Input saved to /scratch/irc/personal/robrechtc/tmp//RtmpfX6oeK/input: data.rds params.json Attaching package: ‘dplyr’ The following objects are masked from ‘package:stats’: filter, lag The following objects are masked from ‘package:base’: intersect, setdiff, setequal, union Attaching package: ‘purrr’ The following object is masked from ‘package:jsonlite’: flatten Loading required package: Rcpp Loading required package: ggplot2 Loading required package: StanHeaders rstan (Version 2.17.3, GitRev: 2e1f913d3ca3) For execution on a local, multicore CPU with excess RAM we recommend calling options(mc.cores = parallel::detectCores()). To avoid recompilation of unchanged Stan programs, we recommend calling rstan_options(auto_write = TRUE) In file included from /usr/local/lib/R/site-library/RcppEigen/include/Eigen/Core:388:0, from /usr/local/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/mat/fun/Eigen_NumTraits.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/core/matrix_vari.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/core.hpp:14, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/mat.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/src/stan/model/model_header.hpp:4, from file1eb925e56a0d1.cpp:8: /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:60:39: warning: ignoring attributes on template argument ‘__m128 {aka __vector(4) float}’ [-Wignored-attributes] template<> struct is_arithmetic<__m128> { enum { value = true }; }; ^ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:61:40: warning: ignoring attributes on template argument ‘__m128i {aka __vector(2) long long int}’ [-Wignored-attributes] template<> struct is_arithmetic<__m128i> { enum { value = true }; }; ^ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:62:40: warning: ignoring attributes on template argument ‘__m128d {aka __vector(2) double}’ [-Wignored-attributes] template<> struct is_arithmetic<__m128d> { enum { value = true }; }; ^ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:161:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f {aka __vector(4) float}’ [-Wignored-attributes] template<> struct unpacket_traits { typedef float type; enum {size=4, alignment=Aligned16}; typedef Packet4f half; }; ^ In file included from /usr/local/lib/R/site-library/RcppEigen/include/Eigen/Core:388:0, from /usr/local/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/mat/fun/Eigen_NumTraits.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/core/matrix_vari.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/core.hpp:14, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/mat.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/src/stan/model/model_header.hpp:4, from file1eb925e56a0d1.cpp:8: /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:162:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d {aka __vector(2) double}’ [-Wignored-attributes] template<> struct unpacket_traits { typedef double type; enum {size=2, alignment=Aligned16}; typedef Packet2d half; }; ^ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:163:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i {aka __vector(2) long long int}’ [-Wignored-attributes] template<> struct unpacket_traits { typedef int type; enum {size=4, alignment=Aligned16}; typedef Packet4i half; }; ^ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:712:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f {aka __vector(4) float}’ [-Wignored-attributes] struct palign_impl ^ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:735:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i {aka __vector(2) long long int}’ [-Wignored-attributes] struct palign_impl ^ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:758:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d {aka __vector(2) double}’ [-Wignored-attributes] struct palign_impl ^ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:772:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f {aka __vector(4) float}’ [-Wignored-attributes] ptranspose(PacketBlock& kernel) { ^ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:777:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d {aka __vector(2) double}’ [-Wignored-attributes] ptranspose(PacketBlock& kernel) { ^ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:784:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i {aka __vector(2) long long int}’ [-Wignored-attributes] ptranspose(PacketBlock& kernel) { ^ In file included from /usr/local/lib/R/site-library/RcppEigen/include/Eigen/Core:371:0, from /usr/local/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/mat/fun/Eigen_NumTraits.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/core/matrix_vari.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/core.hpp:14, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/mat.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/src/stan/model/model_header.hpp:4, from file1eb925e56a0d1.cpp:8: /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f {aka __vector(4) float}’ [-Wignored-attributes] template<> struct conj_helper { \ ^ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f {aka __vector(4) float}’ [-Wignored-attributes] template<> struct conj_helper { \ ^ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d {aka __vector(2) double}’ [-Wignored-attributes] template<> struct conj_helper { \ ^ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d {aka __vector(2) double}’ [-Wignored-attributes] template<> struct conj_helper { \ ^ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/local/lib/R/site-library/RcppEigen/include/Eigen/Core:364:0, from /usr/local/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/mat/fun/Eigen_NumTraits.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/core/matrix_vari.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/core.hpp:14, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/mat.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/src/stan/model/model_header.hpp:4, from file1eb925e56a0d1.cpp:8: /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:224:7: required from ‘struct Eigen::internal::traits >’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:24:46: required from here /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(4) float}’ [-Wignored-attributes] bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(4) float}’ [-Wignored-attributes] bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(4) float}’ [-Wignored-attributes] /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half {aka __vector(4) float}’ [-Wignored-attributes] /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(4) float}’ [-Wignored-attributes] typedef typename find_best_packet_helper::type>::type type; ^~~~ In file included from /usr/local/lib/R/site-library/RcppEigen/include/Eigen/Core:430:0, from /usr/local/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/mat/fun/Eigen_NumTraits.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/core/matrix_vari.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/core.hpp:14, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/mat.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/src/stan/model/model_header.hpp:4, from file1eb925e56a0d1.cpp:8: /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:232:7: required from ‘class Eigen::Quaternion’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:27:3: required from here /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(4) float}’ [-Wignored-attributes] >::type PacketReturnType; ^~~~~~~~~~~~~~~~ In file included from /usr/local/lib/R/site-library/RcppEigen/include/Eigen/Core:364:0, from /usr/local/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/mat/fun/Eigen_NumTraits.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/core/matrix_vari.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/core.hpp:14, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/mat.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/src/stan/model/model_header.hpp:4, from file1eb925e56a0d1.cpp:8: /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:224:7: required from ‘struct Eigen::internal::traits >’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:88:47: required from here /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes] bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes] bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes] /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half {aka __vector(2) double}’ [-Wignored-attributes] /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes] typedef typename find_best_packet_helper::type>::type type; ^~~~ In file included from /usr/local/lib/R/site-library/RcppEigen/include/Eigen/Core:430:0, from /usr/local/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/mat/fun/Eigen_NumTraits.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/core/matrix_vari.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/core.hpp:14, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/mat.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/src/stan/model/model_header.hpp:4, from file1eb925e56a0d1.cpp:8: /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:232:7: required from ‘class Eigen::Quaternion’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:92:3: required from here /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes] >::type PacketReturnType; ^~~~~~~~~~~~~~~~ In file included from /usr/local/lib/R/site-library/RcppEigen/include/Eigen/Core:364:0, from /usr/local/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/mat/fun/Eigen_NumTraits.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/core/matrix_vari.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/core.hpp:14, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/mat.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/src/stan/model/model_header.hpp:4, from file1eb925e56a0d1.cpp:8: /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/mat/fun/typedefs.hpp:11:58: required from here /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes] bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes] bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes] /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half {aka __vector(2) double}’ [-Wignored-attributes] /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes] typedef typename find_best_packet_helper::type>::type type; ^~~~ In file included from /usr/local/lib/R/site-library/RcppEigen/include/Eigen/Core:430:0, from /usr/local/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/mat/fun/Eigen_NumTraits.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/core/matrix_vari.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/core.hpp:14, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/mat.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/src/stan/model/model_header.hpp:4, from file1eb925e56a0d1.cpp:8: /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/mat/fun/typedefs.hpp:11:58: required from here /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes] >::type PacketReturnType; ^~~~~~~~~~~~~~~~ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/mat/meta/operands_and_partials.hpp:19:20: required from here /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes] /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>’: /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::Matrix > >’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::Matrix > >’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp, Eigen::Matrix >’ /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/mat/meta/operands_and_partials.hpp:22:49: required from here /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes] In file included from /usr/local/lib/R/site-library/RcppEigen/include/Eigen/Core:364:0, from /usr/local/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/mat/fun/Eigen_NumTraits.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/core/matrix_vari.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/core.hpp:14, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/mat.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/src/stan/model/model_header.hpp:4, from file1eb925e56a0d1.cpp:8: /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PermutationMatrix.h:284:8: required from ‘struct Eigen::internal::traits >’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpositions.h:120:8: required from ‘struct Eigen::internal::traits >’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpositions.h:22:42: required from ‘class Eigen::TranspositionsBase >’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpositions.h:158:7: required from ‘class Eigen::Transpositions<-1, -1, int>’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:280:23: required from ‘class Eigen::LDLT, 1>’ /usr/local/lib/R/site-library/StanHeaders/include/stan/math/prim/mat/err/check_pos_definite.hpp:41:19: required from here /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) long long int}’ [-Wignored-attributes] bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) long long int}’ [-Wignored-attributes] bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) long long int}’ [-Wignored-attributes] /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) long long int>::half {aka __vector(2) long long int}’ [-Wignored-attributes] /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) long long int}’ [-Wignored-attributes] typedef typename find_best_packet_helper::type>::type type; ^~~~ In file included from /usr/local/lib/R/site-library/RcppEigen/include/Eigen/Core:430:0, from /usr/local/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/mat/fun/Eigen_NumTraits.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/core/matrix_vari.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/core.hpp:14, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/mat.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/src/stan/model/model_header.hpp:4, from file1eb925e56a0d1.cpp:8: /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpositions.h:23:42: required from ‘class Eigen::TranspositionsBase >’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpositions.h:158:7: required from ‘class Eigen::Transpositions<-1, -1, int>’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:280:23: required from ‘class Eigen::LDLT, 1>’ /usr/local/lib/R/site-library/StanHeaders/include/stan/math/prim/mat/err/check_pos_definite.hpp:41:19: required from here /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) long long int}’ [-Wignored-attributes] >::type PacketReturnType; ^~~~~~~~~~~~~~~~ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>, 0>’: /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase, 0>, 2>’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0> >’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0> >’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Diagonal.h:63:53: required from ‘class Eigen::Diagonal, 0>’ /usr/local/lib/R/site-library/StanHeaders/include/stan/math/prim/mat/err/check_pos_definite.hpp:43:33: required from here /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes] /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0> >, 0>’: /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase, 0> >, 2>’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0> > >’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase, 0> > >’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from ‘class Eigen::ArrayWrapper, 0> >’ /usr/local/lib/R/site-library/StanHeaders/include/stan/math/prim/mat/err/check_pos_definite.hpp:43:45: required from here /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes] /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Array >, 0>’: /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::Array > >’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase, Eigen::Array > >’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp, Eigen::Array >’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28: required from ‘struct Eigen::internal::traits, const Eigen::ArrayWrapper, 0> >, const Eigen::CwiseNullaryOp, Eigen::Array > > >’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::ArrayWrapper, 0> >, const Eigen::CwiseNullaryOp, Eigen::Array >, Eigen::Dense>’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, 0> >, const Eigen::CwiseNullaryOp, Eigen::Array > >’ /usr/local/lib/R/site-library/StanHeaders/include/stan/math/prim/mat/err/check_pos_definite.hpp:43:49: required from here /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes] In file included from /usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:28:0, from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/prim/mat/fun/LDLT_factor.hpp:7, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/prim/mat/err/check_ldlt_factor.hpp:6, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/prim/mat.hpp:26, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/mat.hpp:12, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/src/stan/model/model_header.hpp:4, from file1eb925e56a0d1.cpp:8: /usr/local/lib/R/site-library/BH/include/boost/smart_ptr/detail/shared_count.hpp:355:33: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] explicit shared_count( std::auto_ptr & r ): pi_( new sp_counted_impl_p( r.get() ) ) ^~~~~~~~ In file included from /usr/include/c++/6/bits/locale_conv.h:41:0, from /usr/include/c++/6/locale:43, from /usr/local/lib/R/site-library/BH/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:43, from /usr/local/lib/R/site-library/BH/include/boost/lexical_cast/detail/converter_lexical.hpp:54, from /usr/local/lib/R/site-library/BH/include/boost/lexical_cast/try_lexical_convert.hpp:42, from /usr/local/lib/R/site-library/BH/include/boost/lexical_cast.hpp:32, from /usr/local/lib/R/site-library/BH/include/boost/math/tools/convert_from_string.hpp:15, from /usr/local/lib/R/site-library/BH/include/boost/math/constants/constants.hpp:13, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/prim/scal/fun/constants.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/core/operator_unary_plus.hpp:7, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/core.hpp:36, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/mat.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/src/stan/model/model_header.hpp:4, from file1eb925e56a0d1.cpp:8: /usr/include/c++/6/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17:0, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/prim/mat/fun/LDLT_factor.hpp:7, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/prim/mat/err/check_ldlt_factor.hpp:6, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/prim/mat.hpp:26, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/mat.hpp:12, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/src/stan/model/model_header.hpp:4, from file1eb925e56a0d1.cpp:8: /usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:256:65: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] template< class T, class R > struct sp_enable_if_auto_ptr< std::auto_ptr< T >, R > ^~~~~~~~ In file included from /usr/include/c++/6/bits/locale_conv.h:41:0, from /usr/include/c++/6/locale:43, from /usr/local/lib/R/site-library/BH/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:43, from /usr/local/lib/R/site-library/BH/include/boost/lexical_cast/detail/converter_lexical.hpp:54, from /usr/local/lib/R/site-library/BH/include/boost/lexical_cast/try_lexical_convert.hpp:42, from /usr/local/lib/R/site-library/BH/include/boost/lexical_cast.hpp:32, from /usr/local/lib/R/site-library/BH/include/boost/math/tools/convert_from_string.hpp:15, from /usr/local/lib/R/site-library/BH/include/boost/math/constants/constants.hpp:13, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/prim/scal/fun/constants.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/core/operator_unary_plus.hpp:7, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/core.hpp:36, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/mat.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/src/stan/model/model_header.hpp:4, from file1eb925e56a0d1.cpp:8: /usr/include/c++/6/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17:0, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/prim/mat/fun/LDLT_factor.hpp:7, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/prim/mat/err/check_ldlt_factor.hpp:6, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/prim/mat.hpp:26, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/mat.hpp:12, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/src/stan/model/model_header.hpp:4, from file1eb925e56a0d1.cpp:8: /usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:471:31: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] explicit shared_ptr( std::auto_ptr & r ): px(r.get()), pn() ^~~~~~~~ In file included from /usr/include/c++/6/bits/locale_conv.h:41:0, from /usr/include/c++/6/locale:43, from /usr/local/lib/R/site-library/BH/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:43, from /usr/local/lib/R/site-library/BH/include/boost/lexical_cast/detail/converter_lexical.hpp:54, from /usr/local/lib/R/site-library/BH/include/boost/lexical_cast/try_lexical_convert.hpp:42, from /usr/local/lib/R/site-library/BH/include/boost/lexical_cast.hpp:32, from /usr/local/lib/R/site-library/BH/include/boost/math/tools/convert_from_string.hpp:15, from /usr/local/lib/R/site-library/BH/include/boost/math/constants/constants.hpp:13, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/prim/scal/fun/constants.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/core/operator_unary_plus.hpp:7, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/core.hpp:36, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/mat.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/src/stan/model/model_header.hpp:4, from file1eb925e56a0d1.cpp:8: /usr/include/c++/6/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from /usr/local/lib/R/site-library/BH/include/boost/shared_ptr.hpp:17:0, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/prim/mat/fun/LDLT_factor.hpp:7, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/prim/mat/err/check_ldlt_factor.hpp:6, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/prim/mat.hpp:26, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/mat.hpp:12, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/src/stan/model/model_header.hpp:4, from file1eb925e56a0d1.cpp:8: /usr/local/lib/R/site-library/BH/include/boost/smart_ptr/shared_ptr.hpp:567:34: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] shared_ptr & operator=( std::auto_ptr & r ) ^~~~~~~~ In file included from /usr/include/c++/6/bits/locale_conv.h:41:0, from /usr/include/c++/6/locale:43, from /usr/local/lib/R/site-library/BH/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:43, from /usr/local/lib/R/site-library/BH/include/boost/lexical_cast/detail/converter_lexical.hpp:54, from /usr/local/lib/R/site-library/BH/include/boost/lexical_cast/try_lexical_convert.hpp:42, from /usr/local/lib/R/site-library/BH/include/boost/lexical_cast.hpp:32, from /usr/local/lib/R/site-library/BH/include/boost/math/tools/convert_from_string.hpp:15, from /usr/local/lib/R/site-library/BH/include/boost/math/constants/constants.hpp:13, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/prim/scal/fun/constants.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/core/operator_unary_plus.hpp:7, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/core.hpp:36, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/mat.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/src/stan/model/model_header.hpp:4, from file1eb925e56a0d1.cpp:8: /usr/include/c++/6/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^~~~~~~~ In file included from /usr/local/lib/R/site-library/RcppEigen/include/Eigen/Core:430:0, from /usr/local/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/mat/fun/Eigen_NumTraits.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/core/matrix_vari.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/core.hpp:14, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math/rev/mat.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/stan/math.hpp:4, from /usr/local/lib/R/site-library/StanHeaders/include/src/stan/model/model_header.hpp:4, from file1eb925e56a0d1.cpp:8: /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase >, 0>’: /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase >, 2>’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase > >’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase > >’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from ‘class Eigen::TransposeImpl, Eigen::Dense>’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose >’ /usr/local/lib/R/site-library/StanHeaders/include/stan/math/prim/mat/fun/multiply_lower_tri_self_transpose.hpp:30:33: required from here /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes] >::type PacketReturnType; ^~~~~~~~~~~~~~~~ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, true>, 0>’: /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, true>, 1>’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, true>, 3>’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, true> >’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, 1, true> >’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, 1, true>, 0>’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:215:34: required from ‘class Eigen::MapBase, -1, 1, true>, 1>’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, -1, 1, true, true>’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl, -1, 1, true, Eigen::Dense>’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block, -1, 1, true>’ /usr/local/lib/R/site-library/StanHeaders/include/stan/math/prim/mat/fun/multiply_lower_tri_self_transpose.hpp:33:29: required from here /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes] /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false>, 0>’: /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false>, 1>’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false>, 3>’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, true>, -1, 1, false> >’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, 1, true>, -1, 1, false> >’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, 1, true>, -1, 1, false>, 0>’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:215:34: required from ‘class Eigen::MapBase, -1, 1, true>, -1, 1, false>, 1>’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, -1, 1, true>, -1, 1, false, true>’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl, -1, 1, true>, -1, 1, false, Eigen::Dense>’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block, -1, 1, true>, -1, 1, false>’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/VectorBlock.h:56:47: required from ‘class Eigen::VectorBlock, -1, 1, true>, -1>’ /usr/local/lib/R/site-library/StanHeaders/include/stan/math/prim/mat/fun/multiply_lower_tri_self_transpose.hpp:33:37: required from here /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes] /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Transpose >, 0>, 0>’: /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::Transpose >, 0> >’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::Transpose >, 0> >’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from ‘class Eigen::internal::dense_product_base, Eigen::Transpose >, 0, 8>’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from ‘class Eigen::ProductImpl, Eigen::Transpose >, 0, Eigen::Dense>’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, Eigen::Transpose >, 0>’ /usr/local/lib/R/site-library/StanHeaders/include/stan/math/prim/mat/fun/tcrossprod.hpp:21:34: required from here /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes] /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ /usr/local/lib/R/site-library/StanHeaders/include/stan/math/prim/mat/fun/to_row_vector.hpp:30:46: required from here /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes] /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>’: /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::Matrix > >’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::Matrix > >’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp, Eigen::Matrix >’ /usr/local/lib/R/site-library/StanHeaders/include/stan/math/prim/mat/fun/welford_covar_estimator.hpp:14:41: required from here /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes] /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix, const Eigen::Matrix >, 0>’: /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Matrix, const Eigen::Matrix > >’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Matrix, const Eigen::Matrix > >’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Matrix, const Eigen::Matrix, Eigen::Dense>’ /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix >’ /usr/local/lib/R/site-library/StanHeaders/include/stan/math/prim/mat/fun/welford_covar_estimator.hpp:27:35: required from here /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type {aka __vector(2) double}’ [-Wignored-attributes] /usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 0>’: