40 DEBUG   opendrift.models.oceandrift:636: 3 elements reached seafloor, interacting with bottom
57:40 DEBUG   opendrift.models.basemodel:759: Lifting 3 elements to seafloor.
57:40 DEBUG   opendrift.models.oceandrift:618: 26 elements penetrated seafloor, lifting up
57:40 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:40 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:40 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:40 DEBUG   opendrift.models.oceandrift:636: 3 elements reached seafloor, interacting with bottom
57:40 DEBUG   opendrift.models.basemodel:759: Lifting 3 elements to seafloor.
57:40 DEBUG   opendrift.models.oceandrift:618: 19 elements penetrated seafloor, lifting up
57:40 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:40 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:40 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:40 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:40 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:40 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:40 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:40 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:40 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:40 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:40 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:40 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:40 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:40 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:40 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:40 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:40 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:40 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:40 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:40 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:40 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:40 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:40 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:40 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:40 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:40 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:40 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:40 DEBUG   opendrift.models.oceandrift:636: 3 elements reached seafloor, interacting with bottom
57:40 DEBUG   opendrift.models.basemodel:759: Lifting 3 elements to seafloor.
57:40 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:40 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:40 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:40 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:40 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:40 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:40 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:40 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:40 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:40 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:40 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:40 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:40 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:40 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:40 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:40 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:40 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:40 DEBUG   opendrift.models.oceandrift:618: 18 elements penetrated seafloor, lifting up
57:40 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:40 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:40 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:40 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 85
57:40 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:40 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 85 elements
57:40 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:40 INFO    opendrift.models.chemicaldrift:1861: partitioning: [95, 0, 311, 94, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:40 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:40 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:40 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:40 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:40 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:40 INFO    opendrift.models.basemodel:2042: 2024-06-22 14:26:45.968543 - step 48 of 96 - 500 active elements (0 deactivated)
57:40 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:40 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:40 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.79181092454787
57:40 DEBUG   opendrift.models.basemodel:2066:               10.513855162050852 <- longitude -> 10.776294747667587
57:40 DEBUG   opendrift.models.basemodel:2071:               -31.41892464743595   <- z ->   -0.02059723044951539
57:40 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:40 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:40 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:40 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:40 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:40 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:40 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:40 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:40 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-22 14:00:00 (before)
                2024-06-22 15:00:00 (after)
57:41 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
57:41 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
57:41 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
57:41 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
57:41 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
57:41 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_salinity']
57:41 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 57x36x7) for time after (2024-06-22 15:00:00)
57:41 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-22 14:00:00) in space  (linearNDFast)
57:41 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:41 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-22 15:00:00) in space  (linearNDFast)
57:41 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:41 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:41 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-22 14:00:00, weight 0.55) and
                      after (2024-06-22 15:00:00, weight 0.45) in time
57:41 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:41 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592349755 and -59.22371626728551 degrees.
57:41 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592349755 and -59.22371626728551 degrees.
57:41 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:41 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:41 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:41 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:41 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:41 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:41 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:41 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:41 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:41 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:41 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:41 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:41 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:41 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:41 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:41 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:41 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:41 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:41 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:41 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:41 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:41 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:41 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:41 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:41 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:41 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:41 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:41 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:41 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:41 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.184737 (min) 0.263331 (max)
57:41 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.236995 (min) 0.487283 (max)
57:41 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:41 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -4.58274 (min) -2.93627 (max)
57:41 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -0.968854 (min) -0.38648 (max)
57:41 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:41 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.29478 (min) 65.1728 (max)
57:41 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:41 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.833 (min) 15.3368 (max)
57:41 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 25.0561 (min) 33.1716 (max)
57:41 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -3.22265e-06 (min) 0.000960142 (max)
57:41 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:41 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:41 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:41 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:41 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:41 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:41 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:41 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:41 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:41 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:41 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:41 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:41 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:41 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 10
57:41 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 2 0 2 0 0 0 0 2]
57:41 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 0 3 0 3 3 3 3 0]
57:41 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 460.   0.]
 [  0.   0.   0.   0.   0.]
 [ 96.   0.   0. 299.   0.]
 [ 10.   0. 650.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:41 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:41 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:41 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:41 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:41 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.01532481002067044
57:41 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:41 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:41 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:41 DEBUG   opendrift.models.oceandrift:618: 28 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:618: 27 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:41 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:41 DEBUG   opendrift.models.oceandrift:618: 30 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:636: 3 elements reached seafloor, interacting with bottom
57:41 DEBUG   opendrift.models.basemodel:759: Lifting 3 elements to seafloor.
57:41 DEBUG   opendrift.models.oceandrift:618: 23 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:41 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:41 DEBUG   opendrift.models.oceandrift:618: 18 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:41 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:41 DEBUG   opendrift.models.oceandrift:618: 19 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:636: 3 elements reached seafloor, interacting with bottom
57:41 DEBUG   opendrift.models.basemodel:759: Lifting 3 elements to seafloor.
57:41 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:618: 18 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:618: 22 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:41 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:41 DEBUG   opendrift.models.oceandrift:618: 22 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:618: 20 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:41 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:41 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:41 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:41 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:41 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:41 DEBUG   opendrift.models.oceandrift:618: 20 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:41 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:41 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:41 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:41 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:41 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:41 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:41 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:41 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:41 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:41 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:41 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:41 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:41 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:41 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:41 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:41 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:41 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:41 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 30
57:41 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:41 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 30 elements
57:41 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:41 INFO    opendrift.models.chemicaldrift:1861: partitioning: [95, 0, 310, 95, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:41 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:41 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:41 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:41 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:41 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:41 INFO    opendrift.models.basemodel:2042: 2024-06-22 14:56:45.968543 - step 49 of 96 - 500 active elements (0 deactivated)
57:41 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:41 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:41 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.79634064147727
57:41 DEBUG   opendrift.models.basemodel:2066:               10.513855162050852 <- longitude -> 10.784256887736104
57:41 DEBUG   opendrift.models.basemodel:2071:               -26.371185037204313   <- z ->   -0.10219013556446721
57:41 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:41 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:41 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:41 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:41 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:41 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:41 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:41 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:41 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-22 14:00:00 (before)
                2024-06-22 15:00:00 (after)
57:41 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-22 14:00:00) in space  (linearNDFast)
57:41 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:41 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-22 15:00:00) in space  (linearNDFast)
57:41 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:41 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-22 14:00:00, weight 0.05) and
                      after (2024-06-22 15:00:00, weight 0.95) in time
57:41 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:41 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592349755 and -59.21575411632229 degrees.
57:41 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592349755 and -59.21575411632229 degrees.
57:41 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:41 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:41 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:41 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:41 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:41 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:41 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:41 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:41 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:41 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:41 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:41 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:41 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:41 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:41 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:41 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:41 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:41 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:41 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:41 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:41 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:41 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:41 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:41 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:41 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:41 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:41 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:41 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:41 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:41 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.19971 (min) 0.311265 (max)
57:41 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.203866 (min) 0.453724 (max)
57:41 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:41 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -4.06356 (min) -2.38602 (max)
57:41 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -1.18123 (min) -0.566047 (max)
57:41 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:41 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.29478 (min) 69.5236 (max)
57:41 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:41 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.838 (min) 15.3415 (max)
57:41 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 25.2459 (min) 33.0765 (max)
57:41 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: 2.90314e-06 (min) 0.000702145 (max)
57:41 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:41 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:41 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:41 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:41 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:41 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:41 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:41 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:41 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:41 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:41 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:41 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:41 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:41 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 10
57:41 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 0 2 2 2 2 0 2 2]
57:41 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 3 0 0 0 0 3 0 0]
57:41 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 463.   0.]
 [  0.   0.   0.   0.   0.]
 [103.   0.   0. 325.   0.]
 [ 10.   0. 680.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:41 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:41 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:41 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:41 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:41 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.012400295393221008
57:41 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:41 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:41 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:41 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:41 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:41 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:41 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:41 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:41 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:41 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:41 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:41 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:41 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:41 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:41 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:41 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:41 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:41 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:618: 18 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:41 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:41 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:41 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:41 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:636: 3 elements reached seafloor, interacting with bottom
57:41 DEBUG   opendrift.models.basemodel:759: Lifting 3 elements to seafloor.
57:41 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:41 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:41 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:41 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:41 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:41 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 15
57:41 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:41 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 15 elements
57:41 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:41 INFO    opendrift.models.chemicaldrift:1861: partitioning: [99, 0, 302, 99, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:41 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:41 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:41 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:41 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:41 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:41 INFO    opendrift.models.basemodel:2042: 2024-06-22 15:26:45.968543 - step 50 of 96 - 500 active elements (0 deactivated)
57:41 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:41 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:41 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.80221881029616
57:41 DEBUG   opendrift.models.basemodel:2066:               10.513855162050852 <- longitude -> 10.792964803495163
57:41 DEBUG   opendrift.models.basemodel:2071:               -27.09752803185927   <- z ->   -0.015529262721962811
57:41 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:41 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:41 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:41 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:41 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:41 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:41 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:41 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:41 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-22 15:00:00 (before)
                2024-06-22 16:00:00 (after)
57:43 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
57:43 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
57:43 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
57:43 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
57:43 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
57:43 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_salinity']
57:43 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 59x36x7) for time after (2024-06-22 16:00:00)
57:43 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-22 15:00:00) in space  (linearNDFast)
57:43 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:43 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-22 16:00:00) in space  (linearNDFast)
57:43 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:43 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:43 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:43 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:43 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:43 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:43 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:43 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:43 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:43 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:43 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:43 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:43 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:43 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:43 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:43 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:43 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:43 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:43 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:43 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:43 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:43 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:43 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:43 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:43 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
57:43 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
57:43 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
57:43 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
57:43 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
57:43 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
57:43 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
57:43 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:43 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:43 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:43 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:43 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:43 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:43 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:43 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-22 15:00:00, weight 0.55) and
                      after (2024-06-22 16:00:00, weight 0.45) in time
57:43 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:43 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592349755 and -59.20704619989455 degrees.
57:43 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592349755 and -59.20704619989455 degrees.
57:43 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:43 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:43 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:43 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:43 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:43 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:43 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:43 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:43 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:43 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:43 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:43 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:43 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:43 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:43 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:43 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:43 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:43 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:43 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:43 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:43 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:43 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:43 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:43 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:43 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:43 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:43 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:43 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:43 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:43 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.181267 (min) 0.33718 (max)
57:43 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.143789 (min) 0.489711 (max)
57:43 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:43 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -3.49776 (min) -1.92568 (max)
57:43 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -1.33564 (min) -0.820187 (max)
57:43 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:43 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.29478 (min) 73.6803 (max)
57:43 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:43 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.8442 (min) 15.3655 (max)
57:43 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 25.2516 (min) 33.1264 (max)
57:43 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -7.33297e-06 (min) 0.000611503 (max)
57:43 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:43 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:43 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:43 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:43 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:43 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:43 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:43 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:43 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:43 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:43 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:43 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:43 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:43 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 2
57:43 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0]
57:43 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3]
57:43 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 464.   0.]
 [  0.   0.   0.   0.   0.]
 [104.   0.   0. 341.   0.]
 [ 10.   0. 695.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:43 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:43 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:43 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:43 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:43 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.009616262089471696
57:43 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:43 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:43 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:43 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:43 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:43 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:618: 18 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:43 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:43 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:43 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:43 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:43 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:43 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:43 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:43 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:43 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:43 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:43 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:43 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:43 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:43 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:43 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:43 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:43 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:43 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:43 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:43 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:43 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:43 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:43 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:43 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:43 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:43 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:43 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:43 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:43 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:43 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:43 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:43 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 5
57:43 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:43 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 5 elements
57:43 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:43 INFO    opendrift.models.chemicaldrift:1861: partitioning: [99, 0, 287, 114, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:43 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:43 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:43 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:43 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:43 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:43 INFO    opendrift.models.basemodel:2042: 2024-06-22 15:56:45.968543 - step 51 of 96 - 500 active elements (0 deactivated)
57:43 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:43 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:43 DEBUG   opendrift.models.basemodel:2061:               57.55687017680575 <- latitude  -> 57.80832618757477
57:43 DEBUG   opendrift.models.basemodel:2066:               10.513855162050849 <- longitude -> 10.799363205858219
57:43 DEBUG   opendrift.models.basemodel:2071:               -30.69231841590475   <- z ->   0.0
57:43 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:43 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:43 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:43 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:43 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:43 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:43 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:43 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:43 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-22 15:00:00 (before)
                2024-06-22 16:00:00 (after)
57:43 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-22 15:00:00) in space  (linearNDFast)
57:43 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:43 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-22 16:00:00) in space  (linearNDFast)
57:43 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:43 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-22 15:00:00, weight 0.05) and
                      after (2024-06-22 16:00:00, weight 0.95) in time
57:43 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:43 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592349755 and -59.200647803095215 degrees.
57:43 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592349755 and -59.200647803095215 degrees.
57:43 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:43 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:43 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:43 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:43 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:43 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:43 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:43 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:43 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:43 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:43 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:43 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:43 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:43 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:43 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:43 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:43 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:43 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:43 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:43 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:43 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:43 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:43 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:43 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:43 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:43 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:43 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:43 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:43 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:43 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.168863 (min) 0.402656 (max)
57:43 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.106794 (min) 0.491059 (max)
57:43 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:43 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -2.89754 (min) -1.47619 (max)
57:43 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -1.49101 (min) -0.995849 (max)
57:43 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:43 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.29478 (min) 78.3198 (max)
57:43 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:43 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.8507 (min) 15.3581 (max)
57:43 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 25.4198 (min) 33.2073 (max)
57:43 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -1.71849e-05 (min) 0.000484603 (max)
57:43 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:43 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:43 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:43 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:43 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:43 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:43 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:43 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:43 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:43 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:43 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:43 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:43 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:43 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 6
57:43 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 2 3 2 2]
57:43 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 0 0 0 0]
57:43 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 465.   0.]
 [  0.   0.   0.   0.   0.]
 [108.   0.   0. 360.   0.]
 [ 11.   0. 700.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:43 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:43 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:43 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:43 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:43 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.00717553137201788
57:43 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:43 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:43 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:43 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:43 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:43 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:43 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:43 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:43 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:43 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:43 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:43 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:43 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:43 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:43 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:43 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:43 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:43 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:43 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:43 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:43 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:43 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:43 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:43 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:43 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:43 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:43 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:43 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:43 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:43 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:43 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:43 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:43 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:43 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 3
57:43 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:43 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 3 elements
57:43 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:43 INFO    opendrift.models.chemicaldrift:1861: partitioning: [103, 0, 269, 128, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:43 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:43 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:43 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:43 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:43 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:43 INFO    opendrift.models.basemodel:2042: 2024-06-22 16:26:45.968543 - step 52 of 96 - 500 active elements (0 deactivated)
57:43 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:43 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:43 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.81334223647993
57:43 DEBUG   opendrift.models.basemodel:2066:               10.513855162050849 <- longitude -> 10.795467882353156
57:43 DEBUG   opendrift.models.basemodel:2071:               -32.19866890523277   <- z ->   -0.22453630193706692
57:43 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:43 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:43 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:43 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:43 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:43 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:43 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:43 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:43 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-22 16:00:00 (before)
                2024-06-22 17:00:00 (after)
57:44 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
57:44 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
57:44 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
57:44 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
57:44 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
57:44 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_salinity']
57:44 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 61x36x7) for time after (2024-06-22 17:00:00)
57:44 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-22 16:00:00) in space  (linearNDFast)
57:44 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:44 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-22 17:00:00) in space  (linearNDFast)
57:44 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
57:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
57:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
57:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
57:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
57:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
57:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
57:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
57:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
57:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
57:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
57:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
57:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
57:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
57:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:44 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:44 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-22 16:00:00, weight 0.55) and
                      after (2024-06-22 17:00:00, weight 0.45) in time
57:44 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:44 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592349755 and -59.20454311075225 degrees.
57:44 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592349755 and -59.20454311075225 degrees.
57:44 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:44 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:44 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:44 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:44 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:44 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:44 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:44 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:44 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:44 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:44 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:44 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:44 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:44 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:44 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:44 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:44 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:44 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:44 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:44 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:44 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:44 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:44 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:44 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:44 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:44 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:44 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:44 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:44 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:44 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.188344 (min) 0.422129 (max)
57:44 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.0711527 (min) 0.536214 (max)
57:44 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:44 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -2.39175 (min) -1.09668 (max)
57:44 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -1.56948 (min) -1.13751 (max)
57:44 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:44 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.29478 (min) 81.6242 (max)
57:44 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:44 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.8558 (min) 15.3644 (max)
57:44 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 25.4564 (min) 33.207 (max)
57:44 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000152594 (min) 0.00052958 (max)
57:44 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:44 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:44 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:44 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:44 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:44 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:44 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:44 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:44 DEBUG   opendrift.models.basemodel:759: Lifting 3 elements to seafloor.
57:44 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:44 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:44 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:44 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:44 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 5
57:44 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 2 0 2]
57:44 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 0 3 0]
57:44 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 467.   0.]
 [  0.   0.   0.   0.   0.]
 [111.   0.   0. 377.   0.]
 [ 11.   0. 703.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:44 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:44 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:44 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:44 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:44 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.0052580974467850835
57:44 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:44 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:44 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:44 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:44 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:44 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:44 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:44 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:44 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:44 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:44 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:44 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:44 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:44 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:618: 1 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:44 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:44 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:44 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:44 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:44 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 3
57:44 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:44 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 3 elements
57:44 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:44 INFO    opendrift.models.chemicaldrift:1861: partitioning: [104, 0, 260, 136, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:44 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:44 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:44 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:44 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:44 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:44 INFO    opendrift.models.basemodel:2042: 2024-06-22 16:56:45.968543 - step 53 of 96 - 500 active elements (0 deactivated)
57:44 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:44 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:44 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.8146990846077
57:44 DEBUG   opendrift.models.basemodel:2066:               10.513855162050849 <- longitude -> 10.794618451161423
57:44 DEBUG   opendrift.models.basemodel:2071:               -30.386867202865826   <- z ->   -0.4385060819195511
57:44 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:44 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:44 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:44 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:44 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:44 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:44 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:44 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:44 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-22 16:00:00 (before)
                2024-06-22 17:00:00 (after)
57:44 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-22 16:00:00) in space  (linearNDFast)
57:44 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:44 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-22 17:00:00) in space  (linearNDFast)
57:44 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:44 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-22 16:00:00, weight 0.05) and
                      after (2024-06-22 17:00:00, weight 0.95) in time
57:44 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:44 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592349755 and -59.20539255581087 degrees.
57:44 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592349755 and -59.20539255581087 degrees.
57:44 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:44 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:44 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:44 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:44 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:44 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:44 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:44 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:44 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:44 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:44 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:44 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:44 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:44 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:44 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:44 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:44 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:44 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:44 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:44 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:44 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:44 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:44 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:44 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:44 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:44 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:44 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:44 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:44 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:44 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.205052 (min) 0.475734 (max)
57:44 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.0448867 (min) 0.503263 (max)
57:44 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:44 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -1.88039 (min) -0.570436 (max)
57:44 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -1.64545 (min) -1.15294 (max)
57:44 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:44 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.29478 (min) 82.4926 (max)
57:44 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:44 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.8608 (min) 15.3533 (max)
57:44 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 25.852 (min) 33.2033 (max)
57:44 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000332061 (min) 0.000551199 (max)
57:44 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:44 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:44 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:44 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:44 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:44 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:44 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:44 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:44 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:44 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:44 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:44 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:44 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:44 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 9
57:44 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 2 2 2 0 2 0 0]
57:44 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 0 0 0 3 0 3 3]
57:44 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 471.   0.]
 [  0.   0.   0.   0.   0.]
 [116.   0.   0. 386.   0.]
 [ 11.   0. 706.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:44 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:44 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:44 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:44 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:44 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.0036647467376078914
57:44 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:44 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:44 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:44 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:618: 1 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:44 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:44 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:618: 1 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:44 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:44 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:44 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:44 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
57:44 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
57:44 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 8
57:44 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:44 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 8 elements
57:44 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:44 INFO    opendrift.models.chemicaldrift:1861: partitioning: [105, 0, 260, 135, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:44 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:44 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:44 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:44 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:44 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:44 INFO    opendrift.models.basemodel:2042: 2024-06-22 17:26:45.968543 - step 54 of 96 - 500 active elements (0 deactivated)
57:44 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:44 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:44 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.81642236986027
57:44 DEBUG   opendrift.models.basemodel:2066:               10.513855162050849 <- longitude -> 10.794029118091338
57:44 DEBUG   opendrift.models.basemodel:2071:               -30.386336548024783   <- z ->   -0.22190221893826134
57:44 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:44 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:44 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:44 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:44 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:44 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:44 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:44 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:44 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-22 17:00:00 (before)
                2024-06-22 18:00:00 (after)
57:46 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
57:46 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
57:46 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
57:46 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
57:46 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
57:46 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_salinity']
57:46 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 61x36x7) for time after (2024-06-22 18:00:00)
57:46 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-22 17:00:00) in space  (linearNDFast)
57:46 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:46 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-22 18:00:00) in space  (linearNDFast)
57:46 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
57:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
57:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
57:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
57:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
57:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
57:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
57:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:46 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:46 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-22 17:00:00, weight 0.55) and
                      after (2024-06-22 18:00:00, weight 0.45) in time
57:46 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:46 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592349755 and -59.20598188319597 degrees.
57:46 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592349755 and -59.20598188319597 degrees.
57:46 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:46 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:46 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:46 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:46 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:46 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:46 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:46 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:46 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:46 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:46 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:46 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:46 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:46 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:46 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:46 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:46 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:46 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:46 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:46 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:46 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:46 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:46 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:46 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:46 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:46 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:46 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:46 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:46 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:46 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.219958 (min) 0.363034 (max)
57:46 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.0288535 (min) 0.66218 (max)
57:46 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:46 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -1.35295 (min) 0.265916 (max)
57:46 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -1.83259 (min) -1.31164 (max)
57:46 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:46 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.29478 (min) 83.5517 (max)
57:46 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:46 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.8658 (min) 15.3796 (max)
57:46 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 25.6909 (min) 33.2274 (max)
57:46 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000514788 (min) 0.00051986 (max)
57:46 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:46 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:46 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:46 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:46 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:46 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:46 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:46 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:46 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:46 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:46 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:46 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:46 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:46 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 8
57:46 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 0 0 0 2 0 2]
57:46 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 3 3 3 0 3 0]
57:46 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 475.   0.]
 [  0.   0.   0.   0.   0.]
 [120.   0.   0. 389.   0.]
 [ 11.   0. 714.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:46 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:46 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:46 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:46 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:46 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.0025802964968941575
57:46 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:46 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:46 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:46 DEBUG   opendrift.models.oceandrift:618: 1 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:46 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:46 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:46 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:46 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:46 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:46 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:46 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:46 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:46 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:46 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:46 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:46 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:46 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:46 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:46 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:46 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:46 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:46 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:46 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:46 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:46 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 28
57:46 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:46 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 28 elements
57:46 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:46 INFO    opendrift.models.chemicaldrift:1861: partitioning: [105, 0, 270, 125, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:46 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:46 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:46 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:46 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:46 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:46 INFO    opendrift.models.basemodel:2042: 2024-06-22 17:56:45.968543 - step 55 of 96 - 500 active elements (0 deactivated)
57:46 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:46 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:46 DEBUG   opendrift.models.basemodel:2061:               57.55687017680575 <- latitude  -> 57.81869622772496
57:46 DEBUG   opendrift.models.basemodel:2066:               10.513855162050849 <- longitude -> 10.790109333938652
57:46 DEBUG   opendrift.models.basemodel:2071:               -29.989434882821744   <- z ->   -0.2919112300595427
57:46 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:46 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:46 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:46 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:46 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:46 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:46 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:46 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:46 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-22 17:00:00 (before)
                2024-06-22 18:00:00 (after)
57:46 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-22 17:00:00) in space  (linearNDFast)
57:46 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:46 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-22 18:00:00) in space  (linearNDFast)
57:46 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:46 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-22 17:00:00, weight 0.05) and
                      after (2024-06-22 18:00:00, weight 0.95) in time
57:46 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:46 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592349756 and -59.209901670628184 degrees.
57:46 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592349756 and -59.209901670628184 degrees.
57:46 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:46 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:46 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:46 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:46 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:46 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:46 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:46 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:46 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:46 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:46 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:46 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:46 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:46 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:46 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:46 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:46 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:46 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:46 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:46 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:46 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:46 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:46 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:46 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:46 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:46 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:46 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:46 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:46 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:46 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.239596 (min) 0.374301 (max)
57:46 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.013789 (min) 0.621967 (max)
57:46 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:46 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: -0.837705 (min) 1.12513 (max)
57:46 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -2.15764 (min) -1.39307 (max)
57:46 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:46 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.29478 (min) 84.7029 (max)
57:46 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:46 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.8708 (min) 15.3776 (max)
57:46 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 25.5488 (min) 33.2396 (max)
57:46 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000595288 (min) 0.000485936 (max)
57:46 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:46 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:46 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:46 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:46 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:46 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:46 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:46 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:46 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:46 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:46 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:46 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:46 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:46 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 3
57:46 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0]
57:46 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3]
57:46 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 478.   0.]
 [  0.   0.   0.   0.   0.]
 [120.   0.   0. 403.   0.]
 [ 11.   0. 742.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:46 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:46 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:46 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:46 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:46 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.0039577526587296664
57:46 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:46 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:46 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:46 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:46 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:46 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:46 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:46 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:46 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:46 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:46 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:46 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:46 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:46 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:46 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:46 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:46 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:46 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:46 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:46 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:46 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:46 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:46 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:46 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:46 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:46 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:46 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:46 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:46 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:46 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:46 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:46 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:46 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:46 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:46 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:46 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:46 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:46 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 33
57:46 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:46 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 33 elements
57:46 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:46 INFO    opendrift.models.chemicaldrift:1861: partitioning: [102, 0, 285, 113, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:46 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:46 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:46 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:46 DEBUG   opendrift.models.basemodel:759: Lifting 3 elements to seafloor.
57:46 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:46 INFO    opendrift.models.basemodel:2042: 2024-06-22 18:26:45.968543 - step 56 of 96 - 500 active elements (0 deactivated)
57:46 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:46 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:46 DEBUG   opendrift.models.basemodel:2061:               57.55687017680575 <- latitude  -> 57.82104843591202
57:46 DEBUG   opendrift.models.basemodel:2066:               10.513855162050849 <- longitude -> 10.789617975015949
57:46 DEBUG   opendrift.models.basemodel:2071:               -30.148919792129714   <- z ->   -0.3457547299827771
57:46 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:46 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:46 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:46 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:46 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:46 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:46 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:46 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:46 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-22 18:00:00 (before)
                2024-06-22 19:00:00 (after)
57:47 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
57:47 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
57:47 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
57:47 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
57:47 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
57:47 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_salinity']
57:47 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 62x36x7) for time after (2024-06-22 19:00:00)
57:47 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-22 18:00:00) in space  (linearNDFast)
57:47 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:47 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-22 19:00:00) in space  (linearNDFast)
57:47 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:47 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:47 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:47 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:47 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:47 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:47 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:47 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:47 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:47 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:47 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:47 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:47 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:47 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:47 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:47 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:47 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:47 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 7 elements, expanding data 1
57:47 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 7 elements, expanding data 1
57:47 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 7 elements, expanding data 1
57:47 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 7 elements, expanding data 1
57:47 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 7 elements, expanding data 1
57:47 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 7 elements, expanding data 1
57:47 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 7 elements, expanding data 1
57:47 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 11 elements, expanding data 1
57:47 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 11 elements, expanding data 1
57:47 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 11 elements, expanding data 1
57:47 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 11 elements, expanding data 1
57:47 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 11 elements, expanding data 1
57:47 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 11 elements, expanding data 1
57:47 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 11 elements, expanding data 1
57:47 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:47 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:47 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:47 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:47 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:47 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:47 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:47 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-22 18:00:00, weight 0.55) and
                      after (2024-06-22 19:00:00, weight 0.45) in time
57:47 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:47 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592349756 and -59.21039303134529 degrees.
57:47 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592349756 and -59.21039303134529 degrees.
57:47 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:47 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:47 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:47 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:47 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:47 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:47 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:47 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:47 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:47 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:47 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:47 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:47 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:47 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:47 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:47 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:47 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:47 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:47 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:47 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:47 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:47 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:47 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:47 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:47 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:47 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:47 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:47 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:47 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:47 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.250718 (min) 0.404199 (max)
57:47 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: 0.0216407 (min) 0.638872 (max)
57:47 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:47 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: 0.00370717 (min) 1.95353 (max)
57:47 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -2.59064 (min) -1.59197 (max)
57:47 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 1 (max)
57:47 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.29478 (min) 85.8651 (max)
57:47 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:47 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.8758 (min) 15.3601 (max)
57:47 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 25.4871 (min) 33.2427 (max)
57:47 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000562572 (min) 0.00118978 (max)
57:47 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:47 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:47 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:47 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:47 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:47 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:47 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:47 DEBUG   opendrift.models.basemodel:717: 1 elements hit coastline, moving back to water
57:47 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:47 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:47 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:47 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:47 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:47 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 4
57:47 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 0 0]
57:47 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 3 3]
57:47 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 481.   0.]
 [  0.   0.   0.   0.   0.]
 [121.   0.   0. 421.   0.]
 [ 11.   0. 775.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:47 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:47 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:47 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:47 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:47 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.007423677532775364
57:47 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:47 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:47 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:47 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:47 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:47 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:47 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:47 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:47 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:47 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:47 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:47 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:47 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:47 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:47 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:47 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:47 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:47 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:47 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:47 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:47 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:47 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:47 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:47 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:47 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:47 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:47 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:47 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:47 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:47 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:47 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:47 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:47 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:47 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:47 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:47 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:47 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:47 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:47 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:47 DEBUG   opendrift.models.oceandrift:618: 1 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:47 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:47 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 39
57:47 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:47 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 39 elements
57:47 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:47 INFO    opendrift.models.chemicaldrift:1861: partitioning: [100, 0, 302, 98, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:47 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:47 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:47 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:47 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:47 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:47 INFO    opendrift.models.basemodel:2042: 2024-06-22 18:56:45.968543 - step 57 of 96 - 500 active elements (0 deactivated)
57:47 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:47 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:47 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.82335126097763
57:47 DEBUG   opendrift.models.basemodel:2066:               10.513855162050849 <- longitude -> 10.800264890215098
57:47 DEBUG   opendrift.models.basemodel:2071:               -31.591236754589346   <- z ->   -0.14427381145740198
57:47 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:47 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:47 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:47 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:47 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:47 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:47 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:47 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:47 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-22 18:00:00 (before)
                2024-06-22 19:00:00 (after)
57:47 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-22 18:00:00) in space  (linearNDFast)
57:47 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:47 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-22 19:00:00) in space  (linearNDFast)
57:47 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:47 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-22 18:00:00, weight 0.05) and
                      after (2024-06-22 19:00:00, weight 0.95) in time
57:47 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:47 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592349756 and -59.1997461079111 degrees.
57:47 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592349756 and -59.1997461079111 degrees.
57:47 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:47 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:47 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:47 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:47 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:47 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:47 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:47 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:47 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:47 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:47 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:47 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:47 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:47 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:47 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:47 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:47 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:47 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:47 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:47 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:47 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:47 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:47 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:47 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:47 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:47 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:47 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:47 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:47 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:47 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.263602 (min) 0.490338 (max)
57:47 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: 0.0430812 (min) 0.574531 (max)
57:47 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:47 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: 0.857582 (min) 2.96126 (max)
57:47 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -3.03395 (min) -1.78475 (max)
57:47 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 1 (max)
57:47 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.29478 (min) 86.8984 (max)
57:47 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:47 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.8802 (min) 15.372 (max)
57:47 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 25.7016 (min) 33.2529 (max)
57:47 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000687268 (min) 0.00124955 (max)
57:47 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:47 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:47 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:47 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:47 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:47 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:47 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:47 DEBUG   opendrift.models.basemodel:717: 1 elements hit coastline, moving back to water
57:47 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:47 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:47 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:47 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:47 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:47 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 7
57:47 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 2 0 2 2 0]
57:47 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 0 3 0 0 3]
57:47 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 483.   0.]
 [  0.   0.   0.   0.   0.]
 [126.   0.   0. 442.   0.]
 [ 11.   0. 814.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:47 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:47 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:47 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:47 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:47 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.012902941655924788
57:47 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:47 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:47 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:47 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:47 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:47 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:47 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:47 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:47 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:47 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:47 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:47 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:47 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:47 DEBUG   opendrift.models.oceandrift:618: 18 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:47 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:47 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:47 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:47 DEBUG   opendrift.models.oceandrift:618: 19 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:47 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:47 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:636: 3 elements reached seafloor, interacting with bottom
57:47 DEBUG   opendrift.models.basemodel:759: Lifting 3 elements to seafloor.
57:47 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:636: 3 elements reached seafloor, interacting with bottom
57:47 DEBUG   opendrift.models.basemodel:759: Lifting 3 elements to seafloor.
57:47 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:47 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:47 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:47 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:47 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 31
57:47 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:47 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 31 elements
57:47 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:47 INFO    opendrift.models.chemicaldrift:1861: partitioning: [103, 0, 311, 86, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:47 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:47 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:47 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:47 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:47 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:47 INFO    opendrift.models.basemodel:2042: 2024-06-22 19:26:45.968543 - step 58 of 96 - 500 active elements (0 deactivated)
57:47 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:47 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:47 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.82504758970203
57:47 DEBUG   opendrift.models.basemodel:2066:               10.513855162050849 <- longitude -> 10.812269489023318
57:47 DEBUG   opendrift.models.basemodel:2071:               -33.12461490853805   <- z ->   -0.1568775185375838
57:47 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:47 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:47 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:47 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:47 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:47 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:47 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:47 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:47 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-22 19:00:00 (before)
                2024-06-22 20:00:00 (after)
57:49 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
57:49 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
57:49 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
57:49 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
57:49 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
57:49 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_salinity']
57:49 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 63x37x7) for time after (2024-06-22 20:00:00)
57:49 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-22 19:00:00) in space  (linearNDFast)
57:49 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:49 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-22 20:00:00) in space  (linearNDFast)
57:49 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:49 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
57:49 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
57:49 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
57:49 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
57:49 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
57:49 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
57:49 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
57:49 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
57:49 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
57:49 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
57:49 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
57:49 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
57:49 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
57:49 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
57:49 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
57:49 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
57:49 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 7 elements, expanding data 1
57:49 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 7 elements, expanding data 1
57:49 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 7 elements, expanding data 1
57:49 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 7 elements, expanding data 1
57:49 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 7 elements, expanding data 1
57:49 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 7 elements, expanding data 1
57:49 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 7 elements, expanding data 1
57:49 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
57:49 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
57:49 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
57:49 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
57:49 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
57:49 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
57:49 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 10 elements, expanding data 1
57:49 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
57:49 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
57:49 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
57:49 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
57:49 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
57:49 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
57:49 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
57:49 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-22 19:00:00, weight 0.55) and
                      after (2024-06-22 20:00:00, weight 0.45) in time
57:49 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:49 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.486155918197845 and -59.187741508986946 degrees.
57:49 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.486155918197845 and -59.187741508986946 degrees.
57:49 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:49 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:49 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:49 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:49 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:49 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:49 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:49 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:49 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:49 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:49 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:49 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:49 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:49 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:49 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:49 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:49 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:49 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:49 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:49 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:49 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:49 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:49 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:49 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:49 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:49 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:49 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:49 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:49 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:49 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.265085 (min) 0.470575 (max)
57:49 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.00211119 (min) 0.631002 (max)
57:49 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:49 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: 1.06215 (min) 3.03091 (max)
57:49 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -3.36937 (min) -2.22616 (max)
57:49 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 1 (max)
57:49 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.52273 (min) 87.7862 (max)
57:49 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:49 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.7653 (min) 15.3484 (max)
57:49 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 25.9352 (min) 33.2809 (max)
57:49 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000814494 (min) 0.000856355 (max)
57:49 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:49 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:49 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:49 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:49 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:49 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:49 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:49 DEBUG   opendrift.models.basemodel:717: 1 elements hit coastline, moving back to water
57:49 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:49 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:49 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:49 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:49 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:49 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 9
57:49 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 2 0 2 2 0 2 2]
57:49 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 0 3 0 0 3 0 0]
57:49 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 485.   0.]
 [  0.   0.   0.   0.   0.]
 [133.   0.   0. 459.   0.]
 [ 11.   0. 845.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:49 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:49 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:49 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:49 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:49 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.014845845185392274
57:49 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:49 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:49 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:49 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:49 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:49 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:49 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:49 DEBUG   opendrift.models.oceandrift:618: 18 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:49 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:49 DEBUG   opendrift.models.oceandrift:618: 19 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:618: 18 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:49 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:49 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:49 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:49 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:636: 3 elements reached seafloor, interacting with bottom
57:49 DEBUG   opendrift.models.basemodel:759: Lifting 3 elements to seafloor.
57:49 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:618: 18 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:49 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:49 DEBUG   opendrift.models.oceandrift:618: 19 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:49 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:49 DEBUG   opendrift.models.oceandrift:618: 18 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:49 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:49 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:618: 18 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:49 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:49 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:49 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:49 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:49 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 20
57:49 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:49 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 20 elements
57:49 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:49 INFO    opendrift.models.chemicaldrift:1861: partitioning: [108, 0, 309, 83, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:49 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:49 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:49 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:49 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:49 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:49 INFO    opendrift.models.basemodel:2042: 2024-06-22 19:56:45.968543 - step 59 of 96 - 500 active elements (0 deactivated)
57:49 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:49 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:49 DEBUG   opendrift.models.basemodel:2061:               57.55687017680575 <- latitude  -> 57.82708203830919
57:49 DEBUG   opendrift.models.basemodel:2066:               10.513855162050849 <- longitude -> 10.822293323930364
57:49 DEBUG   opendrift.models.basemodel:2071:               -32.579588093392466   <- z ->   -0.11347001630759779
57:49 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:49 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:49 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:49 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:49 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:49 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:49 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:49 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:49 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-22 19:00:00 (before)
                2024-06-22 20:00:00 (after)
57:49 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-22 19:00:00) in space  (linearNDFast)
57:49 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:49 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-22 20:00:00) in space  (linearNDFast)
57:49 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:49 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-22 19:00:00, weight 0.05) and
                      after (2024-06-22 20:00:00, weight 0.95) in time
57:49 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:49 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.486155918197845 and -59.17771766311819 degrees.
57:49 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.486155918197845 and -59.17771766311819 degrees.
57:49 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:49 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:49 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:49 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:49 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:49 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:49 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:49 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:49 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:49 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:49 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:49 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:49 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:49 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:49 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:49 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:49 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:49 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:49 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:49 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:49 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:49 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:49 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:49 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:49 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:49 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:49 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:49 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:49 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:49 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.252997 (min) 0.433616 (max)
57:49 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.100652 (min) 0.585456 (max)
57:49 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:49 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: 1.18503 (min) 2.98582 (max)
57:49 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -3.70039 (min) -2.51767 (max)
57:49 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 1 (max)
57:49 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.74627 (min) 89.1545 (max)
57:49 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:49 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.5333 (min) 15.3119 (max)
57:49 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 26.1402 (min) 33.3054 (max)
57:49 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000711296 (min) 0.000855258 (max)
57:49 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:49 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:49 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:49 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:49 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:49 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:49 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:49 DEBUG   opendrift.models.basemodel:717: 1 elements hit coastline, moving back to water
57:49 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:49 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:49 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:49 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:49 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:49 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 8
57:49 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 2 0 2 0 2 0]
57:49 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 0 3 0 3 0 3]
57:49 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 489.   0.]
 [  0.   0.   0.   0.   0.]
 [137.   0.   0. 474.   0.]
 [ 11.   0. 865.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:49 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:49 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:49 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:49 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:49 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.01632175477892093
57:49 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:49 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:49 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:49 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:49 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:49 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:49 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:49 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:49 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:49 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:49 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:49 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:49 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:49 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:49 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:49 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:49 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:49 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:49 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:49 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:49 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:49 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:49 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:49 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:49 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:49 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 15
57:49 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:49 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 15 elements
57:49 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:49 INFO    opendrift.models.chemicaldrift:1861: partitioning: [108, 0, 309, 83, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:49 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:49 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:49 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:49 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:49 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:49 INFO    opendrift.models.basemodel:2042: 2024-06-22 20:26:45.968543 - step 60 of 96 - 500 active elements (0 deactivated)
57:49 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:49 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:49 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.82855734347092
57:49 DEBUG   opendrift.models.basemodel:2066:               10.513855162050849 <- longitude -> 10.83254292386697
57:49 DEBUG   opendrift.models.basemodel:2071:               -31.788459690666336   <- z ->   -0.056590017171670615
57:49 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:49 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:49 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:49 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:49 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:49 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:49 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:49 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:49 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-22 20:00:00 (before)
                2024-06-22 21:00:00 (after)
57:50 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
57:50 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
57:50 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
57:50 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
57:50 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
57:50 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_salinity']
57:50 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 64x38x7) for time after (2024-06-22 21:00:00)
57:50 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-22 20:00:00) in space  (linearNDFast)
57:50 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:50 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-22 21:00:00) in space  (linearNDFast)
57:50 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:50 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
57:50 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
57:50 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
57:50 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
57:50 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
57:50 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
57:50 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
57:50 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
57:50 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
57:50 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
57:50 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
57:50 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
57:50 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
57:50 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
57:50 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
57:50 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
57:50 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
57:50 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
57:50 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
57:50 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
57:50 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
57:50 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
57:50 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 5 elements, expanding data 1
57:50 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
57:50 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
57:50 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
57:50 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
57:50 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
57:50 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
57:50 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 8 elements, expanding data 1
57:50 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
57:50 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
57:50 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
57:50 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
57:50 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
57:50 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
57:50 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
57:50 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-22 20:00:00, weight 0.55) and
                      after (2024-06-22 21:00:00, weight 0.45) in time
57:50 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:50 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.486155918197845 and -59.16746806816238 degrees.
57:50 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.486155918197845 and -59.16746806816238 degrees.
57:50 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:50 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:50 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:50 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:50 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:50 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:50 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:50 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:50 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:50 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:50 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:50 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:50 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:50 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:50 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:50 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:50 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:50 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:50 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:50 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:50 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:50 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:50 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:50 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:50 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:50 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:50 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:50 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:50 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:50 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.276144 (min) 0.388027 (max)
57:50 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.0835229 (min) 0.542937 (max)
57:50 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:50 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: 1.39998 (min) 3.231 (max)
57:50 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -3.68206 (min) -2.4317 (max)
57:50 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 1 (max)
57:50 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 8.96471 (min) 92.3122 (max)
57:50 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:50 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.4968 (min) 15.312 (max)
57:50 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 25.7636 (min) 33.34 (max)
57:50 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000813074 (min) 0.00108742 (max)
57:50 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:50 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:50 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:50 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:50 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:50 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:50 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:50 DEBUG   opendrift.models.basemodel:717: 1 elements hit coastline, moving back to water
57:50 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:50 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:50 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:50 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:50 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:50 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 5
57:50 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 2 2 2]
57:50 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 0 0 0]
57:50 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 490.   0.]
 [  0.   0.   0.   0.   0.]
 [141.   0.   0. 485.   0.]
 [ 11.   0. 880.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:50 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:50 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:50 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:50 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:50 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.017344563670050554
57:50 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:50 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:50 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:50 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:50 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:50 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:50 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:50 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:50 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:50 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:50 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:50 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:50 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:50 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:50 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:50 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:50 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:50 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:50 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:50 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:50 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:50 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:50 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:50 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:50 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:50 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:50 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:50 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:50 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:50 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:50 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:50 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:50 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:50 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:50 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:50 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:50 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:50 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:50 DEBUG   opendrift.models.oceandrift:618: 18 elements penetrated seafloor, lifting up
57:50 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:50 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:50 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:50 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:50 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:50 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:50 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:50 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:50 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:50 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:50 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:50 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:50 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:50 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:50 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:50 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:50 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:50 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:50 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:50 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:50 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 19
57:50 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:50 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 19 elements
57:50 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:50 INFO    opendrift.models.chemicaldrift:1861: partitioning: [111, 0, 308, 81, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:50 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:50 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:50 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:50 DEBUG   opendrift.models.basemodel:759: Lifting 3 elements to seafloor.
57:50 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:50 INFO    opendrift.models.basemodel:2042: 2024-06-22 20:56:45.968543 - step 61 of 96 - 500 active elements (0 deactivated)
57:50 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:50 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:50 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.82973350277634
57:50 DEBUG   opendrift.models.basemodel:2066:               10.513855162050849 <- longitude -> 10.838179375479367
57:50 DEBUG   opendrift.models.basemodel:2071:               -32.75720944139224   <- z ->   -0.14105804391630894
57:50 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:50 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:50 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:50 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:50 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:50 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:50 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:50 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:50 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-22 20:00:00 (before)
                2024-06-22 21:00:00 (after)
57:50 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-22 20:00:00) in space  (linearNDFast)
57:50 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:50 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-22 21:00:00) in space  (linearNDFast)
57:50 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:50 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-22 20:00:00, weight 0.05) and
                      after (2024-06-22 21:00:00, weight 0.95) in time
57:50 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:50 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.486155918197845 and -59.16183161884392 degrees.
57:50 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.486155918197845 and -59.16183161884392 degrees.
57:50 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:50 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:50 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:50 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:50 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:50 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:50 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:50 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:50 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:50 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:50 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:50 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:50 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:50 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:50 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:50 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:50 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:50 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:50 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:50 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:50 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:50 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:50 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:50 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:50 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:50 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:50 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:50 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:50 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:50 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.261512 (min) 0.390913 (max)
57:50 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.0548438 (min) 0.511986 (max)
57:50 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:50 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: 1.65064 (min) 3.51105 (max)
57:50 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -3.65078 (min) -2.33812 (max)
57:50 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 1 (max)
57:50 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.17205 (min) 95.3861 (max)
57:50 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:50 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.8038 (min) 15.2795 (max)
57:50 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 26.1453 (min) 33.2454 (max)
57:50 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000917555 (min) 0.00123143 (max)
57:50 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:50 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:50 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:50 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:50 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:50 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:50 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:50 DEBUG   opendrift.models.basemodel:717: 1 elements hit coastline, moving back to water
57:50 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:50 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:50 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:50 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:50 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:50 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 7
57:50 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 2 2 3 0 2]
57:50 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 0 0 0 3 0]
57:50 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 493.   0.]
 [  0.   0.   0.   0.   0.]
 [144.   0.   0. 501.   0.]
 [ 12.   0. 899.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:50 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:50 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:50 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:50 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:50 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.01853940293722008
57:50 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:50 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:50 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:51 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:51 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:51 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:51 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:51 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:51 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:51 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:51 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:51 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:51 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:51 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:51 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:51 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:51 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:51 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:51 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:51 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:51 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:51 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:51 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:51 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:51 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:51 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:51 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:51 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:51 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:51 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:51 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:51 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:51 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:51 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:51 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:51 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:51 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:51 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:51 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:51 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:51 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:51 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:51 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:51 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:51 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:51 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:51 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:51 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:51 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:51 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 14
57:51 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:51 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 14 elements
57:51 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:51 INFO    opendrift.models.chemicaldrift:1861: partitioning: [112, 0, 310, 78, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:51 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:51 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:51 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:51 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:51 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:51 INFO    opendrift.models.basemodel:2042: 2024-06-22 21:26:45.968543 - step 62 of 96 - 500 active elements (0 deactivated)
57:51 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:51 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:51 DEBUG   opendrift.models.basemodel:2061:               57.55687017680575 <- latitude  -> 57.83127857047875
57:51 DEBUG   opendrift.models.basemodel:2066:               10.513855162050849 <- longitude -> 10.846250704454004
57:51 DEBUG   opendrift.models.basemodel:2071:               -36.07952373904136   <- z ->   -0.2715105832492245
57:51 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:51 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:51 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:51 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:51 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:51 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:51 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:51 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:51 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-22 21:00:00 (before)
                2024-06-22 22:00:00 (after)
57:52 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
57:52 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
57:52 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
57:52 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
57:52 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
57:52 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_salinity']
57:52 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 64x39x7) for time after (2024-06-22 22:00:00)
57:52 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-22 21:00:00) in space  (linearNDFast)
57:52 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:52 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-22 22:00:00) in space  (linearNDFast)
57:52 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:52 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:52 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:52 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:52 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:52 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:52 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:52 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:52 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:52 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:52 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:52 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:52 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:52 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:52 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:52 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:52 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:52 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
57:52 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
57:52 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
57:52 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
57:52 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
57:52 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
57:52 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
57:52 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
57:52 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
57:52 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
57:52 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
57:52 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
57:52 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
57:52 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
57:52 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:52 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:52 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:52 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:52 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:52 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:52 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:52 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-22 21:00:00, weight 0.55) and
                      after (2024-06-22 22:00:00, weight 0.45) in time
57:52 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:52 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.486155918197845 and -59.15376027828419 degrees.
57:52 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.486155918197845 and -59.15376027828419 degrees.
57:52 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:52 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:52 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:52 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:52 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:52 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:52 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:52 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:52 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:52 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:52 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:52 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:52 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:52 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:52 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:52 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:52 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:52 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:52 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:52 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:52 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:52 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:52 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:52 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:52 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:52 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:52 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:52 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:52 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:52 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.245367 (min) 0.356056 (max)
57:52 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.0595346 (min) 0.474675 (max)
57:52 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:52 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: 1.99025 (min) 3.87553 (max)
57:52 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -3.58606 (min) -2.5503 (max)
57:52 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 1 (max)
57:52 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.3695 (min) 98.5648 (max)
57:52 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:52 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.6693 (min) 15.2449 (max)
57:52 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 26.2944 (min) 33.2603 (max)
57:52 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.00072912 (min) 0.00118279 (max)
57:52 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:52 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:52 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:52 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:52 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:52 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:52 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:52 DEBUG   opendrift.models.basemodel:717: 1 elements hit coastline, moving back to water
57:52 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:52 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:52 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:52 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:52 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:52 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 8
57:52 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 3 0 2 2 2 2 2]
57:52 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 3 0 0 0 0 0]
57:52 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 495.   0.]
 [  0.   0.   0.   0.   0.]
 [149.   0.   0. 510.   0.]
 [ 13.   0. 913.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:52 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:52 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:52 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:52 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:52 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.019751827414036204
57:52 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:52 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:52 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:52 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:52 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:52 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:52 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:52 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:52 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:52 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:52 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:52 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:52 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:52 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:52 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:52 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:52 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:52 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:52 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:52 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:52 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:52 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:52 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:52 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:52 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:52 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:52 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:52 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:52 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 13
57:52 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:52 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 13 elements
57:52 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:52 INFO    opendrift.models.chemicaldrift:1861: partitioning: [116, 0, 305, 79, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:52 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:52 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:52 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:52 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:52 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:52 INFO    opendrift.models.basemodel:2042: 2024-06-22 21:56:45.968543 - step 63 of 96 - 500 active elements (0 deactivated)
57:52 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:52 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:52 DEBUG   opendrift.models.basemodel:2061:               57.55687017680575 <- latitude  -> 57.83589448397041
57:52 DEBUG   opendrift.models.basemodel:2066:               10.513855162050849 <- longitude -> 10.856429042057876
57:52 DEBUG   opendrift.models.basemodel:2071:               -33.637545313222326   <- z ->   0.0
57:52 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:52 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:52 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:52 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:52 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:52 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:52 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:52 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:52 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-22 21:00:00 (before)
                2024-06-22 22:00:00 (after)
57:52 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-22 21:00:00) in space  (linearNDFast)
57:52 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:52 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-22 22:00:00) in space  (linearNDFast)
57:52 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:52 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-22 21:00:00, weight 0.05) and
                      after (2024-06-22 22:00:00, weight 0.95) in time
57:52 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:52 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592879734 and -59.143581951570596 degrees.
57:52 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592879734 and -59.143581951570596 degrees.
57:52 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:52 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:52 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:52 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:52 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:52 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:52 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:52 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:52 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:52 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:52 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:52 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:52 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:52 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:52 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:52 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:52 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:52 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:52 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:52 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:52 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:52 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:52 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:52 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:52 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:52 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:52 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:52 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:52 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:52 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.23988 (min) 0.397362 (max)
57:52 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.0843004 (min) 0.437925 (max)
57:52 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:52 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: 2.3057 (min) 4.24994 (max)
57:52 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -3.76064 (min) -2.79639 (max)
57:52 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 1 (max)
57:52 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.53831 (min) 101.608 (max)
57:52 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:52 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.375 (min) 15.2265 (max)
57:52 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 26.5533 (min) 33.2956 (max)
57:52 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000700971 (min) 0.0011327 (max)
57:52 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:52 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:52 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:52 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:52 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:52 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:52 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:52 DEBUG   opendrift.models.basemodel:717: 1 elements hit coastline, moving back to water
57:52 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:52 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:52 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:52 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:52 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:52 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 2
57:52 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2]
57:52 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0]
57:52 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 495.   0.]
 [  0.   0.   0.   0.   0.]
 [151.   0.   0. 523.   0.]
 [ 13.   0. 926.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:52 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:52 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:52 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:52 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:52 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.021190803124666258
57:52 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:52 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:52 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:52 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:618: 18 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:52 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:52 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:52 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:52 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:52 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:52 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:52 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:52 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:52 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:52 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:52 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:52 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:52 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:52 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 6
57:52 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:52 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 6 elements
57:52 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:52 INFO    opendrift.models.chemicaldrift:1861: partitioning: [118, 0, 302, 80, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:52 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:52 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:52 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:52 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:52 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:52 INFO    opendrift.models.basemodel:2042: 2024-06-22 22:26:45.968543 - step 64 of 96 - 500 active elements (0 deactivated)
57:52 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:52 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:52 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.84067985320776
57:52 DEBUG   opendrift.models.basemodel:2066:               10.513855162050849 <- longitude -> 10.865145824997416
57:52 DEBUG   opendrift.models.basemodel:2071:               -34.51312379333186   <- z ->   0.0
57:52 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:52 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:52 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:52 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:52 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:52 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:52 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:52 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:52 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-22 22:00:00 (before)
                2024-06-22 23:00:00 (after)
57:54 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
57:54 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
57:54 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
57:54 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
57:54 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
57:54 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_salinity']
57:54 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 64x39x7) for time after (2024-06-22 23:00:00)
57:54 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-22 22:00:00) in space  (linearNDFast)
57:54 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:54 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-22 23:00:00) in space  (linearNDFast)
57:54 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:54 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:54 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:54 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:54 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:54 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:54 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:54 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:54 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:54 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:54 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:54 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:54 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:54 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:54 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:54 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:54 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:54 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:54 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:54 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:54 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:54 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:54 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:54 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:54 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
57:54 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
57:54 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
57:54 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
57:54 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
57:54 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
57:54 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
57:54 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:54 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:54 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:54 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:54 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:54 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:54 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:54 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-22 22:00:00, weight 0.55) and
                      after (2024-06-22 23:00:00, weight 0.45) in time
57:54 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:54 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592879734 and -59.13486516172181 degrees.
57:54 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592879734 and -59.13486516172181 degrees.
57:54 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:54 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:54 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:54 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:54 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:54 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:54 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:54 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:54 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:54 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:54 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:54 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:54 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:54 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:54 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:54 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:54 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:54 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:54 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:54 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:54 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:54 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:54 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:54 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:54 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:54 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:54 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:54 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:54 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:54 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.222086 (min) 0.327795 (max)
57:54 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.0947437 (min) 0.441029 (max)
57:54 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:54 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: 2.31247 (min) 4.26169 (max)
57:54 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -3.82935 (min) -2.87247 (max)
57:54 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:54 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.68019 (min) 104.439 (max)
57:54 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:54 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.0524 (min) 15.2094 (max)
57:54 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 26.3554 (min) 33.4093 (max)
57:54 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000751111 (min) 0.00103893 (max)
57:54 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:54 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:54 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:54 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:54 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:54 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:54 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:54 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:54 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:54 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:54 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:54 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:54 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:54 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 5
57:54 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 2 2 2]
57:54 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 0 0 0]
57:54 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 495.   0.]
 [  0.   0.   0.   0.   0.]
 [156.   0.   0. 530.   0.]
 [ 13.   0. 932.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:54 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:54 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:54 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:54 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:54 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.022038391871252533
57:54 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:54 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:54 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:54 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:54 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:54 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:54 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:54 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:54 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:54 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:54 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:54 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:54 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:54 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:54 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:54 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:54 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 6
57:54 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:54 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 6 elements
57:54 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:54 INFO    opendrift.models.chemicaldrift:1861: partitioning: [123, 0, 296, 81, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:54 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:54 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:54 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:54 DEBUG   opendrift.models.basemodel:759: Lifting 3 elements to seafloor.
57:54 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:54 INFO    opendrift.models.basemodel:2042: 2024-06-22 22:56:45.968543 - step 65 of 96 - 500 active elements (0 deactivated)
57:54 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:54 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:54 DEBUG   opendrift.models.basemodel:2061:               57.55687017680575 <- latitude  -> 57.84466091155093
57:54 DEBUG   opendrift.models.basemodel:2066:               10.513855162050849 <- longitude -> 10.869486878956739
57:54 DEBUG   opendrift.models.basemodel:2071:               -32.856423257747146   <- z ->   0.0
57:54 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:54 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:54 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:54 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:54 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:54 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:54 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:54 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:54 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-22 22:00:00 (before)
                2024-06-22 23:00:00 (after)
57:54 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-22 22:00:00) in space  (linearNDFast)
57:54 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:54 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-22 23:00:00) in space  (linearNDFast)
57:54 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:54 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-22 22:00:00, weight 0.05) and
                      after (2024-06-22 23:00:00, weight 0.95) in time
57:54 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:54 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592879734 and -59.13052410137565 degrees.
57:54 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592879734 and -59.13052410137565 degrees.
57:54 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:54 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:54 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:54 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:54 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:54 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:54 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:54 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:54 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:54 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:54 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:54 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:54 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:54 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:54 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:54 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:54 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:54 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:54 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:54 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:54 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:54 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:54 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:54 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:54 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:54 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:54 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:54 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:54 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:54 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.212089 (min) 0.324656 (max)
57:54 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.102228 (min) 0.421388 (max)
57:54 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:54 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: 2.25506 (min) 4.23533 (max)
57:54 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -3.86963 (min) -2.92957 (max)
57:54 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:54 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.8012 (min) 106.7 (max)
57:54 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:54 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.1811 (min) 15.1916 (max)
57:54 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 26.3606 (min) 33.3763 (max)
57:54 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000800311 (min) 0.00116388 (max)
57:54 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:54 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:54 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:54 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:54 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:54 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:54 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:54 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:54 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:54 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:54 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:54 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:54 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:54 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 3
57:54 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 0]
57:54 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 3]
57:54 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 497.   0.]
 [  0.   0.   0.   0.   0.]
 [157.   0.   0. 537.   0.]
 [ 13.   0. 938.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:54 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:54 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:54 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:54 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:54 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.022868421886624718
57:54 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:54 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:54 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:54 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:54 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:54 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:618: 17 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:54 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:54 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:54 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:54 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:54 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:54 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:54 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:54 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:54 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:54 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 4
57:54 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:54 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 4 elements
57:54 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:54 INFO    opendrift.models.chemicaldrift:1861: partitioning: [122, 0, 294, 84, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:54 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:54 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:54 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:54 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:54 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:54 INFO    opendrift.models.basemodel:2042: 2024-06-22 23:26:45.968543 - step 66 of 96 - 500 active elements (0 deactivated)
57:54 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:54 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:54 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.84823410748809
57:54 DEBUG   opendrift.models.basemodel:2066:               10.513855162050847 <- longitude -> 10.875262497241703
57:54 DEBUG   opendrift.models.basemodel:2071:               -34.80159254570396   <- z ->   0.0
57:54 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:54 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:54 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:54 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:54 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:54 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:54 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:54 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:54 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-22 23:00:00 (before)
                2024-06-23 00:00:00 (after)
57:55 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
57:55 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
57:55 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
57:55 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
57:55 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
57:55 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_salinity']
57:55 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 64x40x7) for time after (2024-06-23 00:00:00)
57:55 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-22 23:00:00) in space  (linearNDFast)
57:55 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:55 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-23 00:00:00) in space  (linearNDFast)
57:55 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:55 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
57:55 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
57:55 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
57:55 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
57:55 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
57:55 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
57:55 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
57:55 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-22 23:00:00, weight 0.55) and
                      after (2024-06-23 00:00:00, weight 0.45) in time
57:55 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:55 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592879734 and -59.1247484838445 degrees.
57:55 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592879734 and -59.1247484838445 degrees.
57:55 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:55 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:55 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:55 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:55 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:55 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:55 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:55 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:55 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:55 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:55 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:55 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:55 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:55 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:55 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:55 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:55 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:55 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:55 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:55 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:55 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:55 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:55 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:55 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:55 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:55 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:55 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:55 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:55 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:55 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.198524 (min) 0.284401 (max)
57:55 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.0969258 (min) 0.365359 (max)
57:55 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:55 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: 2.256 (min) 4.46584 (max)
57:55 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -4.16358 (min) -3.2862 (max)
57:55 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:55 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.9013 (min) 108.739 (max)
57:55 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:55 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 12.8158 (min) 15.1718 (max)
57:55 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 26.5755 (min) 33.4722 (max)
57:55 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000700548 (min) 0.0011876 (max)
57:55 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:55 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:55 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:55 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:55 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:55 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:55 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:55 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:55 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:55 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:55 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:55 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:55 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:55 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 2
57:55 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0]
57:55 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3]
57:55 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 498.   0.]
 [  0.   0.   0.   0.   0.]
 [158.   0.   0. 542.   0.]
 [ 13.   0. 942.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:55 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:55 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:55 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:55 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:55 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.02599483456198922
57:55 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:55 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:55 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:55 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:55 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:55 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:55 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:55 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:55 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:55 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:55 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:55 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:55 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:55 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:55 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:55 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:55 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 5
57:55 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:55 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 5 elements
57:55 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:55 INFO    opendrift.models.chemicaldrift:1861: partitioning: [122, 0, 292, 86, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:55 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:55 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:55 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:55 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:55 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:55 INFO    opendrift.models.basemodel:2042: 2024-06-22 23:56:45.968543 - step 67 of 96 - 500 active elements (0 deactivated)
57:55 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:55 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:55 DEBUG   opendrift.models.basemodel:2061:               57.55687017680575 <- latitude  -> 57.851558276036435
57:55 DEBUG   opendrift.models.basemodel:2066:               10.513855162050843 <- longitude -> 10.880501463832118
57:55 DEBUG   opendrift.models.basemodel:2071:               -35.428245966122425   <- z ->   -0.02527661744358556
57:55 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:55 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:55 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:55 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:55 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:55 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:55 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:55 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:55 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-22 23:00:00 (before)
                2024-06-23 00:00:00 (after)
57:55 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-22 23:00:00) in space  (linearNDFast)
57:55 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:55 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-23 00:00:00) in space  (linearNDFast)
57:55 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:55 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-22 23:00:00, weight 0.05) and
                      after (2024-06-23 00:00:00, weight 0.95) in time
57:55 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:55 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592879734 and -59.11950951255063 degrees.
57:55 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592879734 and -59.11950951255063 degrees.
57:55 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:55 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:55 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:55 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:55 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:55 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:55 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:55 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:55 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:55 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:55 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:55 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:55 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:55 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:55 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:55 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:55 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:55 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:55 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:55 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:55 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:55 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:55 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:55 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:55 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:55 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:55 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:55 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:55 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:55 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.180551 (min) 0.264019 (max)
57:55 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.13731 (min) 0.354391 (max)
57:55 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:55 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: 2.20656 (min) 4.73447 (max)
57:55 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -4.68661 (min) -3.6695 (max)
57:55 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:55 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.96601 (min) 110.553 (max)
57:55 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:55 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 12.6996 (min) 15.1736 (max)
57:55 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 25.3888 (min) 33.4355 (max)
57:55 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000564992 (min) 0.00132714 (max)
57:55 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:55 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:55 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:55 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:55 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:55 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:55 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:55 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:55 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:55 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:55 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:55 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:55 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:55 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 7
57:55 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 2 2 2 2 2]
57:55 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 0 0 0 0 0]
57:55 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 498.   0.]
 [  0.   0.   0.   0.   0.]
 [165.   0.   0. 548.   0.]
 [ 13.   0. 947.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:55 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:55 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:55 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:55 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:55 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.029670720607957547
57:55 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:55 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:55 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:55 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:55 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:55 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:55 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:55 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:55 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:55 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:55 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:55 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:55 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:55 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:55 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:55 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 6
57:55 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:55 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 6 elements
57:55 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:55 INFO    opendrift.models.chemicaldrift:1861: partitioning: [129, 0, 284, 87, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:55 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:55 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:55 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:55 DEBUG   opendrift.models.basemodel:759: Lifting 4 elements to seafloor.
57:55 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:55 INFO    opendrift.models.basemodel:2042: 2024-06-23 00:26:45.968543 - step 68 of 96 - 500 active elements (0 deactivated)
57:55 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:55 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:55 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.85490966159252
57:55 DEBUG   opendrift.models.basemodel:2066:               10.513855162050843 <- longitude -> 10.885833228556551
57:55 DEBUG   opendrift.models.basemodel:2071:               -36.13245628866851   <- z ->   0.0
57:55 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:55 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:55 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:55 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:55 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:55 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:55 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:55 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:55 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-23 00:00:00 (before)
                2024-06-23 01:00:00 (after)
57:57 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
57:57 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
57:57 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
57:57 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
57:57 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
57:57 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_salinity']
57:57 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 65x40x7) for time after (2024-06-23 01:00:00)
57:57 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-23 00:00:00) in space  (linearNDFast)
57:57 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:57 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-23 01:00:00) in space  (linearNDFast)
57:57 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:57 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:57 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:57 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:57 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:57 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:57 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:57 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
57:57 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-23 00:00:00, weight 0.55) and
                      after (2024-06-23 01:00:00, weight 0.45) in time
57:57 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:57 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592879734 and -59.11417774292871 degrees.
57:57 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592879734 and -59.11417774292871 degrees.
57:57 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:57 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:57 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:57 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:57 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:57 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:57 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:57 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:57 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:57 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:57 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:57 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:57 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:57 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:57 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:57 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:57 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:57 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:57 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:57 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:57 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:57 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:57 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:57 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:57 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:57 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:57 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:57 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:57 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:57 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.15069 (min) 0.228124 (max)
57:57 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.136329 (min) 0.335096 (max)
57:57 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:57 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: 1.57282 (min) 5.02708 (max)
57:57 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -4.4334 (min) -3.41212 (max)
57:57 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:57 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 10.0074 (min) 112.288 (max)
57:57 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:57 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 12.7914 (min) 15.1867 (max)
57:57 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 25.8736 (min) 33.42 (max)
57:57 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000404026 (min) 0.00137174 (max)
57:57 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:57 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:57 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:57 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:57 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:57 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:57 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:57 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:57 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:57 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:57 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:57 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:57 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:57 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 5
57:57 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 0 2 2]
57:57 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 3 0 0]
57:57 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 501.   0.]
 [  0.   0.   0.   0.   0.]
 [167.   0.   0. 555.   0.]
 [ 13.   0. 953.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:57 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:57 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:57 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:57 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:57 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.0305237180156919
57:57 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:57 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:57 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:57 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:57 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:57 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
57:57 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
57:57 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:57 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:57 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:57 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:57 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:57 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:57 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:57 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:57 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:57 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:57 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:57 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:57 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:57 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:57 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:57 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:57 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:57 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 2
57:57 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:57 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 2 elements
57:57 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:57 INFO    opendrift.models.chemicaldrift:1861: partitioning: [128, 0, 273, 99, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:57 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:57 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:57 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:57 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:57 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:57 INFO    opendrift.models.basemodel:2042: 2024-06-23 00:56:45.968543 - step 69 of 96 - 500 active elements (0 deactivated)
57:57 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:57 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:57 DEBUG   opendrift.models.basemodel:2061:               57.55687017680575 <- latitude  -> 57.858377799472436
57:57 DEBUG   opendrift.models.basemodel:2066:               10.513855162050843 <- longitude -> 10.891108326699669
57:57 DEBUG   opendrift.models.basemodel:2071:               -37.01707092064355   <- z ->   0.0
57:57 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:57 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:57 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:57 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:57 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:57 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:57 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:57 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:57 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-23 00:00:00 (before)
                2024-06-23 01:00:00 (after)
57:57 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-23 00:00:00) in space  (linearNDFast)
57:57 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:57 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:57 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:57 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:57 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:57 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:57 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:57 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:57 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-23 01:00:00) in space  (linearNDFast)
57:57 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:57 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:57 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:57 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:57 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:57 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:57 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:57 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:57 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-23 00:00:00, weight 0.05) and
                      after (2024-06-23 01:00:00, weight 0.95) in time
57:57 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:57 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592879734 and -59.10890265405526 degrees.
57:57 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592879734 and -59.10890265405526 degrees.
57:57 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:57 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:57 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:57 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:57 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:57 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:57 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:57 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:57 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:57 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:57 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:57 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:57 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:57 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:57 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:57 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:57 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:57 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:57 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:57 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:57 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:57 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:57 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:57 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:57 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:57 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:57 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:57 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:57 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:57 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.151529 (min) 0.216307 (max)
57:57 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.19579 (min) 0.326401 (max)
57:57 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:57 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: 0.909324 (min) 5.39245 (max)
57:57 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -4.33768 (min) -3.08117 (max)
57:57 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:57 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 10.0168 (min) 114.046 (max)
57:57 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:57 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 12.8914 (min) 15.1437 (max)
57:57 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 25.3879 (min) 33.4037 (max)
57:57 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000210421 (min) 0.00153067 (max)
57:57 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:57 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:57 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:57 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:57 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:57 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:57 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:57 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:57 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:57 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:57 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:57 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:57 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:57 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 4
57:57 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 2 2]
57:57 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 0 0]
57:57 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 502.   0.]
 [  0.   0.   0.   0.   0.]
 [170.   0.   0. 566.   0.]
 [ 13.   0. 955.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:57 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:57 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:57 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:57 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:57 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.031199839494236395
57:57 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:57 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:57 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:57 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:57 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:57 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:57 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:57 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:618: 1 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:57 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:57 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:618: 1 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:57 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:57 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:57 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:57 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 1
57:57 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:57 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 1 elements
57:57 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:57 INFO    opendrift.models.chemicaldrift:1861: partitioning: [130, 0, 267, 103, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:57 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:57 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:57 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:57 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:57 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:57 INFO    opendrift.models.basemodel:2042: 2024-06-23 01:26:45.968543 - step 70 of 96 - 500 active elements (0 deactivated)
57:57 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:57 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:57 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.86093433896099
57:57 DEBUG   opendrift.models.basemodel:2066:               10.513855162050843 <- longitude -> 10.896714563491981
57:57 DEBUG   opendrift.models.basemodel:2071:               -34.285543554539025   <- z ->   0.0
57:57 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:57 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:57 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:57 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:57 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:57 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:57 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:57 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:57 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-23 01:00:00 (before)
                2024-06-23 02:00:00 (after)
57:59 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
57:59 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
57:59 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
57:59 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
57:59 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
57:59 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_salinity']
57:59 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 66x42x7) for time after (2024-06-23 02:00:00)
57:59 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-23 01:00:00) in space  (linearNDFast)
57:59 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:59 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-23 02:00:00) in space  (linearNDFast)
57:59 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:59 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:59 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:59 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:59 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:59 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:59 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:59 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:59 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:59 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:59 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:59 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:59 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:59 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:59 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
57:59 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-23 01:00:00, weight 0.55) and
                      after (2024-06-23 02:00:00, weight 0.45) in time
57:59 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:59 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592879734 and -59.10329642061598 degrees.
57:59 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592879734 and -59.10329642061598 degrees.
57:59 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:59 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:59 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:59 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:59 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:59 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:59 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:59 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:59 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:59 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:59 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:59 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:59 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:59 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:59 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:59 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:59 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:59 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:59 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:59 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:59 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:59 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:59 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:59 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:59 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:59 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:59 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:59 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:59 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:59 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.143569 (min) 0.237732 (max)
57:59 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.245297 (min) 0.327438 (max)
57:59 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:59 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: 1.53331 (min) 5.80326 (max)
57:59 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -4.50478 (min) -3.36386 (max)
57:59 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:59 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 10.0161 (min) 115.313 (max)
57:59 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:59 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 12.7664 (min) 15.1465 (max)
57:59 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 26.0214 (min) 33.4207 (max)
57:59 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000134963 (min) 0.00135771 (max)
57:59 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:59 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:59 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:59 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:59 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:59 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:59 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:59 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:59 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:59 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:59 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:59 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:59 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:59 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 3
57:59 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 2]
57:59 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 0]
57:59 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 504.   0.]
 [  0.   0.   0.   0.   0.]
 [171.   0.   0. 570.   0.]
 [ 13.   0. 956.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:59 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:59 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:59 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:59 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:59 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.03623592438364959
57:59 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:59 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:59 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:59 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:59 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:59 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:59 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:59 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:59 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 2
57:59 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:59 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 2 elements
57:59 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:59 INFO    opendrift.models.chemicaldrift:1861: partitioning: [129, 0, 266, 105, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:59 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:59 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:59 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:59 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:59 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:59 INFO    opendrift.models.basemodel:2042: 2024-06-23 01:56:45.968543 - step 71 of 96 - 500 active elements (0 deactivated)
57:59 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:59 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:59 DEBUG   opendrift.models.basemodel:2061:               57.55687017680575 <- latitude  -> 57.86378984106659
57:59 DEBUG   opendrift.models.basemodel:2066:               10.513855162050842 <- longitude -> 10.903908816260142
57:59 DEBUG   opendrift.models.basemodel:2071:               -34.62910423102372   <- z ->   0.0
57:59 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:59 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:59 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:59 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:59 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:59 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:59 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:59 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:59 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-23 01:00:00 (before)
                2024-06-23 02:00:00 (after)
57:59 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-23 01:00:00) in space  (linearNDFast)
57:59 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:59 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-23 02:00:00) in space  (linearNDFast)
57:59 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
57:59 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-23 01:00:00, weight 0.05) and
                      after (2024-06-23 02:00:00, weight 0.95) in time
57:59 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
57:59 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592879734 and -59.09610216906996 degrees.
57:59 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592879734 and -59.09610216906996 degrees.
57:59 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:59 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:59 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
57:59 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:59 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
57:59 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:59 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:59 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
57:59 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:59 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:59 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:59 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:59 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
57:59 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:59 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
57:59 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:59 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:59 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
57:59 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
57:59 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
57:59 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
57:59 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
57:59 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
57:59 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
57:59 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
57:59 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
57:59 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
57:59 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
57:59 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
57:59 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.153398 (min) 0.250475 (max)
57:59 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.254061 (min) 0.321486 (max)
57:59 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
57:59 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: 2.33365 (min) 6.23913 (max)
57:59 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -4.71443 (min) -3.6032 (max)
57:59 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
57:59 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 10.0069 (min) 116.71 (max)
57:59 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
57:59 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 13.0296 (min) 15.1471 (max)
57:59 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 25.5472 (min) 33.4594 (max)
57:59 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000223472 (min) 0.0013685 (max)
57:59 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
57:59 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
57:59 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
57:59 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
57:59 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
57:59 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
57:59 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
57:59 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
57:59 DEBUG   opendrift.models.basemodel:759: Lifting 3 elements to seafloor.
57:59 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
57:59 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
57:59 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
57:59 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
57:59 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 9
57:59 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 2 2 2 2 2 0 2]
57:59 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 0 0 0 0 0 3 0]
57:59 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 506.   0.]
 [  0.   0.   0.   0.   0.]
 [178.   0.   0. 572.   0.]
 [ 13.   0. 958.   0.   0.]
 [  0.   0.   0.   0.   0.]]
57:59 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
57:59 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:59 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
57:59 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
57:59 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.042222524982515344
57:59 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
57:59 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
57:59 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
57:59 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:59 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:59 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:59 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:59 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
57:59 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
57:59 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
57:59 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
57:59 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 4
57:59 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
57:59 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 4 elements
57:59 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
57:59 INFO    opendrift.models.chemicaldrift:1861: partitioning: [134, 0, 260, 106, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
57:59 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
57:59 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
57:59 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
57:59 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
57:59 DEBUG   opendrift.models.basemodel:2041: ======================================================================
57:59 INFO    opendrift.models.basemodel:2042: 2024-06-23 02:26:45.968543 - step 72 of 96 - 500 active elements (0 deactivated)
57:59 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
57:59 DEBUG   opendrift.models.basemodel:2050: ======================================================================
57:59 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.86639293921206
57:59 DEBUG   opendrift.models.basemodel:2066:               10.513855162050842 <- longitude -> 10.911488542790169
57:59 DEBUG   opendrift.models.basemodel:2071:               -34.72616528844818   <- z ->   0.0
57:59 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
57:59 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
57:59 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
57:59 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
57:59 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
57:59 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
57:59 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
57:59 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
57:59 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-23 02:00:00 (before)
                2024-06-23 03:00:00 (after)
58:01 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
58:01 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
58:01 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
58:01 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
58:01 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
58:01 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_salinity']
58:01 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 66x44x7) for time after (2024-06-23 03:00:00)
58:01 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-23 02:00:00) in space  (linearNDFast)
58:01 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
58:01 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-23 03:00:00) in space  (linearNDFast)
58:01 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:01 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-23 02:00:00, weight 0.55) and
                      after (2024-06-23 03:00:00, weight 0.45) in time
58:01 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
58:01 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592879734 and -59.08852243870692 degrees.
58:01 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592879734 and -59.08852243870692 degrees.
58:01 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:01 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:01 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
58:01 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:01 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
58:01 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:01 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:01 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
58:01 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
58:01 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
58:01 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:01 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:01 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
58:01 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:01 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
58:01 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:01 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:01 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
58:01 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
58:01 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
58:01 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
58:01 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:01 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
58:01 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
58:01 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
58:01 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
58:01 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
58:01 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
58:01 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
58:01 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.143679 (min) 0.277305 (max)
58:01 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.249692 (min) 0.307193 (max)
58:01 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
58:01 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: 2.42222 (min) 5.17225 (max)
58:01 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -5.47406 (min) -4.46918 (max)
58:01 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
58:01 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.96352 (min) 117.978 (max)
58:01 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
58:01 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 12.7787 (min) 15.1108 (max)
58:01 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 26.1804 (min) 33.4466 (max)
58:01 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000178565 (min) 0.00110413 (max)
58:01 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
58:01 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
58:01 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
58:01 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
58:01 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
58:01 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
58:01 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
58:01 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
58:01 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
58:01 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
58:01 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
58:01 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
58:01 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
58:01 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 6
58:01 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 2 2 0 2]
58:01 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 0 0 3 0]
58:01 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 508.   0.]
 [  0.   0.   0.   0.   0.]
 [182.   0.   0. 575.   0.]
 [ 13.   0. 962.   0.   0.]
 [  0.   0.   0.   0.   0.]]
58:01 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
58:01 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
58:01 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
58:01 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
58:01 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.03798332793711167
58:01 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
58:01 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
58:01 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
58:01 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:01 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:01 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:01 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:01 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:01 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:01 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:01 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:01 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
58:01 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
58:01 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:01 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:01 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
58:01 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 1
58:01 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
58:01 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 1 elements
58:01 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
58:01 INFO    opendrift.models.chemicaldrift:1861: partitioning: [136, 0, 250, 114, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
58:01 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
58:01 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
58:01 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
58:01 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
58:01 DEBUG   opendrift.models.basemodel:2041: ======================================================================
58:01 INFO    opendrift.models.basemodel:2042: 2024-06-23 02:56:45.968543 - step 73 of 96 - 500 active elements (0 deactivated)
58:01 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
58:01 DEBUG   opendrift.models.basemodel:2050: ======================================================================
58:01 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.869959416441034
58:01 DEBUG   opendrift.models.basemodel:2066:               10.513855162050845 <- longitude -> 10.919879866202125
58:01 DEBUG   opendrift.models.basemodel:2071:               -35.87955626990265   <- z ->   0.0
58:01 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
58:01 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:01 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
58:01 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:01 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
58:01 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:01 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:01 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
58:01 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-23 02:00:00 (before)
                2024-06-23 03:00:00 (after)
58:01 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-23 02:00:00) in space  (linearNDFast)
58:01 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:01 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-23 03:00:00) in space  (linearNDFast)
58:01 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:01 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:01 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-23 02:00:00, weight 0.05) and
                      after (2024-06-23 03:00:00, weight 0.95) in time
58:01 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
58:01 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592879734 and -59.08013112068847 degrees.
58:01 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592879734 and -59.08013112068847 degrees.
58:01 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:01 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:01 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
58:01 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:01 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
58:01 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:01 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:01 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
58:01 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
58:01 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
58:01 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:01 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:01 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
58:01 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:01 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
58:01 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:01 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:01 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
58:01 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
58:01 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
58:01 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
58:01 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:01 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
58:01 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
58:01 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
58:01 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
58:01 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
58:01 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
58:01 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
58:01 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.14496 (min) 0.217631 (max)
58:01 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.271687 (min) 0.305337 (max)
58:01 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
58:01 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: 2.19808 (min) 3.9481 (max)
58:01 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -6.33297 (min) -5.11971 (max)
58:01 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
58:01 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.93494 (min) 119.752 (max)
58:01 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
58:01 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 12.8437 (min) 15.1206 (max)
58:01 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 25.9301 (min) 33.4864 (max)
58:01 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.00015605 (min) 0.000997955 (max)
58:01 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
58:01 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
58:01 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
58:01 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
58:01 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
58:01 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
58:01 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
58:01 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
58:01 DEBUG   opendrift.models.basemodel:759: Lifting 3 elements to seafloor.
58:01 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
58:01 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
58:01 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
58:01 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
58:01 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 6
58:01 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 2 2 0 2]
58:01 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 0 0 3 0]
58:01 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 510.   0.]
 [  0.   0.   0.   0.   0.]
 [186.   0.   0. 582.   0.]
 [ 13.   0. 963.   0.   0.]
 [  0.   0.   0.   0.   0.]]
58:01 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
58:01 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
58:01 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
58:01 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
58:01 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.035367484754073385
58:01 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
58:01 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
58:01 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
58:01 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:01 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:01 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:01 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:01 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
58:01 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
58:01 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:01 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:01 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
58:01 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:01 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 4
58:01 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
58:01 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 4 elements
58:01 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
58:01 INFO    opendrift.models.chemicaldrift:1861: partitioning: [138, 0, 245, 117, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
58:01 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
58:01 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
58:01 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
58:01 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
58:01 DEBUG   opendrift.models.basemodel:2041: ======================================================================
58:01 INFO    opendrift.models.basemodel:2042: 2024-06-23 03:26:45.968543 - step 74 of 96 - 500 active elements (0 deactivated)
58:01 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
58:01 DEBUG   opendrift.models.basemodel:2050: ======================================================================
58:01 DEBUG   opendrift.models.basemodel:2061:               57.55687017680575 <- latitude  -> 57.874164953935605
58:01 DEBUG   opendrift.models.basemodel:2066:               10.51385516205084 <- longitude -> 10.926464697097611
58:01 DEBUG   opendrift.models.basemodel:2071:               -36.45223256160045   <- z ->   -0.07296123438093982
58:01 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
58:01 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:01 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
58:01 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:01 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
58:01 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:01 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:01 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
58:01 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-23 03:00:00 (before)
                2024-06-23 04:00:00 (after)
58:02 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
58:02 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
58:02 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
58:02 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
58:02 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
58:02 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_salinity']
58:02 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 67x45x7) for time after (2024-06-23 04:00:00)
58:02 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-23 03:00:00) in space  (linearNDFast)
58:02 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
58:02 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-23 04:00:00) in space  (linearNDFast)
58:02 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
58:02 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:02 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:02 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:02 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:02 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:02 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:02 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:02 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:02 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:02 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:02 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:02 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:02 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:02 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:02 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:02 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:02 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:02 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:02 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:02 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:02 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:02 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:02 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:02 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:02 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:02 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:02 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:02 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:02 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:02 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:02 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:02 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:02 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:02 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:02 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:02 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:02 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:02 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-23 03:00:00, weight 0.55) and
                      after (2024-06-23 04:00:00, weight 0.45) in time
58:02 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
58:02 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592879734 and -59.07354627928329 degrees.
58:02 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592879734 and -59.07354627928329 degrees.
58:02 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:02 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:02 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
58:02 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:02 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
58:02 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:02 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:02 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
58:02 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
58:02 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
58:02 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:02 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:02 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
58:02 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:02 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
58:02 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:02 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:02 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
58:02 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
58:02 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
58:02 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
58:02 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:02 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
58:02 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
58:02 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
58:02 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
58:02 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
58:02 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
58:02 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
58:02 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.172343 (min) 0.207316 (max)
58:02 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.244353 (min) 0.318571 (max)
58:02 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
58:02 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: 1.88511 (min) 3.76224 (max)
58:02 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -6.16349 (min) -4.85228 (max)
58:02 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
58:02 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.88317 (min) 121.886 (max)
58:02 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
58:02 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 12.3168 (min) 15.0868 (max)
58:02 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 25.9467 (min) 33.5721 (max)
58:02 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000178436 (min) 0.000997086 (max)
58:02 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
58:02 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
58:02 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
58:02 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
58:02 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
58:02 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
58:02 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
58:02 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
58:02 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
58:02 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
58:02 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
58:02 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
58:02 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
58:02 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 5
58:02 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 2 0 0]
58:02 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 0 3 3]
58:02 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 513.   0.]
 [  0.   0.   0.   0.   0.]
 [188.   0.   0. 587.   0.]
 [ 13.   0. 967.   0.   0.]
 [  0.   0.   0.   0.   0.]]
58:02 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
58:02 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
58:02 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
58:02 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
58:02 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.03276740859498245
58:02 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
58:02 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
58:02 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
58:02 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:02 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:02 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:02 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:02 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:02 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:02 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:02 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:02 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:02 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:02 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:02 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:02 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:02 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:02 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:02 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 3
58:02 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
58:02 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 3 elements
58:02 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
58:02 INFO    opendrift.models.chemicaldrift:1861: partitioning: [137, 0, 239, 124, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
58:02 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
58:02 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
58:02 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
58:02 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
58:02 DEBUG   opendrift.models.basemodel:2041: ======================================================================
58:02 INFO    opendrift.models.basemodel:2042: 2024-06-23 03:56:45.968543 - step 75 of 96 - 500 active elements (0 deactivated)
58:02 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
58:02 DEBUG   opendrift.models.basemodel:2050: ======================================================================
58:02 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.87807667558952
58:02 DEBUG   opendrift.models.basemodel:2066:               10.513855162050834 <- longitude -> 10.932736737885934
58:02 DEBUG   opendrift.models.basemodel:2071:               -38.544393049848075   <- z ->   0.0
58:02 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
58:02 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:02 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
58:02 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:02 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
58:02 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:02 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:02 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
58:02 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-23 03:00:00 (before)
                2024-06-23 04:00:00 (after)
58:02 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-23 03:00:00) in space  (linearNDFast)
58:02 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
58:02 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-23 04:00:00) in space  (linearNDFast)
58:02 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
58:02 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-23 03:00:00, weight 0.05) and
                      after (2024-06-23 04:00:00, weight 0.95) in time
58:02 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
58:02 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592879734 and -59.067274237319786 degrees.
58:02 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592879734 and -59.067274237319786 degrees.
58:02 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:02 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:02 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
58:02 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:02 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
58:02 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:02 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:02 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
58:02 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
58:02 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
58:02 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:02 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:02 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
58:02 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:02 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
58:02 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:02 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:02 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
58:02 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
58:02 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
58:02 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
58:02 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:02 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
58:02 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
58:02 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
58:02 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
58:02 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
58:02 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
58:02 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
58:02 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.190009 (min) 0.209274 (max)
58:02 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.219009 (min) 0.333228 (max)
58:02 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
58:02 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: 1.44343 (min) 3.70183 (max)
58:02 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -5.89392 (min) -4.48217 (max)
58:02 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
58:02 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.86075 (min) 123.974 (max)
58:02 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
58:02 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 12.1246 (min) 15.0837 (max)
58:02 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 26.0669 (min) 33.6284 (max)
58:02 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.00043948 (min) 0.00121137 (max)
58:02 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
58:02 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
58:02 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
58:02 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
58:02 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
58:02 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
58:02 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
58:02 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
58:02 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
58:02 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
58:02 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
58:02 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
58:02 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
58:02 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 1
58:02 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2]
58:02 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0]
58:02 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 513.   0.]
 [  0.   0.   0.   0.   0.]
 [189.   0.   0. 594.   0.]
 [ 13.   0. 970.   0.   0.]
 [  0.   0.   0.   0.   0.]]
58:02 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
58:02 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
58:02 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
58:02 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
58:02 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.03009405425652495
58:02 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
58:02 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
58:02 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
58:02 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:02 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:02 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:02 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:02 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:02 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:02 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:02 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:02 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:02 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:02 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:02 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:02 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:02 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:02 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
58:02 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
58:02 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 2
58:02 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
58:02 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 2 elements
58:02 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
58:02 INFO    opendrift.models.chemicaldrift:1861: partitioning: [138, 0, 233, 129, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
58:02 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
58:02 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
58:02 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
58:02 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
58:02 DEBUG   opendrift.models.basemodel:2041: ======================================================================
58:02 INFO    opendrift.models.basemodel:2042: 2024-06-23 04:26:45.968543 - step 76 of 96 - 500 active elements (0 deactivated)
58:02 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
58:02 DEBUG   opendrift.models.basemodel:2050: ======================================================================
58:02 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.881845270739944
58:02 DEBUG   opendrift.models.basemodel:2066:               10.51385516205083 <- longitude -> 10.939067421931767
58:02 DEBUG   opendrift.models.basemodel:2071:               -38.10639689911561   <- z ->   0.0
58:02 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
58:02 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:02 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
58:02 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:02 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
58:02 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:02 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:02 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
58:02 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-23 04:00:00 (before)
                2024-06-23 05:00:00 (after)
58:04 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
58:04 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
58:04 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
58:04 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
58:04 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
58:04 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_salinity']
58:04 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 68x46x7) for time after (2024-06-23 05:00:00)
58:04 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-23 04:00:00) in space  (linearNDFast)
58:04 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
58:04 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-23 05:00:00) in space  (linearNDFast)
58:04 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
58:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:04 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:04 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-23 04:00:00, weight 0.55) and
                      after (2024-06-23 05:00:00, weight 0.45) in time
58:04 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
58:04 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615593067373 and -59.06094356594737 degrees.
58:04 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615593067373 and -59.06094356594737 degrees.
58:04 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:04 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:04 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
58:04 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:04 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
58:04 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:04 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:04 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
58:04 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
58:04 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
58:04 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:04 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:04 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
58:04 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:04 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
58:04 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:04 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:04 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
58:04 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
58:04 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
58:04 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
58:04 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:04 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
58:04 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
58:04 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
58:04 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
58:04 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
58:04 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
58:04 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
58:04 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.204561 (min) 0.214268 (max)
58:04 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.259883 (min) 0.415123 (max)
58:04 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
58:04 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: 1.43359 (min) 3.66619 (max)
58:04 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -5.35871 (min) -4.28664 (max)
58:04 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
58:04 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.84603 (min) 126.125 (max)
58:04 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
58:04 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 12.1287 (min) 15.0773 (max)
58:04 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 25.7049 (min) 33.5851 (max)
58:04 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000520562 (min) 0.000871637 (max)
58:04 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
58:04 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
58:04 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
58:04 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
58:04 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
58:04 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
58:04 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
58:04 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
58:04 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
58:04 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
58:04 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
58:04 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
58:04 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
58:04 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 6
58:04 DEBUG   opendrift.models.chemicaldrift:1452: old species: [3 0 2 2 2 0]
58:04 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 0 0 0 3]
58:04 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 515.   0.]
 [  0.   0.   0.   0.   0.]
 [192.   0.   0. 601.   0.]
 [ 14.   0. 972.   0.   0.]
 [  0.   0.   0.   0.   0.]]
58:04 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
58:04 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
58:04 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
58:04 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
58:04 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.02920549278346736
58:04 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
58:04 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
58:04 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
58:04 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:04 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:04 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:04 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:04 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:04 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:04 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:04 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:04 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
58:04 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
58:04 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:04 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 1
58:04 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
58:04 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 1 elements
58:04 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
58:04 INFO    opendrift.models.chemicaldrift:1861: partitioning: [140, 0, 225, 135, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
58:04 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
58:04 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
58:04 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
58:04 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
58:04 DEBUG   opendrift.models.basemodel:2041: ======================================================================
58:04 INFO    opendrift.models.basemodel:2042: 2024-06-23 04:56:45.968543 - step 77 of 96 - 500 active elements (0 deactivated)
58:04 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
58:04 DEBUG   opendrift.models.basemodel:2050: ======================================================================
58:04 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.88571446510401
58:04 DEBUG   opendrift.models.basemodel:2066:               10.51385516205083 <- longitude -> 10.94388070293728
58:04 DEBUG   opendrift.models.basemodel:2071:               -38.18455895827775   <- z ->   0.0
58:04 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
58:04 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:04 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
58:04 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:04 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
58:04 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:04 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:04 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
58:04 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-23 04:00:00 (before)
                2024-06-23 05:00:00 (after)
58:04 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-23 04:00:00) in space  (linearNDFast)
58:04 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
58:04 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-23 05:00:00) in space  (linearNDFast)
58:04 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
58:04 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-23 04:00:00, weight 0.05) and
                      after (2024-06-23 05:00:00, weight 0.95) in time
58:04 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
58:04 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615593067373 and -59.056130281819634 degrees.
58:04 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615593067373 and -59.056130281819634 degrees.
58:04 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:04 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:04 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
58:04 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:04 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
58:04 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:04 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:04 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
58:04 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
58:04 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
58:04 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:04 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:04 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
58:04 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:04 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
58:04 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:04 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:04 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
58:04 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
58:04 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
58:04 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
58:04 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:04 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
58:04 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
58:04 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
58:04 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
58:04 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
58:04 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
58:04 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
58:04 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.239513 (min) 0.308256 (max)
58:04 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.222112 (min) 0.507389 (max)
58:04 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
58:04 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: 1.46379 (min) 3.69705 (max)
58:04 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -5.08312 (min) -4.10524 (max)
58:04 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
58:04 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.83499 (min) 128.444 (max)
58:04 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
58:04 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 12.4333 (min) 15.0598 (max)
58:04 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 25.7157 (min) 33.5567 (max)
58:04 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000599951 (min) 0.00100393 (max)
58:04 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
58:04 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
58:04 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
58:04 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
58:04 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
58:04 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
58:04 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
58:04 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
58:04 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:04 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
58:04 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
58:04 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
58:04 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
58:04 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 4
58:04 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 2 2]
58:04 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 0 0]
58:04 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 516.   0.]
 [  0.   0.   0.   0.   0.]
 [195.   0.   0. 607.   0.]
 [ 14.   0. 973.   0.   0.]
 [  0.   0.   0.   0.   0.]]
58:04 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
58:04 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
58:04 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
58:04 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
58:04 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.028551966234001008
58:04 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
58:04 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
58:04 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
58:04 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:04 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:04 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:618: 16 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:04 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:04 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:04 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:04 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:04 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:04 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:04 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
58:04 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 1
58:04 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
58:04 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 1 elements
58:04 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
58:04 INFO    opendrift.models.chemicaldrift:1861: partitioning: [142, 0, 219, 139, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
58:04 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
58:04 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
58:04 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
58:04 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
58:04 DEBUG   opendrift.models.basemodel:2041: ======================================================================
58:04 INFO    opendrift.models.basemodel:2042: 2024-06-23 05:26:45.968543 - step 78 of 96 - 500 active elements (0 deactivated)
58:04 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
58:04 DEBUG   opendrift.models.basemodel:2050: ======================================================================
58:04 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.88971178979985
58:04 DEBUG   opendrift.models.basemodel:2066:               10.51385516205083 <- longitude -> 10.948338337783602
58:04 DEBUG   opendrift.models.basemodel:2071:               -39.72063183411358   <- z ->   -0.19940738619174658
58:04 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
58:04 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:04 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
58:04 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:04 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
58:04 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:04 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:04 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
58:04 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-23 05:00:00 (before)
                2024-06-23 06:00:00 (after)
58:05 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
58:05 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
58:05 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
58:05 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
58:05 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
58:05 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_salinity']
58:05 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 69x48x7) for time after (2024-06-23 06:00:00)
58:05 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-23 05:00:00) in space  (linearNDFast)
58:05 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
58:05 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-23 06:00:00) in space  (linearNDFast)
58:05 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
58:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:05 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:05 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-23 05:00:00, weight 0.55) and
                      after (2024-06-23 06:00:00, weight 0.45) in time
58:05 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
58:05 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615593067373 and -59.05167264751127 degrees.
58:05 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615593067373 and -59.05167264751127 degrees.
58:05 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:05 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:05 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
58:05 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:05 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
58:05 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:05 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:05 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
58:05 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
58:05 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
58:05 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:05 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:05 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
58:05 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:05 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
58:05 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:05 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:05 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
58:05 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
58:05 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
58:05 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
58:05 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:05 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
58:05 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
58:05 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
58:05 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
58:05 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
58:05 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
58:05 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
58:05 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.254125 (min) 0.342673 (max)
58:05 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.175071 (min) 0.486152 (max)
58:05 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
58:05 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: 1.91154 (min) 3.72356 (max)
58:05 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -4.86852 (min) -3.89367 (max)
58:05 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
58:05 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.85616 (min) 131.171 (max)
58:05 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
58:05 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 12.3488 (min) 15.0485 (max)
58:05 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 25.9423 (min) 33.6475 (max)
58:05 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000520075 (min) 0.000730859 (max)
58:05 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
58:05 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
58:05 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
58:05 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
58:05 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
58:05 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
58:05 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
58:05 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
58:05 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
58:05 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
58:05 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
58:05 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
58:05 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
58:05 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 4
58:05 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0 2 2]
58:05 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3 0 0]
58:05 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 518.   0.]
 [  0.   0.   0.   0.   0.]
 [197.   0.   0. 611.   0.]
 [ 14.   0. 974.   0.   0.]
 [  0.   0.   0.   0.   0.]]
58:05 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
58:05 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
58:05 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
58:05 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
58:05 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.027150852916636357
58:05 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
58:05 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
58:05 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
58:05 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:05 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:05 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:05 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:05 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:05 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:05 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:618: 15 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:05 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:05 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:05 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:05 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:05 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 8
58:05 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
58:05 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 8 elements
58:05 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
58:05 INFO    opendrift.models.chemicaldrift:1861: partitioning: [142, 0, 220, 138, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
58:05 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
58:05 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
58:05 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
58:05 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:05 DEBUG   opendrift.models.basemodel:2041: ======================================================================
58:05 INFO    opendrift.models.basemodel:2042: 2024-06-23 05:56:45.968543 - step 79 of 96 - 500 active elements (0 deactivated)
58:05 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
58:05 DEBUG   opendrift.models.basemodel:2050: ======================================================================
58:05 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.893543019473825
58:05 DEBUG   opendrift.models.basemodel:2066:               10.51385516205083 <- longitude -> 10.952656873844436
58:05 DEBUG   opendrift.models.basemodel:2071:               -40.42969860642904   <- z ->   0.0
58:05 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
58:05 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:05 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
58:05 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:05 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
58:05 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:05 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:05 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
58:05 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-23 05:00:00 (before)
                2024-06-23 06:00:00 (after)
58:05 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-23 05:00:00) in space  (linearNDFast)
58:05 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
58:05 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-23 06:00:00) in space  (linearNDFast)
58:05 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
58:05 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-23 05:00:00, weight 0.05) and
                      after (2024-06-23 06:00:00, weight 0.95) in time
58:05 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
58:05 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615593067373 and -59.047354115093206 degrees.
58:05 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615593067373 and -59.047354115093206 degrees.
58:05 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:05 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:05 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
58:05 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:05 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
58:05 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:05 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:05 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
58:05 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
58:05 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
58:05 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:05 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:05 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
58:05 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:05 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
58:05 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:05 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:05 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
58:05 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
58:05 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
58:05 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
58:05 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:05 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
58:05 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
58:05 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
58:05 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
58:05 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
58:05 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
58:05 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
58:05 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.266453 (min) 0.300715 (max)
58:05 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.209148 (min) 0.525122 (max)
58:05 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
58:05 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: 2.40847 (min) 4.04208 (max)
58:05 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -4.64374 (min) -3.67541 (max)
58:05 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
58:05 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.88719 (min) 133.947 (max)
58:05 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
58:05 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 12.2722 (min) 15.0691 (max)
58:05 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 26.1033 (min) 33.6586 (max)
58:05 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000555593 (min) 0.00100384 (max)
58:05 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
58:05 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
58:05 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
58:05 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
58:05 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
58:05 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
58:05 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
58:05 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
58:05 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
58:05 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
58:05 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
58:05 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
58:05 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
58:05 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 3
58:05 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 2 0]
58:05 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 0 3]
58:05 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 520.   0.]
 [  0.   0.   0.   0.   0.]
 [198.   0.   0. 616.   0.]
 [ 14.   0. 982.   0.   0.]
 [  0.   0.   0.   0.   0.]]
58:05 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
58:05 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
58:05 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
58:05 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
58:05 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.026480616711025185
58:05 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
58:05 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
58:05 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
58:05 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:05 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:05 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:05 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:05 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:05 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:05 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
58:05 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:05 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 9
58:05 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
58:05 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 9 elements
58:05 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
58:05 INFO    opendrift.models.chemicaldrift:1861: partitioning: [141, 0, 225, 134, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
58:05 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
58:05 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
58:05 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
58:05 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:05 DEBUG   opendrift.models.basemodel:2041: ======================================================================
58:05 INFO    opendrift.models.basemodel:2042: 2024-06-23 06:26:45.968543 - step 80 of 96 - 500 active elements (0 deactivated)
58:05 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
58:05 DEBUG   opendrift.models.basemodel:2050: ======================================================================
58:05 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.897741107425965
58:05 DEBUG   opendrift.models.basemodel:2066:               10.513855162050831 <- longitude -> 10.9554306137835
58:05 DEBUG   opendrift.models.basemodel:2071:               -40.47152098364468   <- z ->   -0.18401745866170516
58:05 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
58:05 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:05 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
58:05 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:05 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
58:05 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:05 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:05 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
58:05 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-23 06:00:00 (before)
                2024-06-23 07:00:00 (after)
58:07 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
58:07 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
58:07 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
58:07 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
58:07 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
58:07 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_salinity']
58:07 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 70x49x7) for time after (2024-06-23 07:00:00)
58:07 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-23 06:00:00) in space  (linearNDFast)
58:07 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
58:07 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-23 07:00:00) in space  (linearNDFast)
58:07 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
58:07 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:07 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:07 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:07 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:07 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:07 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:07 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:07 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:07 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:07 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:07 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:07 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:07 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:07 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:07 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:07 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:07 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:07 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:07 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:07 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:07 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:07 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:07 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:07 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
58:07 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
58:07 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
58:07 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
58:07 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
58:07 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
58:07 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
58:07 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:07 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:07 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:07 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:07 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:07 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:07 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:07 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-23 06:00:00, weight 0.55) and
                      after (2024-06-23 07:00:00, weight 0.45) in time
58:07 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
58:07 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592879734 and -59.044580371047104 degrees.
58:07 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592879734 and -59.044580371047104 degrees.
58:07 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:07 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:07 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
58:07 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:07 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
58:07 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:07 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:07 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
58:07 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
58:07 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
58:07 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:07 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:07 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
58:07 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:07 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
58:07 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:07 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:07 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
58:07 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
58:07 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
58:07 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
58:07 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:07 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
58:07 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
58:07 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
58:07 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
58:07 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
58:07 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
58:07 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
58:07 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.266316 (min) 0.307742 (max)
58:07 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.113191 (min) 0.524014 (max)
58:07 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
58:07 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: 3.08451 (min) 3.91996 (max)
58:07 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -4.2487 (min) -3.22457 (max)
58:07 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
58:07 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.9359 (min) 137.276 (max)
58:07 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
58:07 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 12.1561 (min) 15.0673 (max)
58:07 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 26.1637 (min) 33.6918 (max)
58:07 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000573974 (min) 0.000834699 (max)
58:07 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
58:07 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
58:07 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
58:07 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
58:07 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
58:07 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
58:07 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
58:07 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
58:07 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:07 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
58:07 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
58:07 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
58:07 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
58:07 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 9
58:07 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 0 2 2 2 2 2 2]
58:07 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 3 0 0 0 0 0 0]
58:07 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[  0.   0.   0. 521.   0.]
 [  0.   0.   0.   0.   0.]
 [206.   0.   0. 619.   0.]
 [ 14.   0. 991.   0.   0.]
 [  0.   0.   0.   0.   0.]]
58:07 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
58:07 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
58:07 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
58:07 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
58:07 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.023845762013442243
58:07 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
58:07 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
58:07 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
58:07 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:07 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:07 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:07 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:07 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:07 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:07 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:07 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:07 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:07 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 27
58:07 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
58:07 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 27 elements
58:07 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
58:07 INFO    opendrift.models.chemicaldrift:1861: partitioning: [148, 0, 240, 112, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
58:07 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
58:07 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
58:07 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
58:07 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
58:07 DEBUG   opendrift.models.basemodel:2041: ======================================================================
58:07 INFO    opendrift.models.basemodel:2042: 2024-06-23 06:56:45.968543 - step 81 of 96 - 500 active elements (0 deactivated)
58:07 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
58:07 DEBUG   opendrift.models.basemodel:2050: ======================================================================
58:07 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.901838359571755
58:07 DEBUG   opendrift.models.basemodel:2066:               10.513855162050831 <- longitude -> 10.955484828142065
58:07 DEBUG   opendrift.models.basemodel:2071:               -41.2100091011238   <- z ->   -0.027501918024138178
58:07 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
58:07 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:07 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
58:07 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:07 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
58:07 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:07 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:07 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
58:07 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-23 06:00:00 (before)
                2024-06-23 07:00:00 (after)
58:07 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-23 06:00:00) in space  (linearNDFast)
58:07 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
58:07 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-23 07:00:00) in space  (linearNDFast)
58:07 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
58:07 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-23 06:00:00, weight 0.05) and
                      after (2024-06-23 07:00:00, weight 0.95) in time
58:07 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
58:07 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592879734 and -59.044526154230745 degrees.
58:07 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592879734 and -59.044526154230745 degrees.
58:07 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:07 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:07 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
58:07 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:07 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
58:07 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:07 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:07 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
58:07 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
58:07 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
58:07 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:07 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:07 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
58:07 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:07 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
58:07 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:07 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:07 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
58:07 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
58:07 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
58:07 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
58:07 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:07 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
58:07 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
58:07 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
58:07 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
58:07 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
58:07 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
58:07 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
58:07 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.264849 (min) 0.364556 (max)
58:07 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.0769927 (min) 0.564601 (max)
58:07 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
58:07 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: 3.12278 (min) 4.11215 (max)
58:07 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -4.06133 (min) -2.75263 (max)
58:07 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
58:07 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.9359 (min) 140.853 (max)
58:07 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
58:07 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 12.1948 (min) 15.0589 (max)
58:07 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 26.4785 (min) 33.7006 (max)
58:07 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000624818 (min) 0.00139602 (max)
58:07 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
58:07 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
58:07 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
58:07 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
58:07 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
58:07 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
58:07 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
58:07 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
58:07 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
58:07 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
58:07 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
58:07 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
58:07 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
58:07 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 2
58:07 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2]
58:07 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0]
58:07 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  521.    0.]
 [   0.    0.    0.    0.    0.]
 [ 208.    0.    0.  623.    0.]
 [  14.    0. 1018.    0.    0.]
 [   0.    0.    0.    0.    0.]]
58:07 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
58:07 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
58:07 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
58:07 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
58:07 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.023216309654817125
58:07 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
58:07 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
58:07 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
58:07 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:07 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:07 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:07 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:07 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:07 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:07 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:07 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:07 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:07 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:07 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:07 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:07 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:07 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:07 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:07 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:07 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 24
58:07 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
58:07 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 24 elements
58:07 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
58:07 INFO    opendrift.models.chemicaldrift:1861: partitioning: [150, 0, 255, 95, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
58:07 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
58:07 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
58:07 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
58:07 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:07 DEBUG   opendrift.models.basemodel:2041: ======================================================================
58:07 INFO    opendrift.models.basemodel:2042: 2024-06-23 07:26:45.968543 - step 82 of 96 - 500 active elements (0 deactivated)
58:07 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
58:07 DEBUG   opendrift.models.basemodel:2050: ======================================================================
58:07 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.905911055816745
58:07 DEBUG   opendrift.models.basemodel:2066:               10.51385516205083 <- longitude -> 10.953547327973887
58:07 DEBUG   opendrift.models.basemodel:2071:               -41.500649468606404   <- z ->   0.0
58:07 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
58:07 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:07 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
58:07 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:07 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
58:07 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:07 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:07 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
58:07 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-23 07:00:00 (before)
                2024-06-23 08:00:00 (after)
58:08 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
58:08 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
58:08 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
58:08 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
58:08 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
58:08 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_salinity']
58:08 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 72x50x7) for time after (2024-06-23 08:00:00)
58:08 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-23 07:00:00) in space  (linearNDFast)
58:08 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
58:08 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-23 08:00:00) in space  (linearNDFast)
58:08 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
58:08 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:08 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:08 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:08 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:08 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:08 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:08 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:08 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
58:08 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
58:08 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
58:08 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
58:08 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
58:08 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
58:08 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 4 elements, expanding data 1
58:08 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-23 07:00:00, weight 0.55) and
                      after (2024-06-23 08:00:00, weight 0.45) in time
58:08 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
58:08 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615593067373 and -59.046463663725135 degrees.
58:08 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615593067373 and -59.046463663725135 degrees.
58:08 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:08 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:08 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
58:08 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:08 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
58:08 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:08 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:08 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
58:08 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
58:08 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
58:08 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:08 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:08 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
58:08 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:08 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
58:08 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:08 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:08 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
58:08 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
58:08 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
58:08 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
58:08 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:08 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
58:08 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
58:08 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
58:08 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
58:08 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
58:08 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
58:08 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
58:08 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.243788 (min) 0.375325 (max)
58:08 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.0529411 (min) 0.512658 (max)
58:08 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
58:08 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: 3.40655 (min) 4.23486 (max)
58:08 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -3.65091 (min) -2.39867 (max)
58:08 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
58:08 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.9359 (min) 144.566 (max)
58:08 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
58:08 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 12.2198 (min) 15.1029 (max)
58:08 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 26.1363 (min) 33.6958 (max)
58:08 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000520539 (min) 0.00100704 (max)
58:08 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
58:08 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
58:08 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
58:08 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
58:08 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
58:08 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
58:08 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
58:08 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
58:08 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
58:08 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
58:08 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
58:08 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
58:08 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
58:08 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 8
58:08 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 0 0 2 2 2 2]
58:08 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 3 3 0 0 0 0]
58:08 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  524.    0.]
 [   0.    0.    0.    0.    0.]
 [ 213.    0.    0.  630.    0.]
 [  14.    0. 1042.    0.    0.]
 [   0.    0.    0.    0.    0.]]
58:08 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
58:08 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
58:08 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
58:08 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
58:08 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.022595295090019625
58:08 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
58:08 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
58:08 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
58:08 DEBUG   opendrift.models.oceandrift:618: 12 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:08 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:08 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:08 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:08 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:618: 13 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:08 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:08 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:08 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:08 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:08 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:08 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:08 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:08 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:08 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:08 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:08 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:08 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:08 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 12
58:08 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
58:08 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 12 elements
58:08 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
58:08 INFO    opendrift.models.chemicaldrift:1861: partitioning: [152, 0, 254, 94, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
58:08 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
58:08 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
58:08 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
58:08 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
58:08 DEBUG   opendrift.models.basemodel:2041: ======================================================================
58:08 INFO    opendrift.models.basemodel:2042: 2024-06-23 07:56:45.968543 - step 83 of 96 - 500 active elements (0 deactivated)
58:08 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
58:08 DEBUG   opendrift.models.basemodel:2050: ======================================================================
58:08 DEBUG   opendrift.models.basemodel:2061:               57.55687017680575 <- latitude  -> 57.91000271107208
58:08 DEBUG   opendrift.models.basemodel:2066:               10.51385516205083 <- longitude -> 10.95221045501377
58:08 DEBUG   opendrift.models.basemodel:2071:               -41.03636361010847   <- z ->   0.0
58:08 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
58:08 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:08 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
58:08 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:08 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
58:08 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:08 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:08 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
58:08 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-23 07:00:00 (before)
                2024-06-23 08:00:00 (after)
58:08 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-23 07:00:00) in space  (linearNDFast)
58:08 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
58:08 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-23 08:00:00) in space  (linearNDFast)
58:08 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
58:08 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-23 07:00:00, weight 0.05) and
                      after (2024-06-23 08:00:00, weight 0.95) in time
58:08 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
58:08 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615593067373 and -59.047800531167894 degrees.
58:08 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615593067373 and -59.047800531167894 degrees.
58:08 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:08 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:08 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
58:08 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:08 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
58:08 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:08 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:08 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
58:08 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
58:08 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
58:08 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:08 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:08 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
58:08 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:08 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
58:08 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:08 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:08 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
58:08 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
58:08 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
58:08 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
58:08 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:08 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
58:08 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
58:08 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
58:08 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
58:08 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
58:08 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
58:08 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
58:08 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.220252 (min) 0.390525 (max)
58:08 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.0527571 (min) 0.515637 (max)
58:08 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
58:08 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: 3.61835 (min) 4.63116 (max)
58:08 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -3.8432 (min) -1.61768 (max)
58:08 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
58:08 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.9359 (min) 148.497 (max)
58:08 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
58:08 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 12.1335 (min) 15.1179 (max)
58:08 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 26.1665 (min) 33.6891 (max)
58:08 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000585193 (min) 0.0013394 (max)
58:08 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
58:08 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
58:08 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
58:08 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
58:08 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
58:08 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
58:08 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
58:08 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
58:08 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
58:08 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
58:08 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
58:08 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
58:08 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
58:08 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 3
58:08 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 0]
58:08 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 3]
58:08 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  525.    0.]
 [   0.    0.    0.    0.    0.]
 [ 215.    0.    0.  638.    0.]
 [  14.    0. 1054.    0.    0.]
 [   0.    0.    0.    0.    0.]]
58:08 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
58:08 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
58:08 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
58:08 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
58:08 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.026175691082200272
58:08 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
58:08 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
58:08 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
58:08 DEBUG   opendrift.models.oceandrift:618: 11 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:08 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:08 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:08 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:08 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:08 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:08 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:08 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:08 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:08 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:08 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 5
58:08 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
58:08 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 5 elements
58:08 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
58:08 INFO    opendrift.models.chemicaldrift:1861: partitioning: [153, 0, 253, 94, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
58:08 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
58:08 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
58:08 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
58:08 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:08 DEBUG   opendrift.models.basemodel:2041: ======================================================================
58:08 INFO    opendrift.models.basemodel:2042: 2024-06-23 08:26:45.968543 - step 84 of 96 - 500 active elements (0 deactivated)
58:08 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
58:08 DEBUG   opendrift.models.basemodel:2050: ======================================================================
58:08 DEBUG   opendrift.models.basemodel:2061:               57.55687017680575 <- latitude  -> 57.914575517723165
58:08 DEBUG   opendrift.models.basemodel:2066:               10.51385516205083 <- longitude -> 10.95056986495941
58:08 DEBUG   opendrift.models.basemodel:2071:               -40.739864514011174   <- z ->   -0.1776177243982484
58:08 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
58:08 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:08 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
58:08 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:08 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
58:08 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:08 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:08 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
58:08 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-23 08:00:00 (before)
                2024-06-23 09:00:00 (after)
58:10 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
58:10 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
58:10 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
58:10 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
58:10 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
58:10 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_salinity']
58:10 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 73x50x7) for time after (2024-06-23 09:00:00)
58:10 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-23 08:00:00) in space  (linearNDFast)
58:10 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
58:10 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-23 09:00:00) in space  (linearNDFast)
58:10 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 7 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 7 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 7 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 7 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 7 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 7 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 7 elements, expanding data 1
58:10 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-23 08:00:00, weight 0.55) and
                      after (2024-06-23 09:00:00, weight 0.45) in time
58:10 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
58:10 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615593067373 and -59.04944112169882 degrees.
58:10 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615593067373 and -59.04944112169882 degrees.
58:10 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:10 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:10 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
58:10 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:10 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
58:10 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:10 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:10 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
58:10 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
58:10 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
58:10 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:10 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:10 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
58:10 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:10 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
58:10 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:10 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:10 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
58:10 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
58:10 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
58:10 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
58:10 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:10 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
58:10 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
58:10 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
58:10 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
58:10 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
58:10 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
58:10 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
58:10 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.212615 (min) 0.329276 (max)
58:10 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.0664167 (min) 0.498977 (max)
58:10 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
58:10 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: 3.4646 (min) 4.64001 (max)
58:10 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -3.29842 (min) -1.13286 (max)
58:10 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
58:10 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.9359 (min) 153.015 (max)
58:10 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
58:10 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 12.0072 (min) 15.1487 (max)
58:10 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 25.9872 (min) 33.6917 (max)
58:10 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000491717 (min) 0.00117828 (max)
58:10 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
58:10 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
58:10 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
58:10 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
58:10 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
58:10 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
58:10 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
58:10 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
58:10 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
58:10 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
58:10 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
58:10 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
58:10 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
58:10 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 3
58:10 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 2]
58:10 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 0]
58:10 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  526.    0.]
 [   0.    0.    0.    0.    0.]
 [ 217.    0.    0.  642.    0.]
 [  14.    0. 1059.    0.    0.]
 [   0.    0.    0.    0.    0.]]
58:10 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
58:10 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
58:10 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
58:10 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
58:10 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.020065607430693615
58:10 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
58:10 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
58:10 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
58:10 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:10 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:10 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:10 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 1
58:10 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
58:10 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 1 elements
58:10 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
58:10 INFO    opendrift.models.chemicaldrift:1861: partitioning: [154, 0, 251, 95, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
58:10 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
58:10 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
58:10 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
58:10 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:10 DEBUG   opendrift.models.basemodel:2041: ======================================================================
58:10 INFO    opendrift.models.basemodel:2042: 2024-06-23 08:56:45.968543 - step 85 of 96 - 500 active elements (0 deactivated)
58:10 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
58:10 DEBUG   opendrift.models.basemodel:2050: ======================================================================
58:10 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.91942488486405
58:10 DEBUG   opendrift.models.basemodel:2066:               10.513855162050831 <- longitude -> 10.948777022848223
58:10 DEBUG   opendrift.models.basemodel:2071:               -41.13897704104272   <- z ->   0.0
58:10 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
58:10 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:10 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
58:10 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:10 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
58:10 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:10 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:10 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
58:10 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-23 08:00:00 (before)
                2024-06-23 09:00:00 (after)
58:10 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-23 08:00:00) in space  (linearNDFast)
58:10 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:10 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-23 09:00:00) in space  (linearNDFast)
58:10 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:10 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:10 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-23 08:00:00, weight 0.05) and
                      after (2024-06-23 09:00:00, weight 0.95) in time
58:10 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
58:10 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592879734 and -59.05123396359163 degrees.
58:10 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592879734 and -59.05123396359163 degrees.
58:10 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:10 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:10 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
58:10 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:10 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
58:10 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:10 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:10 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
58:10 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
58:10 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
58:10 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:10 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:10 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
58:10 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:10 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
58:10 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:10 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:10 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
58:10 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
58:10 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
58:10 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
58:10 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:10 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
58:10 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
58:10 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
58:10 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
58:10 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
58:10 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
58:10 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
58:10 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.194633 (min) 0.361193 (max)
58:10 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.0947177 (min) 0.510281 (max)
58:10 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
58:10 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: 3.00037 (min) 5.25528 (max)
58:10 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -2.65868 (min) -0.517246 (max)
58:10 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
58:10 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.9359 (min) 157.799 (max)
58:10 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
58:10 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 11.9619 (min) 15.1676 (max)
58:10 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 26.1432 (min) 33.7122 (max)
58:10 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000495383 (min) 0.00141068 (max)
58:10 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
58:10 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
58:10 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
58:10 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
58:10 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
58:10 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
58:10 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
58:10 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
58:10 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
58:10 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
58:10 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
58:10 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
58:10 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
58:10 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 1
58:10 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2]
58:10 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0]
58:10 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  526.    0.]
 [   0.    0.    0.    0.    0.]
 [ 218.    0.    0.  643.    0.]
 [  14.    0. 1060.    0.    0.]
 [   0.    0.    0.    0.    0.]]
58:10 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
58:10 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
58:10 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
58:10 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
58:10 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.023131335069194955
58:10 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
58:10 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
58:10 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
58:10 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:10 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:10 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:10 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:10 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:10 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:10 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
58:10 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:10 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 3
58:10 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
58:10 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 3 elements
58:10 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
58:10 INFO    opendrift.models.chemicaldrift:1861: partitioning: [155, 0, 250, 95, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
58:10 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
58:10 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
58:10 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
58:10 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:10 DEBUG   opendrift.models.basemodel:2041: ======================================================================
58:10 INFO    opendrift.models.basemodel:2042: 2024-06-23 09:26:45.968543 - step 86 of 96 - 500 active elements (0 deactivated)
58:10 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
58:10 DEBUG   opendrift.models.basemodel:2050: ======================================================================
58:10 DEBUG   opendrift.models.basemodel:2061:               57.55687017680575 <- latitude  -> 57.9240747015465
58:10 DEBUG   opendrift.models.basemodel:2066:               10.513855162050831 <- longitude -> 10.946964619207813
58:10 DEBUG   opendrift.models.basemodel:2071:               -41.46687017629418   <- z ->   0.0
58:10 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
58:10 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:10 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
58:10 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:10 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
58:10 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:10 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:10 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
58:10 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-23 09:00:00 (before)
                2024-06-23 10:00:00 (after)
58:11 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
58:11 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
58:11 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
58:11 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
58:11 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
58:11 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_salinity']
58:11 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 75x50x7) for time after (2024-06-23 10:00:00)
58:11 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-23 09:00:00) in space  (linearNDFast)
58:11 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
58:11 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-23 10:00:00) in space  (linearNDFast)
58:11 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
58:11 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:11 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:11 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:11 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:11 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:11 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:11 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:11 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:11 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:11 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:11 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:11 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:11 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:11 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:11 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:11 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:11 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:11 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:11 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:11 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:11 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:11 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:11 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:11 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
58:11 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
58:11 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
58:11 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
58:11 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
58:11 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
58:11 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
58:11 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:11 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:11 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:11 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:11 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:11 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:11 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:11 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-23 09:00:00, weight 0.55) and
                      after (2024-06-23 10:00:00, weight 0.45) in time
58:11 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
58:12 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592879734 and -59.05304637334888 degrees.
58:12 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615592879734 and -59.05304637334888 degrees.
58:12 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:12 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:12 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
58:12 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:12 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
58:12 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:12 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:12 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
58:12 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
58:12 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
58:12 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:12 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:12 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
58:12 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:12 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
58:12 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:12 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:12 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
58:12 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
58:12 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
58:12 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
58:12 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:12 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
58:12 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
58:12 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
58:12 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
58:12 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
58:12 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
58:12 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
58:12 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.147778 (min) 0.319991 (max)
58:12 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.114249 (min) 0.514297 (max)
58:12 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
58:12 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: 3.25416 (min) 5.25005 (max)
58:12 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -2.36621 (min) 0.0980863 (max)
58:12 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
58:12 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.9359 (min) 162.301 (max)
58:12 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
58:12 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 11.8022 (min) 15.2281 (max)
58:12 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 25.6423 (min) 33.7551 (max)
58:12 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000435551 (min) 0.00116991 (max)
58:12 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
58:12 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
58:12 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
58:12 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
58:12 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
58:12 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
58:12 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
58:12 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
58:12 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
58:12 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
58:12 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
58:12 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
58:12 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
58:12 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 2
58:12 DEBUG   opendrift.models.chemicaldrift:1452: old species: [0 0]
58:12 DEBUG   opendrift.models.chemicaldrift:1453: new species: [3 3]
58:12 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  528.    0.]
 [   0.    0.    0.    0.    0.]
 [ 218.    0.    0.  646.    0.]
 [  14.    0. 1063.    0.    0.]
 [   0.    0.    0.    0.    0.]]
58:12 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
58:12 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
58:12 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
58:12 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
58:12 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.02231102440378404
58:12 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
58:12 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
58:12 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
58:12 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:12 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:12 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:12 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:12 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:12 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:12 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:12 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:12 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 6
58:12 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
58:12 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 6 elements
58:12 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
58:12 INFO    opendrift.models.chemicaldrift:1861: partitioning: [153, 0, 252, 95, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
58:12 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
58:12 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
58:12 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
58:12 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
58:12 DEBUG   opendrift.models.basemodel:2041: ======================================================================
58:12 INFO    opendrift.models.basemodel:2042: 2024-06-23 09:56:45.968543 - step 87 of 96 - 500 active elements (0 deactivated)
58:12 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
58:12 DEBUG   opendrift.models.basemodel:2050: ======================================================================
58:12 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.92838935630517
58:12 DEBUG   opendrift.models.basemodel:2066:               10.51385516205083 <- longitude -> 10.944959311458298
58:12 DEBUG   opendrift.models.basemodel:2071:               -41.629661323692105   <- z ->   -0.05333090115428163
58:12 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
58:12 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:12 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
58:12 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:12 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
58:12 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:12 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:12 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
58:12 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-23 09:00:00 (before)
                2024-06-23 10:00:00 (after)
58:12 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-23 09:00:00) in space  (linearNDFast)
58:12 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
58:12 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-23 10:00:00) in space  (linearNDFast)
58:12 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
58:12 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-23 09:00:00, weight 0.05) and
                      after (2024-06-23 10:00:00, weight 0.95) in time
58:12 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
58:12 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615593067373 and -59.05505166286186 degrees.
58:12 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615593067373 and -59.05505166286186 degrees.
58:12 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:12 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:12 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
58:12 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:12 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
58:12 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:12 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:12 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
58:12 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
58:12 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
58:12 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:12 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:12 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
58:12 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:12 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
58:12 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:12 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:12 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
58:12 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
58:12 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
58:12 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
58:12 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:12 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
58:12 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
58:12 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
58:12 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
58:12 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
58:12 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
58:12 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
58:12 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.135007 (min) 0.336731 (max)
58:12 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.131897 (min) 0.482191 (max)
58:12 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
58:12 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: 3.50263 (min) 5.60301 (max)
58:12 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -2.31902 (min) 0.711108 (max)
58:12 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
58:12 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.9359 (min) 166.338 (max)
58:12 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
58:12 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 11.687 (min) 15.284 (max)
58:12 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 25.6468 (min) 33.8027 (max)
58:12 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000413922 (min) 0.00116252 (max)
58:12 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
58:12 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
58:12 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
58:12 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
58:12 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
58:12 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
58:12 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
58:12 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
58:12 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
58:12 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
58:12 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
58:12 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
58:12 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
58:12 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 5
58:12 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 2 3 2]
58:12 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 0 0 0]
58:12 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  528.    0.]
 [   0.    0.    0.    0.    0.]
 [ 222.    0.    0.  650.    0.]
 [  15.    0. 1069.    0.    0.]
 [   0.    0.    0.    0.    0.]]
58:12 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
58:12 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
58:12 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
58:12 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
58:12 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.023585272490061406
58:12 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
58:12 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
58:12 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
58:12 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:12 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:12 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:12 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:12 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 1
58:12 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
58:12 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 1 elements
58:12 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
58:12 INFO    opendrift.models.chemicaldrift:1861: partitioning: [158, 0, 248, 94, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
58:12 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
58:12 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
58:12 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
58:12 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
58:12 DEBUG   opendrift.models.basemodel:2041: ======================================================================
58:12 INFO    opendrift.models.basemodel:2042: 2024-06-23 10:26:45.968543 - step 88 of 96 - 500 active elements (0 deactivated)
58:12 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
58:12 DEBUG   opendrift.models.basemodel:2050: ======================================================================
58:12 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.934390596232824
58:12 DEBUG   opendrift.models.basemodel:2066:               10.51385516205083 <- longitude -> 10.942709191190684
58:12 DEBUG   opendrift.models.basemodel:2071:               -41.95943682998441   <- z ->   0.0
58:12 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
58:12 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:12 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
58:12 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:12 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
58:12 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:12 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:12 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
58:12 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-23 10:00:00 (before)
                2024-06-23 11:00:00 (after)
58:13 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
58:13 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
58:13 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
58:13 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
58:13 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
58:13 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_salinity']
58:13 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 76x50x7) for time after (2024-06-23 11:00:00)
58:13 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-23 10:00:00) in space  (linearNDFast)
58:13 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
58:13 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-23 11:00:00) in space  (linearNDFast)
58:13 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
58:13 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:13 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:13 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:13 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:13 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:13 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:13 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:13 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:13 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:13 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:13 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:13 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:13 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:13 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:13 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:13 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:13 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:13 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:13 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:13 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:13 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:13 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:13 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:13 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
58:13 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
58:13 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
58:13 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
58:13 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
58:13 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
58:13 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 6 elements, expanding data 1
58:13 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:13 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:13 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:13 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:13 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:13 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:13 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:13 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-23 10:00:00, weight 0.55) and
                      after (2024-06-23 11:00:00, weight 0.45) in time
58:13 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
58:13 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615593067373 and -59.05730179745519 degrees.
58:13 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615593067373 and -59.05730179745519 degrees.
58:13 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:13 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:13 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
58:13 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:13 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
58:13 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:13 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:13 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
58:13 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
58:13 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
58:13 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:13 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:13 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
58:13 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:13 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
58:13 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:13 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:13 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
58:13 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
58:13 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
58:13 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
58:13 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:13 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
58:13 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
58:13 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
58:13 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
58:13 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
58:13 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
58:13 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
58:13 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.123327 (min) 0.340859 (max)
58:13 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.113656 (min) 0.519655 (max)
58:13 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
58:13 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: 3.57834 (min) 5.82607 (max)
58:13 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -2.37161 (min) 0.739892 (max)
58:13 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
58:13 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.9359 (min) 170.463 (max)
58:13 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
58:13 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 11.5811 (min) 15.3556 (max)
58:13 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 25.1109 (min) 33.8031 (max)
58:13 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.00044613 (min) 0.00113361 (max)
58:13 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
58:13 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
58:13 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
58:13 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
58:13 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
58:13 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
58:13 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
58:13 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
58:13 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
58:13 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
58:13 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
58:13 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
58:13 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
58:13 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 5
58:13 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 2 2 2]
58:13 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 0 0 0]
58:13 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  528.    0.]
 [   0.    0.    0.    0.    0.]
 [ 227.    0.    0.  651.    0.]
 [  15.    0. 1070.    0.    0.]
 [   0.    0.    0.    0.    0.]]
58:13 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
58:13 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
58:13 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
58:13 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
58:13 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.02519110998670473
58:13 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
58:13 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
58:13 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
58:13 DEBUG   opendrift.models.oceandrift:618: 1 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:13 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:13 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:618: 1 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:13 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:13 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:13 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:13 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:13 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:13 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
58:13 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
58:13 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 5
58:13 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
58:13 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 5 elements
58:13 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
58:13 INFO    opendrift.models.chemicaldrift:1861: partitioning: [163, 0, 242, 95, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
58:13 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
58:13 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
58:13 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
58:13 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
58:13 DEBUG   opendrift.models.basemodel:2041: ======================================================================
58:13 INFO    opendrift.models.basemodel:2042: 2024-06-23 10:56:45.968543 - step 89 of 96 - 500 active elements (0 deactivated)
58:13 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
58:13 DEBUG   opendrift.models.basemodel:2050: ======================================================================
58:13 DEBUG   opendrift.models.basemodel:2061:               57.55687017680575 <- latitude  -> 57.94027128365833
58:13 DEBUG   opendrift.models.basemodel:2066:               10.513855162050827 <- longitude -> 10.940296797641116
58:13 DEBUG   opendrift.models.basemodel:2071:               -42.544180039377586   <- z ->   -0.02641556170737691
58:13 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
58:13 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:13 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
58:13 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:13 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
58:13 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:13 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:13 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
58:13 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-23 10:00:00 (before)
                2024-06-23 11:00:00 (after)
58:13 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-23 10:00:00) in space  (linearNDFast)
58:13 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
58:13 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-23 11:00:00) in space  (linearNDFast)
58:13 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
58:13 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-23 10:00:00, weight 0.05) and
                      after (2024-06-23 11:00:00, weight 0.95) in time
58:13 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
58:13 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615593067373 and -59.059714191949496 degrees.
58:13 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615593067373 and -59.059714191949496 degrees.
58:13 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:13 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:13 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
58:13 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:13 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
58:13 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:13 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:13 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
58:13 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
58:13 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
58:13 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:13 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:13 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
58:13 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:13 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
58:13 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:13 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:13 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
58:13 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
58:13 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
58:13 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
58:13 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:13 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
58:13 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
58:13 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
58:13 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
58:13 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
58:13 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
58:13 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
58:13 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.141342 (min) 0.36657 (max)
58:13 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.0917188 (min) 0.517038 (max)
58:13 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
58:13 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: 3.5645 (min) 6.03144 (max)
58:13 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -2.43794 (min) 1.16572 (max)
58:13 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
58:13 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.9359 (min) 174.988 (max)
58:13 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
58:13 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 11.4705 (min) 15.4003 (max)
58:13 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 25.6435 (min) 33.851 (max)
58:13 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000471225 (min) 0.00113334 (max)
58:13 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
58:13 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
58:13 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
58:13 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
58:13 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
58:13 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
58:13 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
58:13 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
58:13 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
58:13 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
58:13 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
58:13 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
58:13 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
58:13 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 3
58:13 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0 0]
58:13 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3 3]
58:13 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  530.    0.]
 [   0.    0.    0.    0.    0.]
 [ 228.    0.    0.  657.    0.]
 [  15.    0. 1075.    0.    0.]
 [   0.    0.    0.    0.    0.]]
58:13 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
58:13 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
58:13 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
58:13 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
58:13 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.02673080259370062
58:13 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
58:13 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
58:13 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
58:13 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:13 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:13 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:13 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:13 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:13 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:13 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
58:13 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:13 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 4
58:13 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
58:13 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 4 elements
58:13 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
58:13 INFO    opendrift.models.chemicaldrift:1861: partitioning: [162, 0, 242, 96, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
58:13 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
58:13 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
58:13 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
58:13 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
58:13 DEBUG   opendrift.models.basemodel:2041: ======================================================================
58:13 INFO    opendrift.models.basemodel:2042: 2024-06-23 11:26:45.968543 - step 90 of 96 - 500 active elements (0 deactivated)
58:13 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
58:13 DEBUG   opendrift.models.basemodel:2050: ======================================================================
58:13 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.94574512076383
58:13 DEBUG   opendrift.models.basemodel:2066:               10.51385516205083 <- longitude -> 10.937731346253166
58:13 DEBUG   opendrift.models.basemodel:2071:               -42.92990709368712   <- z ->   0.0
58:13 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
58:13 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:13 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
58:13 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:13 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
58:13 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:13 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:13 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
58:13 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-23 11:00:00 (before)
                2024-06-23 12:00:00 (after)
58:15 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
58:15 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
58:15 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
58:15 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
58:15 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
58:15 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_salinity']
58:15 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 78x49x7) for time after (2024-06-23 12:00:00)
58:15 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-23 11:00:00) in space  (linearNDFast)
58:15 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
58:15 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-23 12:00:00) in space  (linearNDFast)
58:15 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
58:15 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:15 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:15 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:15 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:15 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:15 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:15 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:15 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:15 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:15 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:15 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:15 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:15 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:15 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:15 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:15 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:15 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:15 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:15 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:15 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:15 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:15 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:15 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:15 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:15 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:15 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:15 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:15 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:15 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:15 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:15 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:15 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:15 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:15 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:15 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:15 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:15 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:15 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-23 11:00:00, weight 0.55) and
                      after (2024-06-23 12:00:00, weight 0.45) in time
58:15 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
58:15 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615593067373 and -59.062279637758024 degrees.
58:15 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615593067373 and -59.062279637758024 degrees.
58:15 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:15 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:15 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
58:15 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:15 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
58:15 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:15 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:15 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
58:15 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
58:15 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
58:15 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:15 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:15 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
58:15 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:15 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
58:15 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:15 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:15 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
58:15 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
58:15 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
58:15 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
58:15 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:15 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
58:15 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
58:15 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
58:15 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
58:15 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
58:15 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
58:15 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
58:15 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.112175 (min) 0.404761 (max)
58:15 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.115077 (min) 0.476386 (max)
58:15 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
58:15 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: 3.83848 (min) 6.50766 (max)
58:15 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -2.4855 (min) 1.29821 (max)
58:15 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
58:15 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.9359 (min) 179.882 (max)
58:15 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
58:15 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 11.3904 (min) 15.4514 (max)
58:15 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 25.6686 (min) 33.8635 (max)
58:15 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000289145 (min) 0.00091193 (max)
58:15 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
58:15 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
58:15 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
58:15 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
58:15 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
58:15 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
58:15 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
58:15 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
58:15 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:15 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
58:15 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
58:15 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
58:15 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
58:15 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 2
58:15 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 0]
58:15 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 3]
58:15 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  531.    0.]
 [   0.    0.    0.    0.    0.]
 [ 229.    0.    0.  660.    0.]
 [  15.    0. 1079.    0.    0.]
 [   0.    0.    0.    0.    0.]]
58:15 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
58:15 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
58:15 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
58:15 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
58:15 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.03061761759829994
58:15 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
58:15 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
58:15 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
58:15 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:618: 1 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:618: 1 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:618: 1 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:15 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:15 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:15 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:15 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:618: 14 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:15 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 1
58:15 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
58:15 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 1 elements
58:15 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
58:15 INFO    opendrift.models.chemicaldrift:1861: partitioning: [162, 0, 240, 98, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
58:15 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
58:15 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
58:15 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
58:15 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
58:15 DEBUG   opendrift.models.basemodel:2041: ======================================================================
58:15 INFO    opendrift.models.basemodel:2042: 2024-06-23 11:56:45.968543 - step 91 of 96 - 500 active elements (0 deactivated)
58:15 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
58:15 DEBUG   opendrift.models.basemodel:2050: ======================================================================
58:15 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.950419867509204
58:15 DEBUG   opendrift.models.basemodel:2066:               10.51385516205083 <- longitude -> 10.93585347277862
58:15 DEBUG   opendrift.models.basemodel:2071:               -43.45996837895055   <- z ->   0.0
58:15 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
58:15 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:15 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
58:15 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:15 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
58:15 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:15 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:15 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
58:15 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-23 11:00:00 (before)
                2024-06-23 12:00:00 (after)
58:15 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-23 11:00:00) in space  (linearNDFast)
58:15 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
58:15 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-23 12:00:00) in space  (linearNDFast)
58:15 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
58:15 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-23 11:00:00, weight 0.05) and
                      after (2024-06-23 12:00:00, weight 0.95) in time
58:15 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
58:15 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615593067373 and -59.06415750096651 degrees.
58:15 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615593067373 and -59.06415750096651 degrees.
58:15 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:15 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:15 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
58:15 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:15 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
58:15 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:15 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:15 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
58:15 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
58:15 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
58:15 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:15 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:15 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
58:15 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:15 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
58:15 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:15 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:15 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
58:15 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
58:15 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
58:15 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
58:15 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:15 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
58:15 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
58:15 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
58:15 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
58:15 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
58:15 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
58:15 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
58:15 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.0839916 (min) 0.477165 (max)
58:15 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.137634 (min) 0.446014 (max)
58:15 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
58:15 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: 3.88558 (min) 7.06456 (max)
58:15 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -2.58506 (min) 1.46899 (max)
58:15 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
58:15 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.9359 (min) 183.823 (max)
58:15 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
58:15 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 11.3172 (min) 15.5289 (max)
58:15 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 25.688 (min) 33.8497 (max)
58:15 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000531563 (min) 0.000866426 (max)
58:15 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
58:15 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
58:15 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
58:15 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
58:15 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
58:15 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
58:15 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
58:15 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
58:15 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
58:15 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
58:15 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
58:15 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
58:15 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
58:15 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 5
58:15 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 2 3 2]
58:15 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 0 0 0]
58:15 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  531.    0.]
 [   0.    0.    0.    0.    0.]
 [ 233.    0.    0.  662.    0.]
 [  16.    0. 1080.    0.    0.]
 [   0.    0.    0.    0.    0.]]
58:15 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
58:15 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
58:15 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
58:15 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
58:15 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.03607962749220918
58:15 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
58:15 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
58:15 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
58:15 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:15 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:15 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:618: 1 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:15 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:15 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:15 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:15 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 1
58:15 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
58:15 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 1 elements
58:15 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
58:15 INFO    opendrift.models.chemicaldrift:1861: partitioning: [167, 0, 235, 98, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
58:15 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
58:15 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
58:15 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
58:15 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
58:15 DEBUG   opendrift.models.basemodel:2041: ======================================================================
58:15 INFO    opendrift.models.basemodel:2042: 2024-06-23 12:26:45.968543 - step 92 of 96 - 500 active elements (0 deactivated)
58:15 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
58:15 DEBUG   opendrift.models.basemodel:2050: ======================================================================
58:15 DEBUG   opendrift.models.basemodel:2061:               57.55687017680575 <- latitude  -> 57.954290305046634
58:15 DEBUG   opendrift.models.basemodel:2066:               10.51385516205083 <- longitude -> 10.944565704395607
58:15 DEBUG   opendrift.models.basemodel:2071:               -44.08081109504239   <- z ->   0.0
58:15 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
58:15 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:15 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
58:15 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:15 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
58:15 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:15 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:15 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
58:15 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-23 12:00:00 (before)
                2024-06-23 13:00:00 (after)
58:21 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
58:21 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
58:21 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
58:21 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
58:21 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
58:21 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_salinity']
58:21 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 79x50x7) for time after (2024-06-23 13:00:00)
58:21 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-23 12:00:00) in space  (linearNDFast)
58:21 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
58:21 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-23 13:00:00) in space  (linearNDFast)
58:21 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
58:21 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:21 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:21 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:21 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:21 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:21 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:21 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 2 elements, expanding data 1
58:21 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-23 12:00:00, weight 0.55) and
                      after (2024-06-23 13:00:00, weight 0.45) in time
58:21 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
58:21 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615593067373 and -59.05544528230525 degrees.
58:21 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615593067373 and -59.05544528230525 degrees.
58:21 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:21 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:21 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
58:21 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:21 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
58:21 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:21 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:21 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
58:21 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
58:21 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
58:21 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:21 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:21 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
58:21 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:21 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
58:21 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:21 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:21 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
58:21 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
58:21 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
58:21 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
58:21 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:21 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
58:21 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
58:21 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
58:21 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
58:21 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
58:21 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
58:21 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
58:21 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.0835944 (min) 0.507393 (max)
58:21 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.219967 (min) 0.393935 (max)
58:21 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
58:21 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: 4.34602 (min) 7.38213 (max)
58:21 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -2.15209 (min) 1.73184 (max)
58:21 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
58:21 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.9359 (min) 186.33 (max)
58:21 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
58:21 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 11.2496 (min) 15.5602 (max)
58:21 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 25.8518 (min) 33.8352 (max)
58:21 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000482982 (min) 0.000729912 (max)
58:21 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
58:21 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
58:21 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
58:21 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
58:21 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
58:21 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
58:21 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
58:21 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
58:21 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
58:21 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
58:21 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
58:21 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
58:21 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
58:21 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 1
58:21 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2]
58:21 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0]
58:21 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  531.    0.]
 [   0.    0.    0.    0.    0.]
 [ 234.    0.    0.  664.    0.]
 [  16.    0. 1081.    0.    0.]
 [   0.    0.    0.    0.    0.]]
58:21 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
58:21 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
58:21 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
58:21 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
58:21 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.03951628090041847
58:21 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
58:21 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
58:21 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
58:21 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:618: 1 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:618: 1 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:618: 1 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:21 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:21 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:21 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 0
58:21 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
58:21 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
58:21 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
58:21 INFO    opendrift.models.chemicaldrift:1861: partitioning: [168, 0, 233, 99, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
58:21 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
58:21 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
58:21 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
58:21 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
58:21 DEBUG   opendrift.models.basemodel:2041: ======================================================================
58:21 INFO    opendrift.models.basemodel:2042: 2024-06-23 12:56:45.968543 - step 93 of 96 - 500 active elements (0 deactivated)
58:21 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
58:21 DEBUG   opendrift.models.basemodel:2050: ======================================================================
58:21 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.957814588870384
58:21 DEBUG   opendrift.models.basemodel:2066:               10.51385516205083 <- longitude -> 10.95764624224157
58:21 DEBUG   opendrift.models.basemodel:2071:               -44.38908435006556   <- z ->   0.0
58:21 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
58:21 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:21 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
58:21 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:21 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
58:21 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:21 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:21 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
58:21 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-23 12:00:00 (before)
                2024-06-23 13:00:00 (after)
58:21 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-23 12:00:00) in space  (linearNDFast)
58:21 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
58:21 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-23 13:00:00) in space  (linearNDFast)
58:21 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
58:21 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:21 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:21 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:21 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:21 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:21 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:21 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:21 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:21 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:21 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:21 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:21 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:21 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:21 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:21 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:21 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:21 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:21 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:21 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:21 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:21 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:21 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:21 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:21 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:21 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:21 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:21 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:21 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:21 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:21 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:21 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-23 12:00:00, weight 0.05) and
                      after (2024-06-23 13:00:00, weight 0.95) in time
58:21 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
58:21 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615593067373 and -59.04236474419779 degrees.
58:21 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615593067373 and -59.04236474419779 degrees.
58:21 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:21 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:21 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
58:21 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:21 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
58:21 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:21 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:21 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
58:21 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
58:21 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
58:21 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:21 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:21 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
58:21 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:21 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
58:21 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:21 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:21 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
58:21 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
58:21 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
58:21 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
58:21 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:21 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
58:21 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
58:21 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
58:21 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
58:21 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
58:21 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
58:21 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
58:21 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.0880509 (min) 0.523471 (max)
58:21 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.280842 (min) 0.374298 (max)
58:21 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
58:21 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: 4.86698 (min) 7.69257 (max)
58:21 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -1.67291 (min) 2.07367 (max)
58:21 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
58:21 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.9359 (min) 188.907 (max)
58:21 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
58:21 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 11.1845 (min) 15.6093 (max)
58:21 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 25.0687 (min) 33.8269 (max)
58:21 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000575722 (min) 0.000676881 (max)
58:21 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
58:21 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
58:21 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
58:21 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
58:21 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
58:21 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
58:21 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
58:21 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
58:21 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
58:21 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
58:21 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
58:21 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
58:21 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
58:21 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 4
58:21 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 0 0]
58:21 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 3 3]
58:21 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[   0.    0.    0.  533.    0.]
 [   0.    0.    0.    0.    0.]
 [ 236.    0.    0.  665.    0.]
 [  16.    0. 1081.    0.    0.]
 [   0.    0.    0.    0.    0.]]
58:21 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
58:21 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
58:21 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
58:21 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
58:21 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.04333083096700207
58:21 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
58:21 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
58:21 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
58:21 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:618: 1 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:618: 1 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:21 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:21 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:21 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:21 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:21 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:21 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:21 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:21 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 4
58:21 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
58:21 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 4 elements
58:21 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
58:21 INFO    opendrift.models.chemicaldrift:1861: partitioning: [168, 0, 232, 100, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
58:21 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
58:21 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
58:21 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
58:21 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
58:21 DEBUG   opendrift.models.basemodel:2041: ======================================================================
58:21 INFO    opendrift.models.basemodel:2042: 2024-06-23 13:26:45.968543 - step 94 of 96 - 500 active elements (0 deactivated)
58:21 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
58:21 DEBUG   opendrift.models.basemodel:2050: ======================================================================
58:21 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.96125736647115
58:21 DEBUG   opendrift.models.basemodel:2066:               10.51385516205083 <- longitude -> 10.971501132430056
58:21 DEBUG   opendrift.models.basemodel:2071:               -45.138885223464484   <- z ->   0.0
58:21 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
58:21 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:21 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
58:21 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:21 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
58:21 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:21 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:21 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
58:21 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-23 13:00:00 (before)
                2024-06-23 14:00:00 (after)
58:23 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
58:23 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
58:23 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
58:23 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
58:23 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
58:23 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_salinity']
58:23 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 81x51x7) for time after (2024-06-23 14:00:00)
58:23 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-23 13:00:00) in space  (linearNDFast)
58:23 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
58:23 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-23 14:00:00) in space  (linearNDFast)
58:23 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
58:23 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
58:23 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
58:23 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
58:23 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
58:23 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
58:23 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
58:23 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 3 elements, expanding data 1
58:23 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-23 13:00:00, weight 0.55) and
                      after (2024-06-23 14:00:00, weight 0.45) in time
58:23 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
58:23 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615593067373 and -59.028509841260124 degrees.
58:23 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615593067373 and -59.028509841260124 degrees.
58:23 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:23 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:23 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
58:23 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:23 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
58:23 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:23 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:23 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
58:23 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
58:23 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
58:23 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:23 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:23 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
58:23 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:23 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
58:23 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:23 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:23 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
58:23 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
58:23 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
58:23 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
58:23 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:23 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
58:23 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
58:23 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
58:23 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
58:23 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
58:23 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
58:23 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
58:23 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.131959 (min) 0.55424 (max)
58:23 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.216412 (min) 0.38235 (max)
58:23 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
58:23 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: 5.42042 (min) 8.0925 (max)
58:23 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -0.975729 (min) 2.54732 (max)
58:23 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
58:23 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.9359 (min) 190.673 (max)
58:23 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
58:23 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 11.1143 (min) 15.6924 (max)
58:23 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 25.7704 (min) 33.8565 (max)
58:23 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.000867033 (min) 0.00100675 (max)
58:23 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
58:23 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
58:23 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
58:23 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
58:23 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
58:23 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
58:23 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
58:23 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
58:23 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
58:23 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
58:23 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
58:23 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
58:23 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
58:23 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 3
58:23 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 0]
58:23 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 2]
58:23 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[0.000e+00 0.000e+00 1.000e+00 5.330e+02 0.000e+00]
 [0.000e+00 0.000e+00 0.000e+00 0.000e+00 0.000e+00]
 [2.380e+02 0.000e+00 0.000e+00 6.680e+02 0.000e+00]
 [1.600e+01 0.000e+00 1.085e+03 0.000e+00 0.000e+00]
 [0.000e+00 0.000e+00 0.000e+00 0.000e+00 0.000e+00]]
58:23 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 1 elements
58:23 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
58:23 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
58:23 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
58:23 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.04875006230534258
58:23 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
58:23 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
58:23 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
58:23 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:23 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
58:23 DEBUG   opendrift.models.oceandrift:618: 1 elements penetrated seafloor, lifting up
58:23 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:23 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:23 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:23 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:23 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:23 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:23 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:23 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:23 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:23 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:23 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:23 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:23 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:23 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:23 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:23 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:23 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:23 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:23 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:23 DEBUG   opendrift.models.oceandrift:618: 1 elements penetrated seafloor, lifting up
58:23 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:23 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:23 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:23 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:23 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:23 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:23 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:23 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
58:23 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
58:23 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:23 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:23 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:23 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
58:23 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 5
58:23 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
58:23 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 5 elements
58:23 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
58:23 INFO    opendrift.models.chemicaldrift:1861: partitioning: [169, 0, 232, 99, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
58:23 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
58:23 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
58:23 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
58:23 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
58:23 DEBUG   opendrift.models.basemodel:2041: ======================================================================
58:23 INFO    opendrift.models.basemodel:2042: 2024-06-23 13:56:45.968543 - step 95 of 96 - 500 active elements (0 deactivated)
58:23 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
58:23 DEBUG   opendrift.models.basemodel:2050: ======================================================================
58:23 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.965088072288246
58:23 DEBUG   opendrift.models.basemodel:2066:               10.513855162050824 <- longitude -> 10.9742580630416
58:23 DEBUG   opendrift.models.basemodel:2071:               -46.24580161417856   <- z ->   0.0
58:23 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
58:23 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:23 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
58:23 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:23 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
58:23 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:23 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:23 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
58:23 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-23 13:00:00 (before)
                2024-06-23 14:00:00 (after)
58:23 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-23 13:00:00) in space  (linearNDFast)
58:23 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
58:23 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-23 14:00:00) in space  (linearNDFast)
58:23 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
58:23 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:23 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:23 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:23 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:23 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:23 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:23 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:23 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:23 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:23 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:23 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:23 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:23 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:23 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:23 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:23 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:23 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:23 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:23 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:23 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:23 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:23 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:23 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:23 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:23 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:23 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:23 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:23 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:23 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:23 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:23 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-23 13:00:00, weight 0.05) and
                      after (2024-06-23 14:00:00, weight 0.95) in time
58:23 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
58:23 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615593067373 and -59.02575292615333 degrees.
58:23 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615593067373 and -59.02575292615333 degrees.
58:23 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:23 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:23 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
58:23 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:23 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
58:23 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:23 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:23 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
58:23 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
58:23 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
58:23 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:23 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:23 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
58:23 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:23 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
58:23 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:23 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:23 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
58:23 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
58:23 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
58:23 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
58:23 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:23 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
58:23 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
58:23 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
58:23 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
58:23 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
58:23 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
58:23 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
58:23 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.162937 (min) 0.567621 (max)
58:23 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.285663 (min) 0.431192 (max)
58:23 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
58:23 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: 4.80036 (min) 8.50522 (max)
58:23 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: -0.408882 (min) 3.05658 (max)
58:23 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
58:23 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.9359 (min) 192.529 (max)
58:23 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
58:23 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 11.0146 (min) 15.6837 (max)
58:23 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 25.8812 (min) 33.8899 (max)
58:23 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.00120451 (min) 0.00128381 (max)
58:23 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
58:23 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
58:23 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
58:23 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
58:23 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
58:23 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
58:23 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
58:23 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
58:23 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:23 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
58:23 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
58:23 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
58:23 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
58:23 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 7
58:23 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 2 0 0 2 0 2]
58:23 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 3 3 0 3 0]
58:23 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[0.00e+00 0.00e+00 1.00e+00 5.36e+02 0.00e+00]
 [0.00e+00 0.00e+00 0.00e+00 0.00e+00 0.00e+00]
 [2.42e+02 0.00e+00 0.00e+00 6.72e+02 0.00e+00]
 [1.60e+01 0.00e+00 1.09e+03 0.00e+00 0.00e+00]
 [0.00e+00 0.00e+00 0.00e+00 0.00e+00 0.00e+00]]
58:23 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
58:23 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
58:23 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
58:23 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
58:23 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.05559388626977184
58:23 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
58:23 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
58:23 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
58:23 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:23 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:23 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:23 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:23 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:23 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:23 DEBUG   opendrift.models.oceandrift:618: 9 elements penetrated seafloor, lifting up
58:23 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:23 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:23 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:23 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:23 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:23 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:23 DEBUG   opendrift.models.oceandrift:618: 10 elements penetrated seafloor, lifting up
58:23 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:23 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:23 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:23 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:23 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:23 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:23 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:23 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:23 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:23 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:23 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:23 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:23 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
58:23 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:23 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:23 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:23 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:23 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:23 DEBUG   opendrift.models.oceandrift:618: 1 elements penetrated seafloor, lifting up
58:23 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:23 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:23 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:23 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:23 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:23 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:23 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 5
58:23 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
58:23 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 5 elements
58:23 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
58:23 INFO    opendrift.models.chemicaldrift:1861: partitioning: [170, 0, 228, 102, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
58:23 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
58:23 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
58:23 DEBUG   opendrift.models.basemodel:895: to be seeded: 0, already seeded 500
58:23 DEBUG   opendrift.models.basemodel:754: No elements hit seafloor.
58:23 DEBUG   opendrift.models.basemodel:2041: ======================================================================
58:23 INFO    opendrift.models.basemodel:2042: 2024-06-23 14:26:45.968543 - step 96 of 96 - 500 active elements (0 deactivated)
58:23 DEBUG   opendrift.models.basemodel:2048: 0 elements scheduled.
58:23 DEBUG   opendrift.models.basemodel:2050: ======================================================================
58:23 DEBUG   opendrift.models.basemodel:2061:               57.556870176805745 <- latitude  -> 57.970047894988
58:23 DEBUG   opendrift.models.basemodel:2066:               10.513855162050824 <- longitude -> 10.984196241162593
58:23 DEBUG   opendrift.models.basemodel:2071:               -47.598556073998395   <- z ->   0.0
58:23 DEBUG   opendrift.models.basemodel:2072: ---------------------------------
58:23 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:23 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['sea_floor_depth_below_sea_level', 'x_wind', 'y_wind', 'sea_water_salinity', 'sea_water_temperature', 'x_sea_water_velocity', 'y_sea_water_velocity', 'upward_sea_water_velocity']
58:23 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:23 DEBUG   opendrift.models.basemodel.environment:613: Calling reader https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
58:23 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:23 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:23 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be covering 500 elements
58:23 DEBUG   opendrift.readers.basereader.structured:222: Reader time:
                2024-06-23 14:00:00 (before)
                2024-06-23 15:00:00 (after)
58:25 DEBUG   opendrift.readers.basereader.variables:633: Checking sea_floor_depth_below_sea_level for invalid values
58:25 DEBUG   opendrift.readers.basereader.variables:633: Checking x_wind for invalid values
58:25 DEBUG   opendrift.readers.basereader.variables:633: Checking y_wind for invalid values
58:25 DEBUG   opendrift.readers.basereader.variables:633: Checking x_sea_water_velocity for invalid values
58:25 DEBUG   opendrift.readers.basereader.variables:633: Checking y_sea_water_velocity for invalid values
58:25 DEBUG   opendrift.readers.interpolation.structured:53: Filled NaN-values toward seafloor for :['sea_water_temperature', 'upward_sea_water_velocity', 'x_sea_water_velocity', 'y_sea_water_velocity', 'sea_water_salinity']
58:25 DEBUG   opendrift.readers.basereader.structured:313: Fetched env-block (size 82x52x7) for time after (2024-06-23 15:00:00)
58:25 DEBUG   opendrift.readers.basereader.structured:334: Interpolating before (2024-06-23 14:00:00) in space  (linearNDFast)
58:25 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
58:25 DEBUG   opendrift.readers.basereader.structured:340: Interpolating after (2024-06-23 15:00:00) in space  (linearNDFast)
58:25 DEBUG   opendrift.readers.interpolation.structured:80: Initialising interpolator.
58:25 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:25 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:25 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:25 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:25 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:25 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:25 DEBUG   opendrift:135: Linear2DInterpolator informational: NaN values for 1 elements, expanding data 1
58:25 DEBUG   opendrift.readers.basereader.structured:355: Interpolating before (2024-06-23 14:00:00, weight 0.55) and
                      after (2024-06-23 15:00:00, weight 0.45) in time
58:25 DEBUG   opendrift.readers.basereader.structured:368: Interpolating profiles in time
58:25 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615593067373 and -59.01581474026663 degrees.
58:25 DEBUG   opendrift.readers.basereader.variables:96: Rotating vectors between -59.48615593067373 and -59.01581474026663 degrees.
58:25 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:25 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:25 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['ocean_mixed_layer_thickness']
58:25 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:25 DEBUG   opendrift.models.basemodel.environment:613: Calling reader constant_reader
58:25 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:25 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:25 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from constant_reader covering 500 elements
58:25 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
58:25 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
58:25 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:25 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:25 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
58:25 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:25 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
58:25 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:25 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:25 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
58:25 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
58:25 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
58:25 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
58:25 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:25 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
58:25 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
58:25 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 0.0001 for ocean_vertical_diffusivity for all profiles
58:25 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 10 for sea_water_temperature for 0 profiles
58:25 DEBUG   opendrift.models.basemodel.environment:814:       Using fallback value 34 for sea_water_salinity for 0 profiles
58:25 DEBUG   opendrift.models.basemodel.environment:803:       Using fallback value 8.1 for sea_water_ph_reported_on_total_scale for all profiles
58:25 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
58:25 DEBUG   opendrift.models.basemodel.environment:905:     x_sea_water_velocity: -0.166948 (min) 0.50331 (max)
58:25 DEBUG   opendrift.models.basemodel.environment:905:     y_sea_water_velocity: -0.391075 (min) 0.420487 (max)
58:25 DEBUG   opendrift.models.basemodel.environment:905:     sea_surface_height: 0 (min) 0 (max)
58:25 DEBUG   opendrift.models.basemodel.environment:905:     x_wind: 5.39901 (min) 8.56261 (max)
58:25 DEBUG   opendrift.models.basemodel.environment:905:     y_wind: 0.0989412 (min) 3.34926 (max)
58:25 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
58:25 DEBUG   opendrift.models.basemodel.environment:905:     sea_floor_depth_below_sea_level: 9.9359 (min) 193.773 (max)
58:25 DEBUG   opendrift.models.basemodel.environment:905:     ocean_vertical_diffusivity: 0.0001 (min) 0.0001 (max)
58:25 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_temperature: 10.8968 (min) 15.7739 (max)
58:25 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_salinity: 26.3159 (min) 33.9308 (max)
58:25 DEBUG   opendrift.models.basemodel.environment:905:     upward_sea_water_velocity: -0.00073561 (min) 0.00106123 (max)
58:25 DEBUG   opendrift.models.basemodel.environment:905:     spm: 1 (min) 1 (max)
58:25 DEBUG   opendrift.models.basemodel.environment:905:     ocean_mixed_layer_thickness: 40 (min) 40 (max)
58:25 DEBUG   opendrift.models.basemodel.environment:905:     active_sediment_layer_thickness: 0.03 (min) 0.03 (max)
58:25 DEBUG   opendrift.models.basemodel.environment:905:     doc: 0 (min) 0 (max)
58:25 DEBUG   opendrift.models.basemodel.environment:905:     sea_water_ph_reported_on_total_scale: 8.1 (min) 8.1 (max)
58:25 DEBUG   opendrift.models.basemodel.environment:905:     pH_sediment: 6.9 (min) 6.9 (max)
58:25 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
58:25 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
58:25 DEBUG   opendrift.models.basemodel:759: Lifting 4 elements to seafloor.
58:25 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
58:25 DEBUG   opendrift.models.basemodel:2113: Calling ChemicalDrift.update()
58:25 DEBUG   opendrift.models.chemicaldrift:1667: Calculating overall degradation using overall rate constants
58:25 DEBUG   opendrift.models.chemicaldrift:1722: Calculating: volatilization
58:25 INFO    opendrift.models.chemicaldrift:1435: Number of transformations: 5
58:25 DEBUG   opendrift.models.chemicaldrift:1452: old species: [2 3 2 0 2]
58:25 DEBUG   opendrift.models.chemicaldrift:1453: new species: [0 0 0 3 0]
58:25 DEBUG   opendrift.models.chemicaldrift:1460: Number of transformations total:
 [[0.000e+00 0.000e+00 1.000e+00 5.370e+02 0.000e+00]
 [0.000e+00 0.000e+00 0.000e+00 0.000e+00 0.000e+00]
 [2.450e+02 0.000e+00 0.000e+00 6.770e+02 0.000e+00]
 [1.700e+01 0.000e+00 1.095e+03 0.000e+00 0.000e+00]
 [0.000e+00 0.000e+00 0.000e+00 0.000e+00 0.000e+00]]
58:25 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 0 elements
58:25 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
58:25 DEBUG   opendrift.models.chemicaldrift:1504: Adding uncertainty for desorption from sediments: 0.5 m
58:25 DEBUG   opendrift.models.oceandrift:530: Using functional expression for diffusivity
58:25 DEBUG   opendrift.models.oceandrift:535: Diffusivities are in range 0.0 to 0.0565392192673671
58:25 DEBUG   opendrift.models.oceandrift:554: TSprofiles deactivated for vertical mixing
58:25 DEBUG   opendrift.models.oceandrift:568: Vertical mixing module:windspeed_Large1994
58:25 DEBUG   opendrift.models.oceandrift:571: Turbulent diffusion with random walk scheme using 30 fast time steps of dt=60s
58:25 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:25 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:25 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:25 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:25 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:25 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:25 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:25 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:25 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:25 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
58:25 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:25 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:25 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:25 DEBUG   opendrift.models.oceandrift:618: 1 elements penetrated seafloor, lifting up
58:25 DEBUG   opendrift.models.oceandrift:636: 2 elements reached seafloor, interacting with bottom
58:25 DEBUG   opendrift.models.basemodel:759: Lifting 2 elements to seafloor.
58:25 DEBUG   opendrift.models.oceandrift:618: 8 elements penetrated seafloor, lifting up
58:25 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:25 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:25 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:25 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:25 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:25 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
58:25 DEBUG   opendrift.models.oceandrift:618: 1 elements penetrated seafloor, lifting up
58:25 DEBUG   opendrift.models.oceandrift:618: 1 elements penetrated seafloor, lifting up
58:25 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:25 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:25 DEBUG   opendrift.models.oceandrift:618: 2 elements penetrated seafloor, lifting up
58:25 DEBUG   opendrift.models.oceandrift:618: 5 elements penetrated seafloor, lifting up
58:25 DEBUG   opendrift.models.oceandrift:618: 6 elements penetrated seafloor, lifting up
58:25 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:25 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:25 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:25 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:25 DEBUG   opendrift.models.oceandrift:618: 1 elements penetrated seafloor, lifting up
58:25 DEBUG   opendrift.models.oceandrift:618: 1 elements penetrated seafloor, lifting up
58:25 DEBUG   opendrift.models.oceandrift:618: 7 elements penetrated seafloor, lifting up
58:25 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:25 DEBUG   opendrift.models.oceandrift:618: 4 elements penetrated seafloor, lifting up
58:25 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:25 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:25 DEBUG   opendrift.models.oceandrift:618: 3 elements penetrated seafloor, lifting up
58:25 DEBUG   opendrift.models.oceandrift:636: 1 elements reached seafloor, interacting with bottom
58:25 DEBUG   opendrift.models.basemodel:759: Lifting 1 elements to seafloor.
58:25 INFO    opendrift.models.chemicaldrift:1633: Number of resuspended particles: 10
58:25 DEBUG   opendrift.models.chemicaldrift:1638: Adding uncertainty for resuspension from sediments: 0.5 m
58:25 DEBUG   opendrift.models.chemicaldrift:1539: Updated particle diameter for 10 elements
58:25 DEBUG   opendrift.models.chemicaldrift:1543: Adding uncertainty for particle diameter: 5e-06 m
58:25 INFO    opendrift.models.chemicaldrift:1861: partitioning: [173, 0, 227, 100, 0] ['LMM', 'Humic colloid', 'Particle reversible', 'Sediment reversible', 'Sediment slowly reversible']
58:25 DEBUG   opendrift.models.basemodel:1665: Horizontal diffusivity is 0, no random walk.
58:25 DEBUG   opendrift.models.basemodel:2128: 500 active elements (0 deactivated)
58:25 DEBUG   opendrift.models.basemodel:2157: Cleaning up
58:25 DEBUG   opendrift.models.basemodel.environment:607: ----------------------------------------
58:25 DEBUG   opendrift.models.basemodel.environment:608: Variable group ['land_binary_mask']
58:25 DEBUG   opendrift.models.basemodel.environment:609: ----------------------------------------
58:25 DEBUG   opendrift.models.basemodel.environment:613: Calling reader global_landmask
58:25 DEBUG   opendrift.models.basemodel.environment:614: ----------------------------------------
58:25 DEBUG   opendrift.models.basemodel.environment:630: Data needed for 500 elements
58:25 DEBUG   opendrift.readers.basereader.variables:752: Fetching variables from global_landmask covering 500 elements
58:25 DEBUG   opendrift.readers.basereader.continuous:37: Fetched env-before
58:25 DEBUG   opendrift.readers.basereader.variables:633: Checking land_binary_mask for invalid values
58:25 DEBUG   opendrift.readers.basereader.variables:788: Reader projection is latlon - rotation of vectors is not needed.
58:25 DEBUG   opendrift.models.basemodel.environment:764: Obtained data for all elements.
58:25 DEBUG   opendrift.models.basemodel.environment:777: ---------------------------------------
58:25 DEBUG   opendrift.models.basemodel.environment:778: Finished processing all variable groups
58:25 DEBUG   opendrift.models.basemodel.environment:903: ------------ SUMMARY -------------
58:25 DEBUG   opendrift.models.basemodel.environment:905:     land_binary_mask: 0 (min) 0 (max)
58:25 DEBUG   opendrift.models.basemodel.environment:907: ---------------------------------
58:25 DEBUG   opendrift.models.basemodel:715: No elements hit coastline.
58:25 DEBUG   opendrift.models.basemodel:1714: No elements to deactivate
58:26 DEBUG   opendrift.models.basemodel:95: Changed mode from Mode.Run to Mode.Result

Print and plot results

print('Final speciation:')
for isp,sp in enumerate(o.name_species):
    print ('{:32}: {:>6}'.format(sp,sum(o.elements.specie==isp)))

print('Number of transformations:')
for isp in range(o.nspecies):
    print('{}'.format(['{:>9}'.format(np.int32(item)) for item in o.ntransformations[isp,:]]) )

mass = o.get_property('mass')
mass_d = o.get_property('mass_degraded')
mass_v = o.get_property('mass_volatilized')

m_pre = sum(mass[0][-1])
m_deg = sum(mass_d[0][-1])
m_vol = sum(mass_v[0][-1])
m_tot = m_pre + m_deg + m_vol

print('Mass budget for target chemical:')
print('mass preserved       : {:.3f}'.format(m_pre * 1e-6),' g   {:.3f}'.format(m_pre/m_tot*100),'%')
print('mass degraded        : {:.3f}'.format(m_deg * 1e-6),' g   {:.3f}'.format(m_deg/m_tot*100),'%')
print('mass volatilized     : {:.3f}'.format(m_vol * 1e-6),' g   {:.3f}'.format(m_vol/m_tot*100),'%')

legend=['dissolved', '', 'SPM', 'sediment', '']

o.animation_profile(color='specie',
            markersize='mass',
            markersize_scaling=30,
            alpha=.5,
            vmin=0,vmax=o.nspecies-1,
            legend = legend,
            legend_loc = 3,
            fps = 10
            )

Final speciation:
LMM                             :    173
Humic colloid                   :      0
Particle reversible             :    227
Sediment reversible             :    100
Sediment slowly reversible      :      0
Number of transformations:
['        0', '        0', '        1', '      537', '        0']
['        0', '        0', '        0', '        0', '        0']
['      245', '        0', '        0', '      685', '        0']
['       17', '        0', '     1105', '        0', '        0']
['        0', '        0', '        0', '        0', '        0']
Mass budget for target chemical:
mass preserved       : 0.352  g   35.249 %
mass degraded        : 0.646  g   64.592 %
mass volatilized     : 0.002  g   0.159 %
14:58:26 DEBUG   opendrift.models.basemodel:3048: Saving animation..
14:58:26 INFO    opendrift.models.basemodel:4612: Saving animation to /root/project/docs/source/gallery/animations/example_chemicaldrift_0.gif...
14:58:38 DEBUG   opendrift.models.basemodel:4650: MPLBACKEND = agg
14:58:38 DEBUG   opendrift.models.basemodel:4651: DISPLAY = None
14:58:38 DEBUG   opendrift.models.basemodel:4652: Time to save animation: 0:00:11.901220
14:58:38 INFO    opendrift.models.basemodel:3255: Time to make animation: 0:00:12.122601

o.animation(color='specie',
            markersize='mass',
            markersize_scaling=100,
            alpha=.5,
            vmin=0,vmax=o.nspecies-1,
            colorbar=False,
            fast = True,
            legend = legend,
            legend_loc = 3,
            fps=10
            )

58:38 DEBUG   opendrift.models.basemodel:2369: Setting up map: corners=None, fast=True, lscale=None
58:38 WARNING opendrift.models.basemodel:2415: Plotting fast. This will make your plots less accurate.
58:40 DEBUG   opendrift.models.basemodel:3048: Saving animation..
58:40 INFO    opendrift.models.basemodel:4612: Saving animation to /root/project/docs/source/gallery/animations/example_chemicaldrift_1.gif...
59:32 DEBUG   opendrift.models.basemodel:4650: MPLBACKEND = agg
59:32 DEBUG   opendrift.models.basemodel:4651: DISPLAY = None
59:32 DEBUG   opendrift.models.basemodel:4652: Time to save animation: 0:00:52.269690
59:32 INFO    opendrift.models.basemodel:3041: Time to make animation: 0:00:54.489567

o.plot_mass(legend = legend,
            time_unit = 'hours',
            title = 'Chemical mass budget')

dissolved : 0.079226453125g (22.476211719601903%)
SPM : 0.21733990625g (61.658417805049616%)
sediment : 0.0559238828125g (15.865370475348488%)
/root/project/opendrift/models/chemicaldrift.py:3006: UserWarning: set_ticklabels() should only be used with a fixed number of ticks, i.e. after set_ticks() or using a FixedLocator.
  ax.axes.get_xaxis().set_ticklabels(np.round(ax.axes.get_xticks() * time_conversion_factor))

Total running time of the script: (3 minutes 0.284 seconds)

Gallery generated by Sphinx-Gallery