SCUBA
Input saved to /scratch/irc/personal/robrechtc/tmp//RtmpG0rSCv/input:
expression.csv
params.json
Traceback (most recent call last):
File "/code/run.py", line 37, in
low_gene_fraction_max=p["low_gene_fraction_max"])
File "/usr/local/lib/python3.6/site-packages/PySCUBA/Preprocessing.py", line 780, in RNASeq_preprocess
data_tag, output_directory = create_output_directory(file_path)
File "/usr/local/lib/python3.6/site-packages/PySCUBA/Preprocessing.py", line 823, in create_output_directory
makedirs(output_directory)
File "/usr/local/lib/python3.6/os.py", line 220, in makedirs
mkdir(name, mode)
PermissionError: [Errno 13] Permission denied: '/SCUBA_analysis_of_expression'
Input saved to /scratch/irc/personal/robrechtc/tmp//Rtmp3Lu5Gq/input:
expression.csv
params.json
Traceback (most recent call last):
File "/code/run.py", line 37, in
low_gene_fraction_max=p["low_gene_fraction_max"])
File "/usr/local/lib/python3.6/site-packages/PySCUBA/Preprocessing.py", line 780, in RNASeq_preprocess
data_tag, output_directory = create_output_directory(file_path)
File "/usr/local/lib/python3.6/site-packages/PySCUBA/Preprocessing.py", line 823, in create_output_directory
makedirs(output_directory)
File "/usr/local/lib/python3.6/os.py", line 220, in makedirs
mkdir(name, mode)
PermissionError: [Errno 13] Permission denied: '/SCUBA_analysis_of_expression'
Input saved to /scratch/irc/personal/robrechtc/tmp//RtmpvmAXIq/input:
expression.csv
params.json
Traceback (most recent call last):
File "/code/run.py", line 37, in
low_gene_fraction_max=p["low_gene_fraction_max"])
File "/usr/local/lib/python3.6/site-packages/PySCUBA/Preprocessing.py", line 780, in RNASeq_preprocess
data_tag, output_directory = create_output_directory(file_path)
File "/usr/local/lib/python3.6/site-packages/PySCUBA/Preprocessing.py", line 823, in create_output_directory
makedirs(output_directory)
File "/usr/local/lib/python3.6/os.py", line 220, in makedirs
mkdir(name, mode)
PermissionError: [Errno 13] Permission denied: '/SCUBA_analysis_of_expression'
Input saved to /scratch/irc/personal/robrechtc/tmp//RtmpgjmChQ/input:
expression.csv
params.json
Traceback (most recent call last):
File "/code/run.py", line 37, in
low_gene_fraction_max=p["low_gene_fraction_max"])
File "/usr/local/lib/python3.6/site-packages/PySCUBA/Preprocessing.py", line 780, in RNASeq_preprocess
data_tag, output_directory = create_output_directory(file_path)
File "/usr/local/lib/python3.6/site-packages/PySCUBA/Preprocessing.py", line 823, in create_output_directory
makedirs(output_directory)
File "/usr/local/lib/python3.6/os.py", line 220, in makedirs
mkdir(name, mode)
PermissionError: [Errno 13] Permission denied: '/SCUBA_analysis_of_expression'
Input saved to /scratch/irc/personal/robrechtc/tmp//RtmpEqNpPZ/input:
expression.csv
params.json
Traceback (most recent call last):
File "/code/run.py", line 37, in
low_gene_fraction_max=p["low_gene_fraction_max"])
File "/usr/local/lib/python3.6/site-packages/PySCUBA/Preprocessing.py", line 780, in RNASeq_preprocess
data_tag, output_directory = create_output_directory(file_path)
File "/usr/local/lib/python3.6/site-packages/PySCUBA/Preprocessing.py", line 823, in create_output_directory
makedirs(output_directory)
File "/usr/local/lib/python3.6/os.py", line 220, in makedirs
mkdir(name, mode)
PermissionError: [Errno 13] Permission denied: '/SCUBA_analysis_of_expression'
Part of 