Drift at different depths

from datetime import datetime, timedelta
import numpy as np
from opendrift.models.oceandrift import OceanDrift

o = OceanDrift(loglevel=20)  # Set loglevel to 0 for debug information
14:55:37 INFO    opendrift.models.basemodel:519: OpenDriftSimulation initialised (version 1.11.10 / v1.11.10-15-g65004d9)

Using live data from Thredds

o.add_readers_from_list([
    'https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be'])

Adding some diffusion

o.set_config('drift:horizontal_diffusivity', 10)  # m2/s

Seed 1000 elements at random depths

z = -np.random.rand(2000)*50
o.seed_elements(lon=4.8, lat=60.0, z=z, radius=0, number=2000,
                time=datetime.utcnow())

print(o)
14:55:37 INFO    opendrift.models.basemodel.environment:218: Adding a dynamical landmask with max. priority based on assumed maximum speed of 2.0 m/s. Adding a customised landmask may be faster...
14:55:43 INFO    opendrift.models.basemodel.environment:245: Fallback values will be used for the following variables which have no readers:
14:55:43 INFO    opendrift.models.basemodel.environment:248:    x_sea_water_velocity: 0.000000
14:55:43 INFO    opendrift.models.basemodel.environment:248:    y_sea_water_velocity: 0.000000
14:55:43 INFO    opendrift.models.basemodel.environment:248:    sea_surface_height: 0.000000
14:55:43 INFO    opendrift.models.basemodel.environment:248:    x_wind: 0.000000
14:55:43 INFO    opendrift.models.basemodel.environment:248:    y_wind: 0.000000
14:55:43 INFO    opendrift.models.basemodel.environment:248:    upward_sea_water_velocity: 0.000000
14:55:43 INFO    opendrift.models.basemodel.environment:248:    ocean_vertical_diffusivity: 0.000000
14:55:43 INFO    opendrift.models.basemodel.environment:248:    sea_surface_wave_significant_height: 0.000000
14:55:43 INFO    opendrift.models.basemodel.environment:248:    sea_surface_wave_stokes_drift_x_velocity: 0.000000
14:55:43 INFO    opendrift.models.basemodel.environment:248:    sea_surface_wave_stokes_drift_y_velocity: 0.000000
14:55:43 INFO    opendrift.models.basemodel.environment:248:    sea_surface_wave_period_at_variance_spectral_density_maximum: 0.000000
14:55:43 INFO    opendrift.models.basemodel.environment:248:    sea_surface_wave_mean_period_from_variance_spectral_density_second_frequency_moment: 0.000000
14:55:43 INFO    opendrift.models.basemodel.environment:248:    sea_surface_swell_wave_to_direction: 0.000000
14:55:43 INFO    opendrift.models.basemodel.environment:248:    sea_surface_swell_wave_peak_period_from_variance_spectral_density: 0.000000
14:55:43 INFO    opendrift.models.basemodel.environment:248:    sea_surface_swell_wave_significant_height: 0.000000
14:55:43 INFO    opendrift.models.basemodel.environment:248:    sea_surface_wind_wave_to_direction: 0.000000
14:55:43 INFO    opendrift.models.basemodel.environment:248:    sea_surface_wind_wave_mean_period: 0.000000
14:55:43 INFO    opendrift.models.basemodel.environment:248:    sea_surface_wind_wave_significant_height: 0.000000
14:55:43 INFO    opendrift.models.basemodel.environment:248:    surface_downward_x_stress: 0.000000
14:55:43 INFO    opendrift.models.basemodel.environment:248:    surface_downward_y_stress: 0.000000
14:55:43 INFO    opendrift.models.basemodel.environment:248:    turbulent_kinetic_energy: 0.000000
14:55:43 INFO    opendrift.models.basemodel.environment:248:    turbulent_generic_length_scale: 0.000000
14:55:43 INFO    opendrift.models.basemodel.environment:248:    ocean_mixed_layer_thickness: 50.000000
14:55:43 INFO    opendrift.models.basemodel.environment:248:    sea_floor_depth_below_sea_level: 10000.000000
===========================
Model:  OceanDrift     (OpenDrift version 1.11.10)
        0 active Lagrangian3DArray particles  (0 deactivated, 2000 scheduled)
-------------------
Environment variables:
  -----
  land_binary_mask
     1) global_landmask
  -----
Readers not added for the following variables:
  ocean_mixed_layer_thickness
  ocean_vertical_diffusivity
  sea_floor_depth_below_sea_level
  sea_surface_height
  sea_surface_swell_wave_peak_period_from_variance_spectral_density
  sea_surface_swell_wave_significant_height
  sea_surface_swell_wave_to_direction
  sea_surface_wave_mean_period_from_variance_spectral_density_second_frequency_moment
  sea_surface_wave_period_at_variance_spectral_density_maximum
  sea_surface_wave_significant_height
  sea_surface_wave_stokes_drift_x_velocity
  sea_surface_wave_stokes_drift_y_velocity
  sea_surface_wind_wave_mean_period
  sea_surface_wind_wave_significant_height
  sea_surface_wind_wave_to_direction
  surface_downward_x_stress
  surface_downward_y_stress
  turbulent_generic_length_scale
  turbulent_kinetic_energy
  upward_sea_water_velocity
  x_sea_water_velocity
  x_wind
  y_sea_water_velocity
  y_wind
---
Lazy readers:
  LazyReader: https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be

Discarded readers:
===========================

Running model

o.run(duration=timedelta(hours=24), time_step=1800)
14:55:43 INFO    opendrift.models.basemodel:940: Using existing reader for land_binary_mask
14:55:43 INFO    opendrift.models.basemodel:951: All points are in ocean
14:55:43 INFO    opendrift.models.basemodel:2042: 2024-07-01 14:55:37.434395 - step 1 of 48 - 2000 active elements (0 deactivated)
14:55:43 INFO    opendrift.readers.reader_netCDF_CF_generic:102: Opening dataset: https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
/opt/conda/envs/opendrift/lib/python3.11/site-packages/pyproj/crs/crs.py:1286: UserWarning: You will likely lose important projection information when converting to a PROJ string from another format. See: https://proj.org/faq.html#what-is-the-best-format-for-describing-coordinate-reference-systems
  proj = self._crs.to_proj4(version=version)
14:55:45 INFO    opendrift.readers.reader_netCDF_CF_generic:314: Detected dimensions: {'x': 'X', 'y': 'Y', 'z': 'depth', 'time': 'time'}
14:55:47 INFO    opendrift.models.basemodel:2042: 2024-07-01 15:25:37.434395 - step 2 of 48 - 2000 active elements (0 deactivated)
14:55:49 INFO    opendrift.models.basemodel:2042: 2024-07-01 15:55:37.434395 - step 3 of 48 - 2000 active elements (0 deactivated)
14:55:49 INFO    opendrift.models.basemodel:2042: 2024-07-01 16:25:37.434395 - step 4 of 48 - 2000 active elements (0 deactivated)
14:55:50 INFO    opendrift.models.basemodel:2042: 2024-07-01 16:55:37.434395 - step 5 of 48 - 2000 active elements (0 deactivated)
14:55:50 INFO    opendrift.models.basemodel:2042: 2024-07-01 17:25:37.434395 - step 6 of 48 - 2000 active elements (0 deactivated)
14:55:51 INFO    opendrift.models.basemodel:2042: 2024-07-01 17:55:37.434395 - step 7 of 48 - 2000 active elements (0 deactivated)
14:55:51 INFO    opendrift.models.basemodel:2042: 2024-07-01 18:25:37.434395 - step 8 of 48 - 2000 active elements (0 deactivated)
14:55:52 INFO    opendrift.models.basemodel:2042: 2024-07-01 18:55:37.434395 - step 9 of 48 - 2000 active elements (0 deactivated)
14:55:52 INFO    opendrift.models.basemodel:2042: 2024-07-01 19:25:37.434395 - step 10 of 48 - 2000 active elements (0 deactivated)
14:55:54 INFO    opendrift.models.basemodel:2042: 2024-07-01 19:55:37.434395 - step 11 of 48 - 2000 active elements (0 deactivated)
14:55:54 INFO    opendrift.models.basemodel:2042: 2024-07-01 20:25:37.434395 - step 12 of 48 - 2000 active elements (0 deactivated)
14:55:55 INFO    opendrift.models.basemodel:2042: 2024-07-01 20:55:37.434395 - step 13 of 48 - 2000 active elements (0 deactivated)
14:55:55 INFO    opendrift.models.basemodel:2042: 2024-07-01 21:25:37.434395 - step 14 of 48 - 2000 active elements (0 deactivated)
14:55:56 INFO    opendrift.models.basemodel:2042: 2024-07-01 21:55:37.434395 - step 15 of 48 - 2000 active elements (0 deactivated)
14:55:56 INFO    opendrift.models.basemodel:2042: 2024-07-01 22:25:37.434395 - step 16 of 48 - 2000 active elements (0 deactivated)
14:55:57 INFO    opendrift.models.basemodel:2042: 2024-07-01 22:55:37.434395 - step 17 of 48 - 2000 active elements (0 deactivated)
14:55:57 INFO    opendrift.models.basemodel:2042: 2024-07-01 23:25:37.434395 - step 18 of 48 - 2000 active elements (0 deactivated)
14:55:59 INFO    opendrift.models.basemodel:2042: 2024-07-01 23:55:37.434395 - step 19 of 48 - 2000 active elements (0 deactivated)
14:55:59 INFO    opendrift.models.basemodel:2042: 2024-07-02 00:25:37.434395 - step 20 of 48 - 2000 active elements (0 deactivated)
14:56:00 INFO    opendrift.models.basemodel:2042: 2024-07-02 00:55:37.434395 - step 21 of 48 - 2000 active elements (0 deactivated)
14:56:00 INFO    opendrift.models.basemodel:2042: 2024-07-02 01:25:37.434395 - step 22 of 48 - 2000 active elements (0 deactivated)
14:56:01 INFO    opendrift.models.basemodel:2042: 2024-07-02 01:55:37.434395 - step 23 of 48 - 2000 active elements (0 deactivated)
14:56:01 INFO    opendrift.models.basemodel:2042: 2024-07-02 02:25:37.434395 - step 24 of 48 - 2000 active elements (0 deactivated)
14:56:02 INFO    opendrift.models.basemodel:2042: 2024-07-02 02:55:37.434395 - step 25 of 48 - 2000 active elements (0 deactivated)
14:56:02 INFO    opendrift.models.basemodel:2042: 2024-07-02 03:25:37.434395 - step 26 of 48 - 2000 active elements (0 deactivated)
14:56:04 INFO    opendrift.models.basemodel:2042: 2024-07-02 03:55:37.434395 - step 27 of 48 - 2000 active elements (0 deactivated)
14:56:04 INFO    opendrift.models.basemodel:2042: 2024-07-02 04:25:37.434395 - step 28 of 48 - 2000 active elements (0 deactivated)
14:56:05 INFO    opendrift.models.basemodel:2042: 2024-07-02 04:55:37.434395 - step 29 of 48 - 2000 active elements (0 deactivated)
14:56:05 INFO    opendrift.models.basemodel:2042: 2024-07-02 05:25:37.434395 - step 30 of 48 - 2000 active elements (0 deactivated)
14:56:06 INFO    opendrift.models.basemodel:2042: 2024-07-02 05:55:37.434395 - step 31 of 48 - 2000 active elements (0 deactivated)
14:56:06 INFO    opendrift.models.basemodel:2042: 2024-07-02 06:25:37.434395 - step 32 of 48 - 2000 active elements (0 deactivated)
14:56:10 INFO    opendrift.models.basemodel:2042: 2024-07-02 06:55:37.434395 - step 33 of 48 - 2000 active elements (0 deactivated)
14:56:10 INFO    opendrift.models.basemodel:2042: 2024-07-02 07:25:37.434395 - step 34 of 48 - 2000 active elements (0 deactivated)
14:56:11 INFO    opendrift.models.basemodel:2042: 2024-07-02 07:55:37.434395 - step 35 of 48 - 2000 active elements (0 deactivated)
14:56:11 INFO    opendrift.models.basemodel:2042: 2024-07-02 08:25:37.434395 - step 36 of 48 - 2000 active elements (0 deactivated)
14:56:12 INFO    opendrift.models.basemodel:2042: 2024-07-02 08:55:37.434395 - step 37 of 48 - 2000 active elements (0 deactivated)
14:56:12 INFO    opendrift.models.basemodel:2042: 2024-07-02 09:25:37.434395 - step 38 of 48 - 2000 active elements (0 deactivated)
14:56:13 INFO    opendrift.models.basemodel:2042: 2024-07-02 09:55:37.434395 - step 39 of 48 - 2000 active elements (0 deactivated)
14:56:14 INFO    opendrift.models.basemodel:2042: 2024-07-02 10:25:37.434395 - step 40 of 48 - 2000 active elements (0 deactivated)
14:56:15 INFO    opendrift.models.basemodel:2042: 2024-07-02 10:55:37.434395 - step 41 of 48 - 2000 active elements (0 deactivated)
14:56:15 INFO    opendrift.models.basemodel:2042: 2024-07-02 11:25:37.434395 - step 42 of 48 - 2000 active elements (0 deactivated)
14:56:16 INFO    opendrift.models.basemodel:2042: 2024-07-02 11:55:37.434395 - step 43 of 48 - 2000 active elements (0 deactivated)
14:56:16 INFO    opendrift.models.basemodel:2042: 2024-07-02 12:25:37.434395 - step 44 of 48 - 2000 active elements (0 deactivated)
14:56:17 INFO    opendrift.models.basemodel:2042: 2024-07-02 12:55:37.434395 - step 45 of 48 - 2000 active elements (0 deactivated)
14:56:17 INFO    opendrift.models.basemodel:2042: 2024-07-02 13:25:37.434395 - step 46 of 48 - 2000 active elements (0 deactivated)
14:56:18 INFO    opendrift.models.basemodel:2042: 2024-07-02 13:55:37.434395 - step 47 of 48 - 2000 active elements (0 deactivated)
14:56:19 INFO    opendrift.models.basemodel:2042: 2024-07-02 14:25:37.434395 - step 48 of 48 - 2000 active elements (0 deactivated)

Plot results with lines and particles colored by depth

print(o)
o.plot(linecolor='z', buffer=.1, show_elements=False, fast=False)
o.animation(color='z', buffer=.1, fast=True)
OpenDrift - OceanDrift 2024-07-01 14:55 to 2024-07-02 14:55 UTC (49 steps)
===========================
--------------------
Reader performance:
--------------------
global_landmask
 0:00:00.0  total
 0:00:00.0  preparing
 0:00:00.0  reading
 0:00:00.0  masking
--------------------
https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
 0:00:33.4  total
 0:00:00.0  preparing
 0:00:32.4  reading
 0:00:00.5  interpolation
 0:00:00.0  interpolation_time
 0:00:00.9  rotating vectors
 0:00:00.0  masking
--------------------
Performance:
   43.1 total time
    6.2 configuration
    0.0 preparing main loop
      0.0 moving elements to ocean
   36.8 main loop
      0.1 updating elements
    0.0 cleaning up
--------------------
===========================
Model:  OceanDrift     (OpenDrift version 1.11.10)
        2000 active Lagrangian3DArray particles  (0 deactivated, 0 scheduled)
-------------------
Environment variables:
  -----
  land_binary_mask
     1) global_landmask
  -----
  sea_floor_depth_below_sea_level
  upward_sea_water_velocity
  x_sea_water_velocity
  x_wind
  y_sea_water_velocity
  y_wind
     1) https://thredds.met.no/thredds/dodsC/sea/norkyst800m/1h/aggregate_be
  -----
Readers not added for the following variables:
  ocean_mixed_layer_thickness
  ocean_vertical_diffusivity
  sea_surface_height
  sea_surface_swell_wave_peak_period_from_variance_spectral_density
  sea_surface_swell_wave_significant_height
  sea_surface_swell_wave_to_direction
  sea_surface_wave_mean_period_from_variance_spectral_density_second_frequency_moment
  sea_surface_wave_period_at_variance_spectral_density_maximum
  sea_surface_wave_significant_height
  sea_surface_wave_stokes_drift_x_velocity
  sea_surface_wave_stokes_drift_y_velocity
  sea_surface_wind_wave_mean_period
  sea_surface_wind_wave_significant_height
  sea_surface_wind_wave_to_direction
  surface_downward_x_stress
  surface_downward_y_stress
  turbulent_generic_length_scale
  turbulent_kinetic_energy

Discarded readers:

Time:
        Start: 2024-07-01 14:55:37.434395 UTC
        Present: 2024-07-02 14:55:37.434395 UTC
        Calculation steps: 48 * 0:30:00 - total time: 1 day, 0:00:00
        Output steps: 49 * 0:30:00
===========================

14:57:52 WARNING opendrift.models.basemodel:2415: Plotting fast. This will make your plots less accurate.
14:57:54 INFO    opendrift.models.basemodel:4612: Saving animation to /root/project/docs/source/gallery/animations/example_depth_0.gif...
14:58:17 INFO    opendrift.models.basemodel:3041: Time to make animation: 0:00:25.154247
../_images/example_depth_0.gif

Total running time of the script: (2 minutes 52.034 seconds)

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